Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN41902


BLASTX 7.6.2

Query= UN41902 /QuerySize=819
        (818 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G55530.1 | Symbols: SDIR1 | SDIR1 (SALT- AND D...    315   2e-086

>TAIR9_protein||AT3G55530.1 | Symbols: SDIR1 | SDIR1 (SALT- AND DROUGHT-INDUCED
        RING FINGER1); protein binding / ubiquitin-protein ligase/ zinc ion
        binding | chr3:20595300-20597188 REVERSE

          Length = 274

 Score =  315 bits (807), Expect = 2e-086
 Identities = 170/213 (79%), Positives = 178/213 (83%), Gaps = 7/213 (3%)
 Frame = -2

Query: 649 MSFVFRGSRGDLESGFS-GFIPERRAMRVHGARPVNSNSLAFLVTVLLLFMILNSHQMPP 473
           MSFVFRGSRGDLESGFS GF+PERRAMRVHGARPVNSNSLAFLVTVLLLFMILNSHQMPP
Sbjct:   1 MSFVFRGSRGDLESGFSGGFLPERRAMRVHGARPVNSNSLAFLVTVLLLFMILNSHQMPP 60

Query: 472 NFLLWLVLGVFLMATTLRMYATCQQLQAQAQAHVAAASGLFSHTELRLHVPPSIALATRG 293
           NFLLWLVLGVFLMATTLRMYATCQQLQA AQA  AAASGLFSHTELRLHVPPSIALATRG
Sbjct:  61 NFLLWLVLGVFLMATTLRMYATCQQLQAHAQAQAAAASGLFSHTELRLHVPPSIALATRG 120

Query: 292 RLQGLRLQLALLDREFDNLDYETLRALDSDNVPTNSMSEEEINALPVRKYK------SCT 131
           RLQGLRLQLALLDREFD+LDYETLRALDSDNV T SMSEEEINALPV KYK       C+
Sbjct: 121 RLQGLRLQLALLDREFDDLDYETLRALDSDNVSTTSMSEEEINALPVHKYKVLDPENGCS 180

Query: 130 LKMVPL*QSSINLILSGESRSVSASKKTETSSL 32
           L       SS   +L   + S   ++   T S+
Sbjct: 181 LAKQASTSSSAEKMLDSANESKKGTEDELTCSV 213

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,662,425,717
Number of Sequences: 33410
Number of Extensions: 20662425717
Number of Successful Extensions: 658803642
Number of sequences better than 0.0: 0