BLASTX 7.6.2
Query= UN41985 /QuerySize=1421
(1420 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G24800.1 | Symbols: | CONTAINS InterPro DOMAI... 255 8e-068
TAIR9_protein||AT1G25211.1 | Symbols: | CONTAINS InterPro DOMAI... 255 8e-068
TAIR9_protein||AT1G24881.1 | Symbols: | CONTAINS InterPro DOMAI... 255 8e-068
TAIR9_protein||AT1G25055.1 | Symbols: | CONTAINS InterPro DOMAI... 255 8e-068
TAIR9_protein||AT1G25141.1 | Symbols: | UDP-3-0-acyl N-acetylgl... 250 3e-066
TAIR9_protein||AT3G13680.1 | Symbols: | F-box family protein | ... 164 1e-040
TAIR9_protein||AT3G24580.1 | Symbols: | F-box family protein | ... 132 6e-031
TAIR9_protein||AT3G49510.1 | Symbols: | F-box family protein | ... 132 8e-031
TAIR9_protein||AT5G42460.1 | Symbols: | FUNCTIONS IN: molecular... 121 2e-027
TAIR9_protein||AT1G54550.1 | Symbols: | F-box family protein | ... 118 1e-026
TAIR9_protein||AT2G17830.1 | Symbols: | F-box family protein | ... 116 4e-026
TAIR9_protein||AT5G51000.1 | Symbols: | F-box family protein | ... 111 1e-024
TAIR9_protein||AT4G17200.1 | Symbols: | F-box family protein | ... 90 3e-018
TAIR9_protein||AT3G19890.1 | Symbols: | F-box family protein | ... 89 8e-018
>TAIR9_protein||AT1G24800.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1 (InterPro:IPR017451);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G25211.1); Has 745 Blast hits to 722 proteins in 30 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:8769741-8771042
FORWARD
Length = 434
Score = 255 bits (649), Expect = 8e-068
Identities = 165/379 (43%), Positives = 222/379 (58%), Gaps = 46/379 (12%)
Frame = +3
Query: 87 AAQQPQQFLTMNAKLYSL-------ERFQEDFADVSVKEVDLLKELEVSKVYHCDGLVLC 245
AA Q F+TM++K+ S+ + +ED D+S+K+VDLL ++E+S+VYHCDGL+LC
Sbjct: 68 AAAQFLGFMTMDSKVCSVRFHLRRSKEEEEDTMDLSIKQVDLLNQVEISRVYHCDGLLLC 127
Query: 246 VAKDKKEEPKLVLWNPYLCQTRWIEPRVEFNKNNRFAIGSDDERNHKIMRLVDAYTSGPE 425
VAKD ++V+WNPYL QTRWI PR E N + +A+G D RNHKI+R+V +
Sbjct: 128 VAKDNS---RVVVWNPYLGQTRWIRPRTESNIGDSYALGYDINRNHKILRMV-------Q 177
Query: 426 ERKHEVV-CEIYEIRSNSWRVLDVVKDNSKWSIDMDQRGVSVKGNTYFFAHH---LAERV 593
R V EIY++RSNSWRVL+V N + + GVSVKGNTYFFAH E
Sbjct: 178 TRNVSVYRYEIYDLRSNSWRVLEVT-PNGEMDPNHPLYGVSVKGNTYFFAHEDSSSGEID 236
Query: 594 FRGLVLKQEEIFLICFDFAKERFGPRLPFPFDSFDGFNGDLVTLSSFVSGGGGGDEQLAV 773
G ++ E+ FL+CFDF E FG RLP PF S T+ + V+ D+QLAV
Sbjct: 237 EDGDIIDLED-FLLCFDFTTETFGLRLPLPFHS---------TIDATVTLSCVRDQQLAV 286
Query: 774 LF---GGYESGFF---EIWVTLTVDPNGASCSKFLRMEPGPFCSYGFQLYPSSGGSFLVD 935
L+ G + F E WVT +++PN S SKFL ++ P G + G +F +D
Sbjct: 287 LYHNEGLHSDDRFTTVEFWVTTSIEPNSVSWSKFLTVDMRPLALTGVRFDNDMGATFFID 346
Query: 936 EDNKLAVLFELD-----ETQTTHKAFVFGQDGSFKSSVSLGQALLLEN--RSYNKLYKAA 1094
ED K+AV+F+LD E+ H AF+ G+DG FK V+LG A + +
Sbjct: 347 EDEKVAVVFDLDGYLSTESARYHTAFISGKDGFFK-PVTLGVAPNVGEPCPRTGHIPTTY 405
Query: 1095 RPPLVCSSPYRPSSVQLNQ 1151
RPPLVCSS Y PS VQ+NQ
Sbjct: 406 RPPLVCSSTYLPSLVQVNQ 424
>TAIR9_protein||AT1G25211.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1 (InterPro:IPR017451);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G25055.1); Has 745 Blast hits to 722 proteins in 30 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:8835405-8836706
FORWARD
Length = 434
Score = 255 bits (649), Expect = 8e-068
Identities = 165/379 (43%), Positives = 222/379 (58%), Gaps = 46/379 (12%)
Frame = +3
Query: 87 AAQQPQQFLTMNAKLYSL-------ERFQEDFADVSVKEVDLLKELEVSKVYHCDGLVLC 245
AA Q F+TM++K+ S+ + +ED D+S+K+VDLL ++E+S+VYHCDGL+LC
Sbjct: 68 AAAQFLGFMTMDSKVCSVRFHLRRSKEEEEDTMDLSIKQVDLLNQVEISRVYHCDGLLLC 127
Query: 246 VAKDKKEEPKLVLWNPYLCQTRWIEPRVEFNKNNRFAIGSDDERNHKIMRLVDAYTSGPE 425
VAKD ++V+WNPYL QTRWI PR E N + +A+G D RNHKI+R+V +
Sbjct: 128 VAKDNS---RVVVWNPYLGQTRWIRPRTESNIGDSYALGYDINRNHKILRMV-------Q 177
Query: 426 ERKHEVV-CEIYEIRSNSWRVLDVVKDNSKWSIDMDQRGVSVKGNTYFFAHH---LAERV 593
R V EIY++RSNSWRVL+V N + + GVSVKGNTYFFAH E
Sbjct: 178 TRNVSVYRYEIYDLRSNSWRVLEVT-PNGEMDPNHPLYGVSVKGNTYFFAHEDSSSGEID 236
Query: 594 FRGLVLKQEEIFLICFDFAKERFGPRLPFPFDSFDGFNGDLVTLSSFVSGGGGGDEQLAV 773
G ++ E+ FL+CFDF E FG RLP PF S T+ + V+ D+QLAV
Sbjct: 237 EDGDIIDLED-FLLCFDFTTETFGLRLPLPFHS---------TIDATVTLSCVRDQQLAV 286
Query: 774 LF---GGYESGFF---EIWVTLTVDPNGASCSKFLRMEPGPFCSYGFQLYPSSGGSFLVD 935
L+ G + F E WVT +++PN S SKFL ++ P G + G +F +D
Sbjct: 287 LYHNEGLHSDDRFTTVEFWVTTSIEPNSVSWSKFLTVDMRPLALTGVRFDNDMGATFFID 346
Query: 936 EDNKLAVLFELD-----ETQTTHKAFVFGQDGSFKSSVSLGQALLLEN--RSYNKLYKAA 1094
ED K+AV+F+LD E+ H AF+ G+DG FK V+LG A + +
Sbjct: 347 EDEKVAVVFDLDGYLSTESARYHTAFISGKDGFFK-PVTLGVAPNVGEPCPRTGHIPTTY 405
Query: 1095 RPPLVCSSPYRPSSVQLNQ 1151
RPPLVCSS Y PS VQ+NQ
Sbjct: 406 RPPLVCSSTYLPSLVQVNQ 424
>TAIR9_protein||AT1G24881.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1 (InterPro:IPR017451);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G25211.1); Has 745 Blast hits to 722 proteins in 30 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:8784120-8785421
FORWARD
Length = 434
Score = 255 bits (649), Expect = 8e-068
Identities = 165/379 (43%), Positives = 222/379 (58%), Gaps = 46/379 (12%)
Frame = +3
Query: 87 AAQQPQQFLTMNAKLYSL-------ERFQEDFADVSVKEVDLLKELEVSKVYHCDGLVLC 245
AA Q F+TM++K+ S+ + +ED D+S+K+VDLL ++E+S+VYHCDGL+LC
Sbjct: 68 AAAQFLGFMTMDSKVCSVRFHLRRSKEEEEDTMDLSIKQVDLLNQVEISRVYHCDGLLLC 127
Query: 246 VAKDKKEEPKLVLWNPYLCQTRWIEPRVEFNKNNRFAIGSDDERNHKIMRLVDAYTSGPE 425
VAKD ++V+WNPYL QTRWI PR E N + +A+G D RNHKI+R+V +
Sbjct: 128 VAKDNS---RVVVWNPYLGQTRWIRPRTESNIGDSYALGYDINRNHKILRMV-------Q 177
Query: 426 ERKHEVV-CEIYEIRSNSWRVLDVVKDNSKWSIDMDQRGVSVKGNTYFFAHH---LAERV 593
R V EIY++RSNSWRVL+V N + + GVSVKGNTYFFAH E
Sbjct: 178 TRNVSVYRYEIYDLRSNSWRVLEVT-PNGEMDPNHPLYGVSVKGNTYFFAHEDSSSGEID 236
Query: 594 FRGLVLKQEEIFLICFDFAKERFGPRLPFPFDSFDGFNGDLVTLSSFVSGGGGGDEQLAV 773
G ++ E+ FL+CFDF E FG RLP PF S T+ + V+ D+QLAV
Sbjct: 237 EDGDIIDLED-FLLCFDFTTETFGLRLPLPFHS---------TIDATVTLSCVRDQQLAV 286
Query: 774 LF---GGYESGFF---EIWVTLTVDPNGASCSKFLRMEPGPFCSYGFQLYPSSGGSFLVD 935
L+ G + F E WVT +++PN S SKFL ++ P G + G +F +D
Sbjct: 287 LYHNEGLHSDDRFTTVEFWVTTSIEPNSVSWSKFLTVDMRPLALTGVRFDNDMGATFFID 346
Query: 936 EDNKLAVLFELD-----ETQTTHKAFVFGQDGSFKSSVSLGQALLLEN--RSYNKLYKAA 1094
ED K+AV+F+LD E+ H AF+ G+DG FK V+LG A + +
Sbjct: 347 EDEKVAVVFDLDGYLSTESARYHTAFISGKDGFFK-PVTLGVAPNVGEPCPRTGHIPTTY 405
Query: 1095 RPPLVCSSPYRPSSVQLNQ 1151
RPPLVCSS Y PS VQ+NQ
Sbjct: 406 RPPLVCSSTYLPSLVQVNQ 424
>TAIR9_protein||AT1G25055.1 | Symbols: | CONTAINS InterPro DOMAIN/s:
Cyclin-like F-box (InterPro:IPR001810), F-box associated
(InterPro:IPR006527), F-box associated type 1 (InterPro:IPR017451);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G25211.1); Has 745 Blast hits to 722 proteins in 30 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 743; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:8806649-8807950
FORWARD
Length = 434
Score = 255 bits (649), Expect = 8e-068
Identities = 165/379 (43%), Positives = 222/379 (58%), Gaps = 46/379 (12%)
Frame = +3
Query: 87 AAQQPQQFLTMNAKLYSL-------ERFQEDFADVSVKEVDLLKELEVSKVYHCDGLVLC 245
AA Q F+TM++K+ S+ + +ED D+S+K+VDLL ++E+S+VYHCDGL+LC
Sbjct: 68 AAAQFLGFMTMDSKVCSVRFHLRRSKEEEEDTMDLSIKQVDLLNQVEISRVYHCDGLLLC 127
Query: 246 VAKDKKEEPKLVLWNPYLCQTRWIEPRVEFNKNNRFAIGSDDERNHKIMRLVDAYTSGPE 425
VAKD ++V+WNPYL QTRWI PR E N + +A+G D RNHKI+R+V +
Sbjct: 128 VAKDNS---RVVVWNPYLGQTRWIRPRTESNIGDSYALGYDINRNHKILRMV-------Q 177
Query: 426 ERKHEVV-CEIYEIRSNSWRVLDVVKDNSKWSIDMDQRGVSVKGNTYFFAHH---LAERV 593
R V EIY++RSNSWRVL+V N + + GVSVKGNTYFFAH E
Sbjct: 178 TRNVSVYRYEIYDLRSNSWRVLEVT-PNGEMDPNHPLYGVSVKGNTYFFAHEDSSSGEID 236
Query: 594 FRGLVLKQEEIFLICFDFAKERFGPRLPFPFDSFDGFNGDLVTLSSFVSGGGGGDEQLAV 773
G ++ E+ FL+CFDF E FG RLP PF S T+ + V+ D+QLAV
Sbjct: 237 EDGDIIDLED-FLLCFDFTTETFGLRLPLPFHS---------TIDATVTLSCVRDQQLAV 286
Query: 774 LF---GGYESGFF---EIWVTLTVDPNGASCSKFLRMEPGPFCSYGFQLYPSSGGSFLVD 935
L+ G + F E WVT +++PN S SKFL ++ P G + G +F +D
Sbjct: 287 LYHNEGLHSDDRFTTVEFWVTTSIEPNSVSWSKFLTVDMRPLALTGVRFDNDMGATFFID 346
Query: 936 EDNKLAVLFELD-----ETQTTHKAFVFGQDGSFKSSVSLGQALLLEN--RSYNKLYKAA 1094
ED K+AV+F+LD E+ H AF+ G+DG FK V+LG A + +
Sbjct: 347 EDEKVAVVFDLDGYLSTESARYHTAFISGKDGFFK-PVTLGVAPNVGEPCPRTGHIPTTY 405
Query: 1095 RPPLVCSSPYRPSSVQLNQ 1151
RPPLVCSS Y PS VQ+NQ
Sbjct: 406 RPPLVCSSTYLPSLVQVNQ 424
>TAIR9_protein||AT1G25141.1 | Symbols: | UDP-3-0-acyl N-acetylglucosamine
deacetylase family protein / F-box protein-related |
chr1:8817678-8822328 FORWARD
Length = 926
Score = 250 bits (636), Expect = 3e-066
Identities = 157/351 (44%), Positives = 208/351 (59%), Gaps = 39/351 (11%)
Frame = +3
Query: 150 QEDFADVSVKEVDLLKELEVSKVYHCDGLVLCVAKDKKEEPKLVLWNPYLCQTRWIEPRV 329
+ED D+S+K+VDLL ++E+S+VYHCDGL+LCVAKD ++V+WNPYL QTRWI PR
Sbjct: 588 EEDTMDLSIKQVDLLNQVEISRVYHCDGLLLCVAKDNS---RVVVWNPYLGQTRWIRPRT 644
Query: 330 EFNKNNRFAIGSDDERNHKIMRLVDAYTSGPEERKHEVV-CEIYEIRSNSWRVLDVVKDN 506
E N + +A+G D RNHKI+R+V + R V EIY++RSNSWRVL+V N
Sbjct: 645 ESNIGDSYALGYDINRNHKILRMV-------QTRNVSVYRYEIYDLRSNSWRVLEVT-PN 696
Query: 507 SKWSIDMDQRGVSVKGNTYFFAHH---LAERVFRGLVLKQEEIFLICFDFAKERFGPRLP 677
+ + GVSVKGNTYFFAH E G ++ E+ FL+CFDF E FG RLP
Sbjct: 697 GEMDPNHPLYGVSVKGNTYFFAHEDSSSGEIDEDGDIIDLED-FLLCFDFTTETFGLRLP 755
Query: 678 FPFDSFDGFNGDLVTLSSFVSGGGGGDEQLAVLF---GGYESGFF---EIWVTLTVDPNG 839
PF S T+ + V+ D+QLAVL+ G + F E WVT +++PN
Sbjct: 756 LPFHS---------TIDATVTLSCVRDQQLAVLYHNEGLHSDDRFTTVEFWVTTSIEPNS 806
Query: 840 ASCSKFLRMEPGPFCSYGFQLYPSSGGSFLVDEDNKLAVLFELD-----ETQTTHKAFVF 1004
S SKFL ++ P G + G +F +DED K+AV+F+LD E+ H AF+
Sbjct: 807 VSWSKFLTVDMRPLALTGVRFDNDMGATFFIDEDEKVAVVFDLDGYLSTESARYHTAFIS 866
Query: 1005 GQDGSFKSSVSLGQALLLEN--RSYNKLYKAARPPLVCSSPYRPSSVQLNQ 1151
G+DG FK V+LG A + + RPPLVCSS Y PS VQ+NQ
Sbjct: 867 GKDGFFK-PVTLGVAPNVGEPCPRTGHIPTTYRPPLVCSSTYLPSLVQVNQ 916
>TAIR9_protein||AT3G13680.1 | Symbols: | F-box family protein |
chr3:4477534-4478721 REVERSE
Length = 396
Score = 164 bits (414), Expect = 1e-040
Identities = 90/220 (40%), Positives = 130/220 (59%), Gaps = 19/220 (8%)
Frame = +3
Query: 60 KLVGEKKEAAAQQPQQFLTMNAKL----YSLERFQED---FADVSVKEVDLLKELEVSKV 218
++ G K AA + F+ ++++ + L+ + D + S+K+V L ++EVS+V
Sbjct: 41 QICGRKATAAENKFLGFMMKDSRVCSMKFDLQGIRNDDGELVEPSIKQVSKLDQIEVSQV 100
Query: 219 YHCDGLVLCVAKDKKEEPKLVLWNPYLCQTRWIEPRVEFNKNNRFAIGSDDERNHKIMRL 398
+HCDGLVLC+ KD L++WNPYL QTRWI PR + +R+A+G D+ RNHKI+R+
Sbjct: 101 FHCDGLVLCIIKD---NTGLLVWNPYLGQTRWIHPRNNYQIEDRYALGYDNNRNHKILRI 157
Query: 399 VDAYTSGPEERKHEVVCEIYEIRSNSWRVLDVVKDNSKWSIDMDQRGVSVKGNTYFFAHH 578
D Y S +EV Y+ SNSW+VLDV+ + W I RG S+KGN YF A
Sbjct: 158 FDLYPSSNRVFGYEV----YDFSSNSWKVLDVIPE---WDIQSHFRGASLKGNAYFPAQ- 209
Query: 579 LAERVFRGLVLKQEEIFLICFDFAKERFGPRLPFPFDSFD 698
+ G+ E L+CFDF +ERFGP LP PF S++
Sbjct: 210 -KKETVGGIKTINIEDVLLCFDFTRERFGPPLPLPFHSYN 248
>TAIR9_protein||AT3G24580.1 | Symbols: | F-box family protein |
chr3:8969162-8970298 FORWARD
Length = 379
Score = 132 bits (331), Expect = 6e-031
Identities = 77/173 (44%), Positives = 104/173 (60%), Gaps = 25/173 (14%)
Frame = +3
Query: 183 VDLLKELEVSKVYHCDGLVLCVAKDKKEEPKLVLWNPYLCQTRWIEPRVEFNKNN--RFA 356
+ L E++VS+V+HCDGL+LC+ +D ++ K+VLWNPY QTRWIE F+K + +A
Sbjct: 93 ISLGDEVDVSQVFHCDGLLLCITEDNEDNAKVVLWNPYWGQTRWIESTNNFHKLDMYTYA 152
Query: 357 IG----SDDERNHKIMRLVDAYTSGPEERKHEVVCEIYEIRSNSWRVLDVVKDNSKWSID 524
+G S R++KI+R +D + E +IY I S+SW+VLDV D W ID
Sbjct: 153 LGYKKSSKSSRSYKILRFIDFSPTCSE-------FKIYNINSDSWKVLDVSPD---WKID 202
Query: 525 MDQRGVSVKGNTYFFAHHLAERVFRGLVLKQEEIFLICFDFAKERFGPRLPFP 683
RGVS+KGNTY+ A ER G FL+CFDF +ERF RLP P
Sbjct: 203 SYIRGVSLKGNTYWIAR---ERHGYG------HTFLVCFDFTRERFRSRLPLP 246
>TAIR9_protein||AT3G49510.1 | Symbols: | F-box family protein |
chr3:18353891-18356508 FORWARD
Length = 663
Score = 132 bits (330), Expect = 8e-031
Identities = 67/149 (44%), Positives = 94/149 (63%), Gaps = 11/149 (7%)
Frame = +3
Query: 150 QEDFADVSVKEVDLLK---ELEVSKVYHCDGLVLCVAKDKKEEPKLVLWNPYLCQTRWIE 320
+EDF D S+K + + ++E+S+VYHCDGL+LC+A KE + +WNPYL QT+WI
Sbjct: 78 KEDFVDPSMKLISIPSNDDQVEISQVYHCDGLLLCIA---KENSNVFVWNPYLGQTKWIR 134
Query: 321 PRVEFNKNNRFAIGSDDERNHKIMRLVDAYTSGPEERKHEVVCEIYEIRSNSWRVLDVVK 500
PR F++ +RFA+G D+ RNHKI+R + Y E ++Y+ S+SWRVLDV
Sbjct: 135 PRNTFHRYDRFALGYDNNRNHKILRFL--YDEESNESSRRTHIDVYDFSSDSWRVLDV-- 190
Query: 501 DNSKWSIDMDQRGVSVKGNTYFFAHHLAE 587
N I Q GVS+KGNTYFF + +
Sbjct: 191 -NPDCDIPFYQTGVSLKGNTYFFGQEVTQ 218
Score = 114 bits (285), Expect = 1e-025
Identities = 72/168 (42%), Positives = 96/168 (57%), Gaps = 16/168 (9%)
Frame = +3
Query: 237 VLCVAKDKKEEPKLVLWNPYLCQTRWIEPRVEFNKNNRFAIGSDDERNHKIMR-LVDA-- 407
+LC+A+D LV+WNPYLCQT+WI R F++ + FA+G D+ RNHKI+R L DA
Sbjct: 379 LLCIAEDNS---GLVVWNPYLCQTKWIRLRNTFHRYDVFALGHDNNRNHKILRFLYDAKK 435
Query: 408 YTSGPEERKHEVVCEIYEIRSNSW-RVLDVVKDNSKWSIDMDQRGVSVKGNTYFFAHHLA 584
Y +G ++Y+ S+SW RV DV N GVS+KGN+YFF +
Sbjct: 436 YRTGRGRDN-----DVYDFSSDSWRRVFDV---NPHRGELFYYSGVSLKGNSYFFGQEVT 487
Query: 585 ERVFRGLVLKQEEIFLICFDFAKERFGPRLPFPFDSFDGFNGDLVTLS 728
V+ Q +L+CFDF ERFGPRL PF+ N D +TLS
Sbjct: 488 IEEEEEEVISQPRDYLLCFDFTTERFGPRLSLPFNP-PSPNFDYLTLS 534
>TAIR9_protein||AT5G42460.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cyclin-like
F-box (InterPro:IPR001810), F-box associated (InterPro:IPR006527),
F-box associated type 1 (InterPro:IPR017451); BEST Arabidopsis thaliana
protein match is: F-box family protein (TAIR:AT2G17830.1); Has 799
Blast hits to 768 proteins in 36 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 797; Viruses - 0; Other Eukaryotes - 2
(source: NCBI BLink). | chr5:16979773-16980939 FORWARD
Length = 389
Score = 121 bits (301), Expect = 2e-027
Identities = 62/123 (50%), Positives = 86/123 (69%), Gaps = 9/123 (7%)
Frame = +3
Query: 207 VSKVYHCDGLVLCVAKDKKEEPKLVLWNPYLCQTRWIEPRVEFNKNNRFAIGSDDERNHK 386
VS+V+HCDGL+LC+ KD +LV+WNPY QTRWI+PR +++ + +A+G D+++NHK
Sbjct: 107 VSRVFHCDGLLLCITKDL--HYRLVVWNPYFGQTRWIQPRNSYHRKDNYALGYDEKKNHK 164
Query: 387 IMRLVDAYTSGPEERKHEVVCEIYEIRSNSWR-VLDVVKDNSKWSIDMDQRGVSVKGNTY 563
I+RL D Y + P ER E E+Y SNSW+ VLDV D W I RG+S+KGNTY
Sbjct: 165 ILRLKDNYYA-PRERICEF--ELYSFESNSWKVVLDVSPD---WYIPSYNRGLSLKGNTY 218
Query: 564 FFA 572
++A
Sbjct: 219 WYA 221
>TAIR9_protein||AT1G54550.1 | Symbols: | F-box family protein |
chr1:20369689-20370777 FORWARD
Length = 363
Score = 118 bits (294), Expect = 1e-026
Identities = 59/149 (39%), Positives = 98/149 (65%), Gaps = 18/149 (12%)
Frame = +3
Query: 75 KKEAAAQQPQQFLTMNAKLYSLE------RFQEDFADVSVKEVDL---LKELEVSKVYHC 227
KK AA Q +F+ ++++ SL R +ED D+S+K++ + + ++E+S+VYHC
Sbjct: 45 KKAAAKNQFLEFMVTDSRVCSLRLDLQGIRSEEDLIDLSIKQISIPNKVDQVEISQVYHC 104
Query: 228 DGLVLCVAKDKKEEPKLVLWNPYLCQTRWIEPRVEFNKNNRFAIGSDDERNHKIMRLVDA 407
DGL+LC+AKD +++WNPYL QT+ I+PR + ++ ++FA+G D+ RNHKI+R +
Sbjct: 105 DGLLLCIAKDNS---SVMVWNPYLGQTKLIQPRKKLHRYDKFALGYDNNRNHKILRFL-- 159
Query: 408 YTSGPEERKHEVVCEIYEIRSNSWRVLDV 494
Y P V+ ++Y+ S+SWRVLD+
Sbjct: 160 YEGSP----RNVIIDVYDFSSDSWRVLDI 184
>TAIR9_protein||AT2G17830.1 | Symbols: | F-box family protein |
chr2:7754261-7755445 FORWARD
Length = 395
Score = 116 bits (290), Expect = 4e-026
Identities = 64/126 (50%), Positives = 82/126 (65%), Gaps = 11/126 (8%)
Frame = +3
Query: 207 VSKVYHCDGLVLCVAKDKKEEPKLVLWNPYLCQTRWIEPRVEFNKNNRFAIGSDDERNHK 386
VS V+HCDGL+LC+ KD +LV+WNPY QTRWI+PR ++ + +AIG D+ +NHK
Sbjct: 107 VSSVFHCDGLLLCITKDLNF--RLVVWNPYFGQTRWIQPRNSYHIKDIYAIGYDENKNHK 164
Query: 387 IMRLVDA---YTSGPEERKHEVVCEIYEIRSNSWR-VLDVVKDNSKWSIDMDQRGVSVKG 554
I+RL D Y S P R E E+Y SNSW+ VLDV D W I RG+SVKG
Sbjct: 165 ILRLKDQYYDYDSHPRARICEF--ELYSFESNSWKVVLDVSPD---WYIHSYHRGLSVKG 219
Query: 555 NTYFFA 572
NTY++A
Sbjct: 220 NTYWYA 225
>TAIR9_protein||AT5G51000.1 | Symbols: | F-box family protein |
chr5:20742533-20743669 REVERSE
Length = 379
Score = 111 bits (277), Expect = 1e-024
Identities = 65/180 (36%), Positives = 96/180 (53%), Gaps = 25/180 (13%)
Frame = +3
Query: 78 KEAAAQQPQQFLTMNAKLYSLE-RFQEDFADVSVKEVDLLKELEVSKVYHCDGLVLCVAK 254
KEA Q + A L S+ +D AD S+K++ L ++E+ V+HCDGL+L +
Sbjct: 50 KEAKEIQVIMICDLKACLMSVNLHNHKDLADPSIKQIGKLNQVEIDSVFHCDGLLLLLLC 109
Query: 255 DKKEEPKLVLWNPYLCQTRWIEPRVEFNKN-----------NRFAIGSDDERNHKIMRLV 401
+ K+ KL++WNPYL QTRWI+PR +K+ RF +G D NHKI+
Sbjct: 110 NPKDNSKLMVWNPYLGQTRWIQPRNNSHKHRPAGRFNHRPAGRFYMGYDSNNNHKILWFS 169
Query: 402 DAYTSGPEERKHEVVCEIYEIRSNSWRVLDVVKDNSKWSIDMDQRGVSVKGNTYFFAHHL 581
Y EIY+ +S++W V+DV N+ +D + VS+KGN YF AH +
Sbjct: 170 SMYRE----------YEIYDFKSDAWTVIDV---NTDQDHIIDNQRVSLKGNVYFIAHDI 216
>TAIR9_protein||AT4G17200.1 | Symbols: | F-box family protein |
chr4:9651108-9652253 FORWARD
Length = 382
Score = 90 bits (222), Expect = 3e-018
Identities = 47/115 (40%), Positives = 72/115 (62%), Gaps = 10/115 (8%)
Frame = +3
Query: 81 EAAAQQPQQFLTMNAKLYSLE-------RFQEDFADVSVKEVDLLKELEVSKVYHCDGLV 239
+AA +Q F M++++ S++ + DF D +K++ L ++EVSKV CDGL+
Sbjct: 45 KAARKQFMGFTMMDSRVCSMKFDLQGIRNNEHDFVDPCIKQIAKLDQIEVSKVLQCDGLL 104
Query: 240 LCVAKDKKEEPKLVLWNPYLCQTRWIEPRVEFNKNNRFAIGSDDERNHKIMRLVD 404
LCV KD +L++WNPYL QTR+I+PR FNK +A+G D+ N+KI+ D
Sbjct: 105 LCVGKDNS---RLLVWNPYLGQTRFIKPRKRFNKLEWYALGYDNNHNYKILMNYD 156
>TAIR9_protein||AT3G19890.1 | Symbols: | F-box family protein |
chr3:6914910-6916142 REVERSE
Length = 411
Score = 89 bits (218), Expect = 8e-018
Identities = 41/85 (48%), Positives = 61/85 (71%), Gaps = 4/85 (4%)
Frame = +3
Query: 153 EDFADVSVKEV-DLLKELEVSKVYHCDGLVLCVAKDKKEEPKLVLWNPYLCQTRWIEPRV 329
E F S++EV D++ ++++SKV+ CDGLVLCV D +V+WNPYL QT+WIE R
Sbjct: 78 EGFDRPSIREVGDIVNQIDISKVFQCDGLVLCVPSDNS---SVVVWNPYLGQTKWIEARE 134
Query: 330 EFNKNNRFAIGSDDERNHKIMRLVD 404
++++ FA+G D ++NHKI+RL D
Sbjct: 135 PHDESDMFALGYDKDKNHKILRLYD 159
Score = 71 bits (172), Expect = 2e-012
Identities = 44/152 (28%), Positives = 75/152 (49%), Gaps = 10/152 (6%)
Frame = +3
Query: 753 GDEQLAVLFGGYESGFFEIWVTLTVDPNGASCSKFLRMEPGPFCSYGFQLYPSSGGSFLV 932
G+E+LA L+ +++G IWVT ++ N S +++ P +GFQ GSF +
Sbjct: 248 GNEKLAALYQRWDTGEMAIWVTTKIESNEVLWSNLFKVDMKPLVRFGFQQCKDEAGSFFI 307
Query: 933 DEDNKLAVLFELDETQTTHKAFVFGQDGSFKSSVSLGQALLLENRSYNKLYKAA----RP 1100
DE+ KLAV+F LD+ + + + ++ +G+ L+ + + R
Sbjct: 308 DEEKKLAVVFNLDKKRGKRN----NKTRCYHTAYIIGEKGYLKKEVLGEAVEVRKDVYRS 363
Query: 1101 PLVCSSPYRPSSVQLNQPNV*DLRKRMCSEIK 1196
LVCSS Y PS ++NQ + + + C IK
Sbjct: 364 ALVCSSSYVPSLEKINQ--IEEEEEDKCKSIK 393
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,706,817,270
Number of Sequences: 33410
Number of Extensions: 20706817270
Number of Successful Extensions: 658841694
Number of sequences better than 0.0: 0
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