BLASTX 7.6.2
Query= UN41996 /QuerySize=646
(645 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G11510.1 | Symbols: | 40S ribosomal protein S... 284 4e-077
TAIR9_protein||AT3G52580.1 | Symbols: | 40S ribosomal protein S... 281 3e-076
TAIR9_protein||AT2G36160.1 | Symbols: | 40S ribosomal protein S... 281 4e-076
>TAIR9_protein||AT3G11510.1 | Symbols: | 40S ribosomal protein S14 (RPS14B) |
chr3:3623757-3624866 REVERSE
Length = 151
Score = 284 bits (725), Expect = 4e-077
Identities = 142/151 (94%), Positives = 146/151 (96%)
Frame = +2
Query: 104 MSRRKTREPKEETVTLGPAVRDGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMK 283
MS+RKT+EPK ETVTLGP+VR+GEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMK
Sbjct: 1 MSKRKTKEPKVETVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 284 VKADRDESPPYAAMLAAQDVVQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR 463
VKADRDES PYAAMLAAQDV QRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 464 SGMKIGRIEDVTPIPTDSTRRKGDRRGRRL* 556
SGMKIGRIEDVTPIPTDSTRRKG RRGRRL*
Sbjct: 121 SGMKIGRIEDVTPIPTDSTRRKGGRRGRRL* 151
>TAIR9_protein||AT3G52580.1 | Symbols: | 40S ribosomal protein S14 (RPS14C) |
chr3:19503324-19504701 FORWARD
Length = 151
Score = 281 bits (718), Expect = 3e-076
Identities = 140/151 (92%), Positives = 145/151 (96%)
Frame = +2
Query: 104 MSRRKTREPKEETVTLGPAVRDGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMK 283
MS+RKT+EPK E VTLGPAVR+GEQVFGVVH+FASFNDTFIHVTDLSGRETLVRITGGMK
Sbjct: 1 MSKRKTKEPKVENVTLGPAVREGEQVFGVVHVFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 284 VKADRDESPPYAAMLAAQDVVQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR 463
VKADRDES PYAAMLAAQDV QRCKELGITA+HVKLRATGGNKTKTPGPGAQSALRALAR
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITAIHVKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 464 SGMKIGRIEDVTPIPTDSTRRKGDRRGRRL* 556
SGMKIGRIEDVTPIPTDSTRRKG RRGRRL*
Sbjct: 121 SGMKIGRIEDVTPIPTDSTRRKGGRRGRRL* 151
>TAIR9_protein||AT2G36160.1 | Symbols: | 40S ribosomal protein S14 (RPS14A) |
chr2:15169925-15171159 FORWARD
Length = 151
Score = 281 bits (717), Expect = 4e-076
Identities = 140/151 (92%), Positives = 145/151 (96%)
Frame = +2
Query: 104 MSRRKTREPKEETVTLGPAVRDGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMK 283
MS+RKT+EPK + VTLGP+VR+GEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMK
Sbjct: 1 MSKRKTKEPKVDVVTLGPSVREGEQVFGVVHIFASFNDTFIHVTDLSGRETLVRITGGMK 60
Query: 284 VKADRDESPPYAAMLAAQDVVQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR 463
VKADRDES PYAAMLAAQDV QRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR
Sbjct: 61 VKADRDESSPYAAMLAAQDVAQRCKELGITAMHVKLRATGGNKTKTPGPGAQSALRALAR 120
Query: 464 SGMKIGRIEDVTPIPTDSTRRKGDRRGRRL* 556
SGMKIGRIEDVTPIPTDSTRRKG RRGRRL*
Sbjct: 121 SGMKIGRIEDVTPIPTDSTRRKGGRRGRRL* 151
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,706,817,270
Number of Sequences: 33410
Number of Extensions: 20706817270
Number of Successful Extensions: 658841694
Number of sequences better than 0.0: 0
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