BLASTX 7.6.2
Query= UN42054 /QuerySize=495
(494 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|99014566|emb|CAK22270.1| Photosystem II 10 kDa polypeptide, c... 166 1e-039
gi|28207611|gb|AAO32060.1| photosystem II 10kDa polypeptide [Bra... 146 1e-033
gi|119720780|gb|ABL97960.1| photosystem II 10kDa polytpeptide [B... 146 1e-033
gi|1346871|sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 1... 145 1e-033
gi|121483553|gb|ABM54168.1| PSII 10Kd peptide [Brassica juncea] 145 2e-033
gi|15219268|ref|NP_178025.1| photosystem II subunit R [Arabidops... 142 1e-032
gi|119720770|gb|ABL97955.1| chloroplast photosystem II 10 kDa po... 141 4e-032
gi|1418984|emb|CAA99757.1| photosystem II 10 kD polypeptide [Sol... 132 1e-029
gi|297839767|ref|XP_002887765.1| hypothetical protein ARALYDRAFT... 131 2e-029
gi|131399|sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10... 130 5e-029
gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName: Full=Photosystem II 1... 130 6e-029
gi|21491|emb|CAA27989.1| unnamed protein product [Solanum tubero... 130 6e-029
gi|193872616|gb|ACF23036.1| ST244 [Eutrema halophilum] 129 1e-028
gi|3914472|sp|Q40519.1|PSBR_TOBAC RecName: Full=Photosystem II 1... 128 2e-028
gi|158343304|gb|ABW35320.1| chloroplast photosystem II PsbR [Pro... 127 3e-028
gi|131400|sp|P10690.1|PSBR_SPIOL RecName: Full=Photosystem II 10... 127 5e-028
gi|104763664|gb|ABF74605.1| chloroplast photosystem II 10 kDa pr... 127 5e-028
gi|118488826|gb|ABK96223.1| unknown [Populus trichocarpa x Popul... 126 9e-028
gi|255578166|ref|XP_002529952.1| Photosystem II 10 kDa polypepti... 126 1e-027
gi|224115282|ref|XP_002332206.1| hypothetical protein POPTRDRAFT... 125 2e-027
>gi|99014566|emb|CAK22270.1| Photosystem II 10 kDa polypeptide, chloroplast
precursor [Chenopodium rubrum]
Length = 121
Score = 166 bits (418), Expect = 1e-039
Identities = 89/122 (72%), Positives = 101/122 (82%), Gaps = 7/122 (5%)
Frame = +3
Query: 33 MAASVMLSSVTLKPVGFTVE-KMSARGLPSLARASPYSFKIVASGVKKIK-----GYGVY 194
MAASV++SS++LKP F V+ K + +GLPSL+R+S SF + ASG KKIK G GVY
Sbjct: 1 MAASVVMSSLSLKPSSFNVDTKAAVKGLPSLSRSST-SFTVRASGGKKIKTDKPSGKGVY 59
Query: 195 KFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSAL 374
+FVDKYGANVDGYSPIYNEEEWS SGDVY GG TGL IWAVTLAG+LAGGALLVYNTSAL
Sbjct: 60 QFVDKYGANVDGYSPIYNEEEWSPSGDVYTGGTTGLLIWAVTLAGLLAGGALLVYNTSAL 119
Query: 375 AQ 380
AQ
Sbjct: 120 AQ 121
>gi|28207611|gb|AAO32060.1| photosystem II 10kDa polypeptide [Brassica rapa
subsp. pekinensis]
Length = 137
Score = 146 bits (366), Expect = 1e-033
Identities = 80/118 (67%), Positives = 88/118 (74%), Gaps = 12/118 (10%)
Frame = +3
Query: 51 LSSVTLKPVGFTVEKMSARGLPSLARASPYSFK--------IVASGVKKIKGYGVYKFVD 206
L S+T P F K+ A G+ + P+ + ASG +K KGYGVYKFVD
Sbjct: 24 LPSLTRAPSSF---KIVASGVKKIKTDKPFGVNGSMDLRDGLDASG-RKGKGYGVYKFVD 79
Query: 207 KYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 380
KYGANVDGYSPIYNE+EWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ
Sbjct: 80 KYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 137
>gi|119720780|gb|ABL97960.1| photosystem II 10kDa polytpeptide [Brassica rapa]
Length = 140
Score = 146 bits (366), Expect = 1e-033
Identities = 80/118 (67%), Positives = 88/118 (74%), Gaps = 12/118 (10%)
Frame = +3
Query: 51 LSSVTLKPVGFTVEKMSARGLPSLARASPYSFK--------IVASGVKKIKGYGVYKFVD 206
L S+T P F K+ A G+ + P+ + ASG +K KGYGVYKFVD
Sbjct: 27 LPSLTRAPSSF---KIVASGVKKIKTDKPFGVNGSMDLRDGLDASG-RKGKGYGVYKFVD 82
Query: 207 KYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 380
KYGANVDGYSPIYNE+EWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ
Sbjct: 83 KYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 140
>gi|1346871|sp|P49108.1|PSBR_BRACM RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Flags: Precursor
Length = 141
Score = 145 bits (365), Expect = 1e-033
Identities = 80/126 (63%), Positives = 91/126 (72%), Gaps = 12/126 (9%)
Frame = +3
Query: 27 EEMAASVMLSSVTLKPVGFTVEKMSARGLPSLARASPYSFK--------IVASGVKKIKG 182
E+M+A + S P F ++ A G+ + P+ + ASG +K KG
Sbjct: 20 EKMSARGLPSLTRASPSSF---RIVASGVKKIKTDKPFGVNGSMDLRDGVDASG-RKGKG 75
Query: 183 YGVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYN 362
YGVYKFVDKYGANVDGYSPIYNE+EWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYN
Sbjct: 76 YGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYN 135
Query: 363 TSALAQ 380
TSALAQ
Sbjct: 136 TSALAQ 141
>gi|121483553|gb|ABM54168.1| PSII 10Kd peptide [Brassica juncea]
Length = 141
Score = 145 bits (364), Expect = 2e-033
Identities = 80/126 (63%), Positives = 91/126 (72%), Gaps = 12/126 (9%)
Frame = +3
Query: 27 EEMAASVMLSSVTLKPVGFTVEKMSARGLPSLARASPYSFK--------IVASGVKKIKG 182
E+M+A + S P F ++ A G+ + P+ + ASG +K KG
Sbjct: 20 EKMSARGLPSLTRASPSSF---RIVASGVKKIKTDKPFGVNGSMDLRDGVDASG-RKGKG 75
Query: 183 YGVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYN 362
YGVYKFVD+YGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYN
Sbjct: 76 YGVYKFVDEYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYN 135
Query: 363 TSALAQ 380
TSALAQ
Sbjct: 136 TSALAQ 141
>gi|15219268|ref|NP_178025.1| photosystem II subunit R [Arabidopsis thaliana]
Length = 140
Score = 142 bits (357), Expect = 1e-032
Identities = 80/125 (64%), Positives = 89/125 (71%), Gaps = 12/125 (9%)
Frame = +3
Query: 30 EMAASVMLSSVTLKPVGFTVEKMSARGLPSLARASPYSFK--------IVASGVKKIKGY 185
E A+ L S+T F K+ A G+ + P+ + ASG +K KGY
Sbjct: 20 EKTAARGLPSLTRARPSF---KIVASGVKKIKTDKPFGINGSMDLRDGVDASG-RKGKGY 75
Query: 186 GVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNT 365
GVYK+VDKYGANVDGYSPIYNE EWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNT
Sbjct: 76 GVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNT 135
Query: 366 SALAQ 380
SALAQ
Sbjct: 136 SALAQ 140
>gi|119720770|gb|ABL97955.1| chloroplast photosystem II 10 kDa polypeptide
precursor [Brassica rapa]
Length = 82
Score = 141 bits (353), Expect = 4e-032
Identities = 70/75 (93%), Positives = 71/75 (94%), Gaps = 1/75 (1%)
Frame = +3
Query: 156 ASGVKKIKGYGVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGIL 335
ASG +K KGYGVYKFVDKYGANVDGYSPIYNEEEWS GDVYKGGVTGLAIWAVTLAGIL
Sbjct: 9 ASG-RKGKGYGVYKFVDKYGANVDGYSPIYNEEEWSPGGDVYKGGVTGLAIWAVTLAGIL 67
Query: 336 AGGALLVYNTSALAQ 380
AGGALLVYNTSALAQ
Sbjct: 68 AGGALLVYNTSALAQ 82
>gi|1418984|emb|CAA99757.1| photosystem II 10 kD polypeptide [Solanum
lycopersicum]
Length = 130
Score = 132 bits (331), Expect = 1e-029
Identities = 70/104 (67%), Positives = 77/104 (74%), Gaps = 9/104 (8%)
Frame = +3
Query: 93 KMSARGLPSLARASPYSFK--------IVASGVKKIKGYGVYKFVDKYGANVDGYSPIYN 248
K+ ARG+ L PY + ASG +K KG GVY++VDKYGANVDGYSPIYN
Sbjct: 28 KVVARGVKKLKTDKPYGINGSMALRDGVDASG-RKPKGKGVYQYVDKYGANVDGYSPIYN 86
Query: 249 EEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 380
+EWS SGDVY GG TGLAIWAVTL GILAGGALLVYNTSALAQ
Sbjct: 87 TDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGALLVYNTSALAQ 130
>gi|297839767|ref|XP_002887765.1| hypothetical protein ARALYDRAFT_477073
[Arabidopsis lyrata subsp. lyrata]
Length = 133
Score = 131 bits (329), Expect = 2e-029
Identities = 74/118 (62%), Positives = 83/118 (70%), Gaps = 12/118 (10%)
Frame = +3
Query: 30 EMAASVMLSSVTLKPVGFTVEKMSARGLPSLARASPYSFK--------IVASGVKKIKGY 185
E AA+ L S+T F K+ A G+ + P+ + ASG +K KGY
Sbjct: 20 EKAAARGLPSLTRARPSF---KIVASGVKKIKTDKPFGINGSMDLRDGVDASG-RKGKGY 75
Query: 186 GVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVY 359
GVYK+VDKYGANVDGYSPIYNE EWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVY
Sbjct: 76 GVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVY 133
>gi|131399|sp|P06183.1|PSBR_SOLTU RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; AltName: Full=Light-inducible
tissue-specific ST-LS1 protein; Flags: Precursor
Length = 138
Score = 130 bits (326), Expect = 5e-029
Identities = 69/104 (66%), Positives = 76/104 (73%), Gaps = 9/104 (8%)
Frame = +3
Query: 93 KMSARGLPSLARASPYSFK--------IVASGVKKIKGYGVYKFVDKYGANVDGYSPIYN 248
K+ A G+ L PY + ASG +K KG GVY++VDKYGANVDGYSPIYN
Sbjct: 36 KVVASGVKKLKTDKPYGINGSMALRDGVDASG-RKPKGKGVYQYVDKYGANVDGYSPIYN 94
Query: 249 EEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 380
+EWS SGDVY GG TGLAIWAVTL GILAGGALLVYNTSALAQ
Sbjct: 95 TDEWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVYNTSALAQ 138
>gi|3914471|sp|Q40163.1|PSBR_SOLLC RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Flags: Precursor
Length = 138
Score = 130 bits (325), Expect = 6e-029
Identities = 69/104 (66%), Positives = 76/104 (73%), Gaps = 9/104 (8%)
Frame = +3
Query: 93 KMSARGLPSLARASPYSFK--------IVASGVKKIKGYGVYKFVDKYGANVDGYSPIYN 248
K+ A G+ L PY + ASG +K KG GVY++VDKYGANVDGYSPIYN
Sbjct: 36 KVVASGVKKLKTDKPYGINGSMALRDGVDASG-RKPKGKGVYQYVDKYGANVDGYSPIYN 94
Query: 249 EEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 380
+EWS SGDVY GG TGLAIWAVTL GILAGGALLVYNTSALAQ
Sbjct: 95 TDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGALLVYNTSALAQ 138
>gi|21491|emb|CAA27989.1| unnamed protein product [Solanum tuberosum]
Length = 138
Score = 130 bits (325), Expect = 6e-029
Identities = 69/104 (66%), Positives = 76/104 (73%), Gaps = 9/104 (8%)
Frame = +3
Query: 93 KMSARGLPSLARASPYSFK--------IVASGVKKIKGYGVYKFVDKYGANVDGYSPIYN 248
K+ A G+ L PY + ASG +K KG GVY++VDKYGANVDGYSPIYN
Sbjct: 36 KVVASGVKKLKTDKPYGINGSMALRDGLDASG-RKPKGKGVYQYVDKYGANVDGYSPIYN 94
Query: 249 EEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 380
+EWS SGDVY GG TGLAIWAVTL GILAGGALLVYNTSALAQ
Sbjct: 95 TDEWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVYNTSALAQ 138
>gi|193872616|gb|ACF23036.1| ST244 [Eutrema halophilum]
Length = 146
Score = 129 bits (322), Expect = 1e-028
Identities = 69/126 (54%), Positives = 82/126 (65%), Gaps = 12/126 (9%)
Frame = +3
Query: 27 EEMAASVMLSSVTLKPVGFTVEKMSARGLPSLARASPYSFK--------IVASGVKKIKG 182
E+M+A + S P F ++ A G+ + P+ + ASG +K KG
Sbjct: 20 EKMSARGLPSLTRASPSSF---RIVASGVKKIKTDKPFGVNGSMDLRDGVDASG-RKGKG 75
Query: 183 YGVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYN 362
YGVYKFVDKYGANVDGYSPIYNEEEW+ GD YKGGVTGL WA TLAG+L GG L+VYN
Sbjct: 76 YGVYKFVDKYGANVDGYSPIYNEEEWAPGGDTYKGGVTGLVFWAATLAGLLGGGPLVVYN 135
Query: 363 TSALAQ 380
T ALAQ
Sbjct: 136 TGALAQ 141
>gi|3914472|sp|Q40519.1|PSBR_TOBAC RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Short=PII10; Flags: Precursor
Length = 136
Score = 128 bits (321), Expect = 2e-028
Identities = 67/104 (64%), Positives = 76/104 (73%), Gaps = 9/104 (8%)
Frame = +3
Query: 93 KMSARGLPSLARASPYSFK--------IVASGVKKIKGYGVYKFVDKYGANVDGYSPIYN 248
++ A G+ L PY + ASG +K KG GVY+FVDKYGANVDGYSPIYN
Sbjct: 34 RVQASGVKKLKTDKPYGINGSMSLRDGVDASG-RKQKGKGVYQFVDKYGANVDGYSPIYN 92
Query: 249 EEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 380
++WS SGDVY GG TGLAIWAVTL GILAGGALLV+NTSALAQ
Sbjct: 93 TDDWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVFNTSALAQ 136
>gi|158343304|gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis
juliflora]
Length = 139
Score = 127 bits (319), Expect = 3e-028
Identities = 62/76 (81%), Positives = 66/76 (86%)
Frame = +3
Query: 153 VASGVKKIKGYGVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGI 332
V S +K KG GVY+FVDKYG NVDGYSPIYN E+WS SGDVY GG TGLAIWAVTLAG+
Sbjct: 64 VDSSGRKGKGKGVYQFVDKYGTNVDGYSPIYNTEDWSPSGDVYVGGTTGLAIWAVTLAGL 123
Query: 333 LAGGALLVYNTSALAQ 380
LAGGALLVYNTSALAQ
Sbjct: 124 LAGGALLVYNTSALAQ 139
>gi|131400|sp|P10690.1|PSBR_SPIOL RecName: Full=Photosystem II 10 kDa
polypeptide, chloroplastic; Flags: Precursor
Length = 140
Score = 127 bits (317), Expect = 5e-028
Identities = 61/76 (80%), Positives = 66/76 (86%)
Frame = +3
Query: 153 VASGVKKIKGYGVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGI 332
V S +K G GVY+FVDKYGANVDGYSPIYNEEEW+ +GDVY GG TGL IWAVTLAG+
Sbjct: 65 VDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAGGTTGLLIWAVTLAGL 124
Query: 333 LAGGALLVYNTSALAQ 380
LAGGALLVYNTSALAQ
Sbjct: 125 LAGGALLVYNTSALAQ 140
>gi|104763664|gb|ABF74605.1| chloroplast photosystem II 10 kDa protein [Agave
tequilana]
Length = 144
Score = 127 bits (317), Expect = 5e-028
Identities = 62/75 (82%), Positives = 67/75 (89%), Gaps = 1/75 (1%)
Frame = +3
Query: 156 ASGVKKIKGYGVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGIL 335
ASG +K KG GVY+FVDKYGANVDGYSPIY+ EEWS SGDVY GG TGL IWA+TLAG+L
Sbjct: 71 ASG-RKAKGKGVYQFVDKYGANVDGYSPIYSPEEWSPSGDVYVGGTTGLLIWAITLAGLL 129
Query: 336 AGGALLVYNTSALAQ 380
AGGALLVYNTSALAQ
Sbjct: 130 AGGALLVYNTSALAQ 144
>gi|118488826|gb|ABK96223.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 137
Score = 126 bits (315), Expect = 9e-028
Identities = 67/104 (64%), Positives = 77/104 (74%), Gaps = 9/104 (8%)
Frame = +3
Query: 93 KMSARGLPSLARASPYSF--------KIVASGVKKIKGYGVYKFVDKYGANVDGYSPIYN 248
K+ A G+ + +PY + ASG +K KG GVY++VDKYGANVDGYSPIYN
Sbjct: 35 KIEASGVKKIKTDTPYGTGGGMNLRDGLDASG-RKPKGKGVYQYVDKYGANVDGYSPIYN 93
Query: 249 EEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 380
+EWS SGDVY GG TGL IWAVTLAGILAGGALLVY+TSALAQ
Sbjct: 94 TDEWSPSGDVYAGGKTGLLIWAVTLAGILAGGALLVYSTSALAQ 137
>gi|255578166|ref|XP_002529952.1| Photosystem II 10 kDa polypeptide, chloroplast
precursor, putative [Ricinus communis]
Length = 138
Score = 126 bits (314), Expect = 1e-027
Identities = 61/75 (81%), Positives = 67/75 (89%), Gaps = 1/75 (1%)
Frame = +3
Query: 156 ASGVKKIKGYGVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGIL 335
ASG +K G GVY+FVDKYGANVDGYSPIYN +EWS +GDVY GG TGLAIWA+TLAG+L
Sbjct: 65 ASG-RKPTGKGVYQFVDKYGANVDGYSPIYNTDEWSPTGDVYAGGATGLAIWAITLAGLL 123
Query: 336 AGGALLVYNTSALAQ 380
AGGALLVYNTSALAQ
Sbjct: 124 AGGALLVYNTSALAQ 138
>gi|224115282|ref|XP_002332206.1| hypothetical protein POPTRDRAFT_674736
[Populus trichocarpa]
Length = 137
Score = 125 bits (312), Expect = 2e-027
Identities = 66/104 (63%), Positives = 77/104 (74%), Gaps = 9/104 (8%)
Frame = +3
Query: 93 KMSARGLPSLARASPYSF--------KIVASGVKKIKGYGVYKFVDKYGANVDGYSPIYN 248
K+ A G+ + +PY + ASG +K KG GVY++VDKYGANVDGYSPIYN
Sbjct: 35 KIEASGVKKIKTDTPYGTGGGMNLRDGLDASG-RKPKGKGVYQYVDKYGANVDGYSPIYN 93
Query: 249 EEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 380
+EWS +GDVY GG TGL IWAVTLAGILAGGALLVY+TSALAQ
Sbjct: 94 TDEWSPTGDVYAGGKTGLLIWAVTLAGILAGGALLVYSTSALAQ 137
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,631,408,714,302
Number of Sequences: 15229318
Number of Extensions: 4631408714302
Number of Successful Extensions: 1098110979
Number of sequences better than 0.0: 0
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