BLASTX 7.6.2
Query= UN42054 /QuerySize=495
(494 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P49108|PSBR_BRACM Photosystem II 10 kDa polypeptide, chloropl... 145 1e-034
sp|P27202|PSBR_ARATH Photosystem II 10 kDa polypeptide, chloropl... 142 1e-033
sp|P06183|PSBR_SOLTU Photosystem II 10 kDa polypeptide, chloropl... 130 5e-030
sp|Q40163|PSBR_SOLLC Photosystem II 10 kDa polypeptide, chloropl... 130 6e-030
sp|Q40519|PSBR_TOBAC Photosystem II 10 kDa polypeptide, chloropl... 128 2e-029
sp|P10690|PSBR_SPIOL Photosystem II 10 kDa polypeptide, chloropl... 127 5e-029
sp|Q40070|PSBR_HORVU Photosystem II 10 kDa polypeptide, chloropl... 116 9e-026
>sp|P49108|PSBR_BRACM Photosystem II 10 kDa polypeptide, chloroplastic
OS=Brassica campestris GN=PSBR PE=2 SV=1
Length = 141
Score = 145 bits (365), Expect = 1e-034
Identities = 80/126 (63%), Positives = 91/126 (72%), Gaps = 12/126 (9%)
Frame = +3
Query: 27 EEMAASVMLSSVTLKPVGFTVEKMSARGLPSLARASPYSFK--------IVASGVKKIKG 182
E+M+A + S P F ++ A G+ + P+ + ASG +K KG
Sbjct: 20 EKMSARGLPSLTRASPSSF---RIVASGVKKIKTDKPFGVNGSMDLRDGVDASG-RKGKG 75
Query: 183 YGVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYN 362
YGVYKFVDKYGANVDGYSPIYNE+EWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYN
Sbjct: 76 YGVYKFVDKYGANVDGYSPIYNEDEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYN 135
Query: 363 TSALAQ 380
TSALAQ
Sbjct: 136 TSALAQ 141
Score = 86 bits (212), Expect = 8e-017
Identities = 45/49 (91%), Positives = 46/49 (93%)
Frame = +3
Query: 33 MAASVMLSSVTLKPVGFTVEKMSARGLPSLARASPYSFKIVASGVKKIK 179
MAASVMLSSVTLKP GFTVEKMSARGLPSL RASP SF+IVASGVKKIK
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKMSARGLPSLTRASPSSFRIVASGVKKIK 49
>sp|P27202|PSBR_ARATH Photosystem II 10 kDa polypeptide, chloroplastic
OS=Arabidopsis thaliana GN=PSBR PE=1 SV=1
Length = 140
Score = 142 bits (357), Expect = 1e-033
Identities = 80/125 (64%), Positives = 89/125 (71%), Gaps = 12/125 (9%)
Frame = +3
Query: 30 EMAASVMLSSVTLKPVGFTVEKMSARGLPSLARASPYSFK--------IVASGVKKIKGY 185
E A+ L S+T F K+ A G+ + P+ + ASG +K KGY
Sbjct: 20 EKTAARGLPSLTRARPSF---KIVASGVKKIKTDKPFGINGSMDLRDGVDASG-RKGKGY 75
Query: 186 GVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNT 365
GVYK+VDKYGANVDGYSPIYNE EWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNT
Sbjct: 76 GVYKYVDKYGANVDGYSPIYNENEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNT 135
Query: 366 SALAQ 380
SALAQ
Sbjct: 136 SALAQ 140
Score = 78 bits (191), Expect = 2e-014
Identities = 43/49 (87%), Positives = 44/49 (89%), Gaps = 1/49 (2%)
Frame = +3
Query: 33 MAASVMLSSVTLKPVGFTVEKMSARGLPSLARASPYSFKIVASGVKKIK 179
MAASVMLSSVTLKP GFTVEK +ARGLPSL RA P SFKIVASGVKKIK
Sbjct: 1 MAASVMLSSVTLKPAGFTVEKTAARGLPSLTRARP-SFKIVASGVKKIK 48
>sp|P06183|PSBR_SOLTU Photosystem II 10 kDa polypeptide, chloroplastic
OS=Solanum tuberosum GN=PSBR PE=2 SV=1
Length = 138
Score = 130 bits (326), Expect = 5e-030
Identities = 69/104 (66%), Positives = 76/104 (73%), Gaps = 9/104 (8%)
Frame = +3
Query: 93 KMSARGLPSLARASPYSFK--------IVASGVKKIKGYGVYKFVDKYGANVDGYSPIYN 248
K+ A G+ L PY + ASG +K KG GVY++VDKYGANVDGYSPIYN
Sbjct: 36 KVVASGVKKLKTDKPYGINGSMALRDGVDASG-RKPKGKGVYQYVDKYGANVDGYSPIYN 94
Query: 249 EEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 380
+EWS SGDVY GG TGLAIWAVTL GILAGGALLVYNTSALAQ
Sbjct: 95 TDEWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVYNTSALAQ 138
Score = 57 bits (135), Expect = 6e-008
Identities = 31/47 (65%), Positives = 40/47 (85%), Gaps = 2/47 (4%)
Frame = +3
Query: 39 ASVMLSSVTLKPVGFTVEKMSARGLPSLARASPYSFKIVASGVKKIK 179
AS ++SS++LKP FT+EK S +GLPSLAR+S SFK+VASGVKK+K
Sbjct: 2 ASTVMSSLSLKPT-FTLEKTSVKGLPSLARSSS-SFKVVASGVKKLK 46
>sp|Q40163|PSBR_SOLLC Photosystem II 10 kDa polypeptide, chloroplastic
OS=Solanum lycopersicum GN=PSBR PE=2 SV=1
Length = 138
Score = 130 bits (325), Expect = 6e-030
Identities = 69/104 (66%), Positives = 76/104 (73%), Gaps = 9/104 (8%)
Frame = +3
Query: 93 KMSARGLPSLARASPYSFK--------IVASGVKKIKGYGVYKFVDKYGANVDGYSPIYN 248
K+ A G+ L PY + ASG +K KG GVY++VDKYGANVDGYSPIYN
Sbjct: 36 KVVASGVKKLKTDKPYGINGSMALRDGVDASG-RKPKGKGVYQYVDKYGANVDGYSPIYN 94
Query: 249 EEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 380
+EWS SGDVY GG TGLAIWAVTL GILAGGALLVYNTSALAQ
Sbjct: 95 TDEWSPSGDVYVGGTTGLAIWAVTLLGILAGGALLVYNTSALAQ 138
Score = 56 bits (133), Expect = 1e-007
Identities = 30/47 (63%), Positives = 40/47 (85%), Gaps = 2/47 (4%)
Frame = +3
Query: 39 ASVMLSSVTLKPVGFTVEKMSARGLPSLARASPYSFKIVASGVKKIK 179
AS ++SS++LKP FT+EK+S +GLPSL R+S SFK+VASGVKK+K
Sbjct: 2 ASTVMSSLSLKPT-FTLEKISVKGLPSLTRSSS-SFKVVASGVKKLK 46
>sp|Q40519|PSBR_TOBAC Photosystem II 10 kDa polypeptide, chloroplastic
OS=Nicotiana tabacum GN=PSBR PE=2 SV=1
Length = 136
Score = 128 bits (321), Expect = 2e-029
Identities = 67/104 (64%), Positives = 76/104 (73%), Gaps = 9/104 (8%)
Frame = +3
Query: 93 KMSARGLPSLARASPYSFK--------IVASGVKKIKGYGVYKFVDKYGANVDGYSPIYN 248
++ A G+ L PY + ASG +K KG GVY+FVDKYGANVDGYSPIYN
Sbjct: 34 RVQASGVKKLKTDKPYGINGSMSLRDGVDASG-RKQKGKGVYQFVDKYGANVDGYSPIYN 92
Query: 249 EEEWSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALAQ 380
++WS SGDVY GG TGLAIWAVTL GILAGGALLV+NTSALAQ
Sbjct: 93 TDDWSPSGDVYVGGTTGLAIWAVTLVGILAGGALLVFNTSALAQ 136
>sp|P10690|PSBR_SPIOL Photosystem II 10 kDa polypeptide, chloroplastic
OS=Spinacia oleracea GN=PSBR PE=2 SV=1
Length = 140
Score = 127 bits (317), Expect = 5e-029
Identities = 61/76 (80%), Positives = 66/76 (86%)
Frame = +3
Query: 153 VASGVKKIKGYGVYKFVDKYGANVDGYSPIYNEEEWSASGDVYKGGVTGLAIWAVTLAGI 332
V S +K G GVY+FVDKYGANVDGYSPIYNEEEW+ +GDVY GG TGL IWAVTLAG+
Sbjct: 65 VDSSGRKPTGKGVYQFVDKYGANVDGYSPIYNEEEWAPTGDVYAGGTTGLLIWAVTLAGL 124
Query: 333 LAGGALLVYNTSALAQ 380
LAGGALLVYNTSALAQ
Sbjct: 125 LAGGALLVYNTSALAQ 140
>sp|Q40070|PSBR_HORVU Photosystem II 10 kDa polypeptide, chloroplastic
OS=Hordeum vulgare GN=PSBR PE=3 SV=1
Length = 138
Score = 116 bits (289), Expect = 9e-026
Identities = 64/100 (64%), Positives = 72/100 (72%), Gaps = 9/100 (9%)
Frame = +3
Query: 102 ARGLPSLARASPY------SFK--IVASGVKKIKGYGVYKFVDKYGANVDGYSPIYNEEE 257
A+ + A PY +FK + ASG + KG GVY+F DKYGANVDGYSPIY EE
Sbjct: 39 AKKAKKVQTAQPYGPGGGVAFKEGVDASG-RVAKGKGVYQFADKYGANVDGYSPIYTPEE 97
Query: 258 WSASGDVYKGGVTGLAIWAVTLAGILAGGALLVYNTSALA 377
WS SGDVY GG TGL +WAVTLAGIL GGALLVY+TSALA
Sbjct: 98 WSPSGDVYVGGKTGLFLWAVTLAGILLGGALLVYSTSALA 137
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160,830,358,129
Number of Sequences: 518415
Number of Extensions: 160830358129
Number of Successful Extensions: 990542261
Number of sequences better than 0.0: 0
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