BLASTX 7.6.2
Query= UN42121 /QuerySize=765
(764 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G27720.1 | Symbols: emb1644 | emb1644 (embryo ... 262 2e-070
TAIR9_protein||AT1G20580.1 | Symbols: | small nuclear ribonucle... 69 2e-012
TAIR9_protein||AT3G07590.1 | Symbols: | small nuclear ribonucle... 60 1e-009
TAIR9_protein||AT4G25630.1 | Symbols: FIB2, ATFIB2 | FIB2 (FIBRI... 47 9e-006
>TAIR9_protein||AT5G27720.1 | Symbols: emb1644 | emb1644 (embryo defective 1644)
| chr5:9815904-9817304 FORWARD
Length = 130
Score = 262 bits (669), Expect = 2e-070
Identities = 122/130 (93%), Positives = 124/130 (95%)
Frame = +1
Query: 214 MLPLSLLKTAQGYPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 393
MLPLSLLKTAQG+PMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
Sbjct: 1 MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY 60
Query: 394 IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPPGVGRGRGRGMDDGGGRGRGRGAPMAKMTG 573
IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPPGVGRGRGRG+DDGG RGRGRG M KM G
Sbjct: 61 IRGNTIKYLRVPDEVIDKVQEEKTRTDRKPPGVGRGRGRGVDDGGARGRGRGTSMGKMGG 120
Query: 574 NRGAGRGRG* 603
NRGAGRGRG*
Sbjct: 121 NRGAGRGRG* 130
>TAIR9_protein||AT1G20580.1 | Symbols: | small nuclear ribonucleoprotein,
putative / snRNP, putative / Sm protein, putative |
chr1:7128979-7130371 FORWARD
Length = 132
Score = 69 bits (168), Expect = 2e-012
Identities = 43/127 (33%), Positives = 69/127 (54%), Gaps = 12/127 (9%)
Frame = +1
Query: 217 LPLSLLKTAQGYPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 396
+P+ LL A G+ + VELK+GE Y G ++ C+ N L ++ T+KDG + ++ +I
Sbjct: 7 IPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDG-KVSQLEHVFI 65
Query: 397 RGNTIKYLRVPDEV----IDKVQEEKTRTDRKPPGVGRGRGRGMDDGGGRGRGRGAPMAK 564
RG+ ++++ +PD + + K + + + GVGRGRG M G GRG
Sbjct: 66 RGSKVRFMVIPDILKHAPMFKRLDARIKGKSSSLGVGRGRG-AMRGKPAAGPGRG----- 119
Query: 565 MTGNRGA 585
TG RGA
Sbjct: 120 -TGGRGA 125
>TAIR9_protein||AT3G07590.1 | Symbols: | small nuclear ribonucleoprotein D1,
putative / snRNP core protein D1, putative / Sm protein D1, putative |
chr3:2423146-2423958 FORWARD
Length = 115
Score = 60 bits (145), Expect = 1e-009
Identities = 37/98 (37%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Frame = +1
Query: 262 VELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPD--E 435
+ELKNG +G + D MN HL+ V + K G + +RGN I+Y +PD
Sbjct: 17 IELKNGTVVHGTITGVDVSMNTHLKTVKMSLK-GKNPVTLDHLSLRGNNIRYYILPDSLN 75
Query: 436 VIDKVQEEKTRTDRKPPGVGRGRGRGMDDGGGRGRGRG 549
+ + E+ R K P G+ GRG G GRGRGRG
Sbjct: 76 LETLLVEDTPRVKPKKPVAGKAVGRGRGRGRGRGRGRG 113
>TAIR9_protein||AT4G25630.1 | Symbols: FIB2, ATFIB2 | FIB2 (FIBRILLARIN 2);
snoRNA binding | chr4:13074239-13076205 FORWARD
Length = 321
Score = 47 bits (111), Expect = 9e-006
Identities = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 487 GVGRGRGRGMDDGGGRGRGRGAPMAKMTGNRG-AGRG 594
G GRG GRG D GGRGRGRG P G RG AGRG
Sbjct: 36 GGGRGGGRGFSDRGGRGRGRGPPRGGARGGRGPAGRG 72
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,751,266,885
Number of Sequences: 33410
Number of Extensions: 20751266885
Number of Successful Extensions: 658862073
Number of sequences better than 0.0: 0
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