BLASTX 7.6.2
Query= UN42153 /QuerySize=1087
(1086 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G29270.1 | Symbols: | ubiquitin-protein ligas... 242 5e-064
TAIR9_protein||AT3G29270.2 | Symbols: | ubiquitin-protein ligas... 242 5e-064
TAIR9_protein||AT1G69330.1 | Symbols: | zinc finger (C3HC4-type... 163 2e-040
TAIR9_protein||AT1G74370.1 | Symbols: | zinc finger (C3HC4-type... 138 6e-033
>TAIR9_protein||AT3G29270.1 | Symbols: | ubiquitin-protein ligase |
chr3:11235326-11236117 FORWARD
Length = 264
Score = 242 bits (615), Expect = 5e-064
Identities = 116/138 (84%), Positives = 123/138 (89%), Gaps = 9/138 (6%)
Frame = -1
Query: 948 MLSIPDTRMWNLASSYLT---GPKHHETRRPVHDVHAHDECSDDESSSVGSSKEEEGLEC 778
MLSIPDTRMWNLASSYLT GPK ++ RRP VHAH ECSDD+ SSVGS ++EGLEC
Sbjct: 1 MLSIPDTRMWNLASSYLTGNIGPK-NDIRRP---VHAHAECSDDDVSSVGS--KDEGLEC 54
Query: 777 PICWESFNIVENVPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISSPWCNKLSFR 598
PICWESFNIVENVPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFIS PWCN LSFR
Sbjct: 55 PICWESFNIVENVPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFR 114
Query: 597 LVFKGALRFPHKNYFLLW 544
LVF+G LRFPHKNYF+LW
Sbjct: 115 LVFRGTLRFPHKNYFVLW 132
Score = 146 bits (368), Expect = 2e-035
Identities = 74/95 (77%), Positives = 80/95 (84%)
Frame = -3
Query: 496 HQREPPPPPTCLHHRHHRDNVQTSLRKSLVFFVQLAAKFPLVVMCLLIILYAVPICAAIL 317
H+ +P P + HR RDN+QTSLRKSLVFFVQL AKFPLVV+ LLIILYA+P AAIL
Sbjct: 170 HRSQPEPSRSVNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAIL 229
Query: 316 VMYILVTLLLALPSFLILYFAYPCLDWLVREIVT* 212
MYILVTLLLALPSFLILYFAYPCLDWLVREIVT*
Sbjct: 230 AMYILVTLLLALPSFLILYFAYPCLDWLVREIVT* 264
>TAIR9_protein||AT3G29270.2 | Symbols: | ubiquitin-protein ligase |
chr3:11235326-11236117 FORWARD
Length = 264
Score = 242 bits (615), Expect = 5e-064
Identities = 116/138 (84%), Positives = 123/138 (89%), Gaps = 9/138 (6%)
Frame = -1
Query: 948 MLSIPDTRMWNLASSYLT---GPKHHETRRPVHDVHAHDECSDDESSSVGSSKEEEGLEC 778
MLSIPDTRMWNLASSYLT GPK ++ RRP VHAH ECSDD+ SSVGS ++EGLEC
Sbjct: 1 MLSIPDTRMWNLASSYLTGNIGPK-NDIRRP---VHAHAECSDDDVSSVGS--KDEGLEC 54
Query: 777 PICWESFNIVENVPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISSPWCNKLSFR 598
PICWESFNIVENVPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFIS PWCN LSFR
Sbjct: 55 PICWESFNIVENVPYVLWCGHTMCKNCILGLQWAIVKLPTHPVQLPLFISCPWCNLLSFR 114
Query: 597 LVFKGALRFPHKNYFLLW 544
LVF+G LRFPHKNYF+LW
Sbjct: 115 LVFRGTLRFPHKNYFVLW 132
Score = 146 bits (368), Expect = 2e-035
Identities = 74/95 (77%), Positives = 80/95 (84%)
Frame = -3
Query: 496 HQREPPPPPTCLHHRHHRDNVQTSLRKSLVFFVQLAAKFPLVVMCLLIILYAVPICAAIL 317
H+ +P P + HR RDN+QTSLRKSLVFFVQL AKFPLVV+ LLIILYA+P AAIL
Sbjct: 170 HRSQPEPSRSVNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAIL 229
Query: 316 VMYILVTLLLALPSFLILYFAYPCLDWLVREIVT* 212
MYILVTLLLALPSFLILYFAYPCLDWLVREIVT*
Sbjct: 230 AMYILVTLLLALPSFLILYFAYPCLDWLVREIVT* 264
>TAIR9_protein||AT1G69330.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:26064138-26064950 REVERSE
Length = 271
Score = 163 bits (411), Expect = 2e-040
Identities = 67/110 (60%), Positives = 88/110 (80%), Gaps = 2/110 (1%)
Frame = -1
Query: 873 RRPVHDVHAHDECSDDESSSVGSSKEEEGLECPICWESFNIVENVPYVLWCGHTMCKNCI 694
+ P A +CSDDE S++ S++EEGLECPICWESFNIVENVPYVLWCGHT+C+NC+
Sbjct: 16 KSPKDSAQASSQCSDDEVSNI--SRDEEGLECPICWESFNIVENVPYVLWCGHTLCQNCV 73
Query: 693 LGLQWAIVKLPTHPVQLPLFISSPWCNKLSFRLVFKGALRFPHKNYFLLW 544
GLQ A+++L + +++P F+S PWC LSFR+V+KG L+FP KN+FLLW
Sbjct: 74 FGLQSAVLRLSSQDIRIPFFVSCPWCQLLSFRIVYKGNLKFPRKNFFLLW 123
Score = 77 bits (188), Expect = 2e-014
Identities = 38/84 (45%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Frame = -3
Query: 460 HHRHHRDNVQT--SLRKSLVFFVQLAAKFPLVVMCLLIILYAVPICAAILVMYILVTLLL 287
HH H + S KSL FF+ +KFP V++ LLI+ +A+P IL +Y L+T+L
Sbjct: 186 HHDHSNQPSRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILALYFLLTILF 245
Query: 286 ALPSFLILYFAYPCLDWLVREIVT 215
A+P+ L+LYFAYP L+ LV EI +
Sbjct: 246 AVPAGLVLYFAYPILERLVNEITS 269
>TAIR9_protein||AT1G74370.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:27958200-27958985 REVERSE
Length = 262
Score = 138 bits (347), Expect = 6e-033
Identities = 62/96 (64%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = -1
Query: 828 DESSSVGSSKEEEGLECPICWESFNIVENVPYVLWCGHTMCKNCILGLQWAIV-KLPTHP 652
D S + +EE LECPICWESFN+VENVPYVLWCGHT+CK C+LGLQ AIV K P
Sbjct: 30 DRSGDGRKTTKEEKLECPICWESFNVVENVPYVLWCGHTICKYCLLGLQRAIVIKSSALP 89
Query: 651 VQLPLFISSPWCNKLSFRLVFKGALRFPHKNYFLLW 544
QLP F++ PWCN LS RLV G +RFP KN++LLW
Sbjct: 90 FQLPFFVACPWCNILSLRLVCNGTIRFPSKNFYLLW 125
Score = 91 bits (225), Expect = 9e-019
Identities = 42/72 (58%), Positives = 55/72 (76%)
Frame = -3
Query: 427 SLRKSLVFFVQLAAKFPLVVMCLLIILYAVPICAAILVMYILVTLLLALPSFLILYFAYP 248
S+RKS+ L AKFPLVV+ LL+ LYA+P+ AA+L +Y VT LA+PSFL+LYFA+P
Sbjct: 191 SVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAVLGVYFFVTFALAVPSFLVLYFAFP 250
Query: 247 CLDWLVREIVT* 212
L+WL+REI T*
Sbjct: 251 SLNWLIREIAT* 262
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,751,266,885
Number of Sequences: 33410
Number of Extensions: 20751266885
Number of Successful Extensions: 658862073
Number of sequences better than 0.0: 0
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