BLASTX 7.6.2
Query= UN42188 /QuerySize=572
(571 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G19740.1 | Symbols: | 60S ribosomal protein L... 234 4e-062
TAIR9_protein||AT5G56710.1 | Symbols: | 60S ribosomal protein L... 219 1e-057
TAIR9_protein||AT4G26230.1 | Symbols: | 60S ribosomal protein L... 219 1e-057
TAIR9_protein||AT5G56710.2 | Symbols: | 60S ribosomal protein L... 102 2e-022
>TAIR9_protein||AT2G19740.1 | Symbols: | 60S ribosomal protein L31 (RPL31A) |
chr2:8513577-8514346 FORWARD
Length = 120
Score = 234 bits (595), Expect = 4e-062
Identities = 114/120 (95%), Positives = 119/120 (99%)
Frame = -2
Query: 516 MEKGKGRKEEIVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 337
MEKGKGRKEE+VTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN
Sbjct: 1 MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60
Query: 336 KQIWSKGIRGPPRRVRVRVARKRNDDEDAKEEFYSLVTVAEIPAEGLSGLGTKVIDEDE* 157
KQIWSKGIRGPPRR+RVRVARKRNDDEDAKEEF+SLVTVAEIPAEGLSGLGTKVI+E+E*
Sbjct: 61 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE* 120
>TAIR9_protein||AT5G56710.1 | Symbols: | 60S ribosomal protein L31 (RPL31C) |
chr5:22944003-22944767 REVERSE
Length = 120
Score = 219 bits (557), Expect = 1e-057
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = -2
Query: 516 MEKGKGRKEEIVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 337
M + KGRKEE++TREYTINLHRRLH CTFKKKAP AIKEIRKFA KAMGTKDVRVDVKLN
Sbjct: 1 MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60
Query: 336 KQIWSKGIRGPPRRVRVRVARKRNDDEDAKEEFYSLVTVAEIPAEGLSGLGTKVIDEDE* 157
KQIWSKGIRGPPRR+RVRVARKRNDDEDAKEEF+SLVTVAEIPAEGLSGLGTKVI+E++*
Sbjct: 61 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 120
>TAIR9_protein||AT4G26230.1 | Symbols: | 60S ribosomal protein L31 (RPL31B) |
chr4:13286026-13286553 FORWARD
Length = 120
Score = 219 bits (556), Expect = 1e-057
Identities = 106/120 (88%), Positives = 114/120 (95%)
Frame = -2
Query: 516 MEKGKGRKEEIVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 337
M + KGRKEE+VTREYTINLHRRLHSCTFKKKAP AIKEIRKFA K MGTKDVRVDVKLN
Sbjct: 1 MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60
Query: 336 KQIWSKGIRGPPRRVRVRVARKRNDDEDAKEEFYSLVTVAEIPAEGLSGLGTKVIDEDE* 157
KQIWSKGIRGPPRR+RVRVARKRNDDEDAKEEF+SLVTVAEIPAEGLSGLGTK+I+E++*
Sbjct: 61 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED* 120
>TAIR9_protein||AT5G56710.2 | Symbols: | 60S ribosomal protein L31 (RPL31C) |
chr5:22944003-22944767 REVERSE
Length = 86
Score = 102 bits (252), Expect = 2e-022
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = -2
Query: 516 MEKGKGRKEEIVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVD 349
M + KGRKEE++TREYTINLHRRLH CTFKKKAP AIKEIRKFA KAMGTKDVRVD
Sbjct: 1 MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56
Score = 55 bits (131), Expect = 3e-008
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Frame = -2
Query: 345 KLNKQIWSKGIRGPPRRVRVRVARKRNDDEDAK--EEFYSLVTVAEIPAEGLSGLGTKVI 172
+L+K + K + +R + A K +D + EEF+SLVTVAEIPAEGLSGLGTKVI
Sbjct: 23 RLHKCTFKKKAPKAIKEIR-KFAEKAMGTKDVRVDEEFFSLVTVAEIPAEGLSGLGTKVI 81
Query: 171 DEDE* 157
+E++*
Sbjct: 82 EEED* 86
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,772,749,885
Number of Sequences: 33410
Number of Extensions: 20772749885
Number of Successful Extensions: 658870499
Number of sequences better than 0.0: 0
|
