BLASTX 7.6.2

Query= UN42209 /QuerySize=754
        (753 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G01410.1 | Symbols:  | RNase H domain-containi...    147   8e-036
TAIR9_protein||AT3G01410.2 | Symbols:  | RNase H domain-containi...    147   8e-036
TAIR9_protein||AT5G51080.1 | Symbols:  | RNase H domain-containi...    109   3e-024
TAIR9_protein||AT5G51080.2 | Symbols:  | RNase H domain-containi...    109   3e-024
TAIR9_protein||AT5G51080.3 | Symbols:  | RNase H domain-containi...    109   3e-024
TAIR9_protein||AT1G24090.1 | Symbols:  | RNase H domain-containi...     96   3e-020

>TAIR9_protein||AT3G01410.1 | Symbols:  | RNase H domain-containing protein |
        chr3:153650-155439 REVERSE

          Length = 295

 Score =  147 bits (370), Expect = 8e-036
 Identities = 74/122 (60%), Positives = 91/122 (74%)
 Frame = +3

Query: 180 GAVLRASDNTVIYSSREGLGVATNNVAEYRALNLGLESALNQGFTNVRVQGDSQLVCKQV 359
           GAVLRASDN+V++  REG+G ATNNVAEYRAL LGL SAL++GF NV V GDS LVC QV
Sbjct: 173 GAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGFKNVHVLGDSMLVCMQV 232

Query: 360 RGEWATRDPKMTQLCGQAQELMSQFNSCDVQHVPREFNSAVDAQANRATNLAEGEYQQDN 539
           +G W T  PKM +LC QA+ELM+ F + D++H+ RE NS  D QAN A  LA+G+ Q  +
Sbjct: 233 QGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEADKQANSAIFLADGQTQVIS 292

Query: 540 AG 545
            G
Sbjct: 293 GG 294

>TAIR9_protein||AT3G01410.2 | Symbols:  | RNase H domain-containing protein |
        chr3:153650-155439 REVERSE

          Length = 295

 Score =  147 bits (370), Expect = 8e-036
 Identities = 74/122 (60%), Positives = 91/122 (74%)
 Frame = +3

Query: 180 GAVLRASDNTVIYSSREGLGVATNNVAEYRALNLGLESALNQGFTNVRVQGDSQLVCKQV 359
           GAVLRASDN+V++  REG+G ATNNVAEYRAL LGL SAL++GF NV V GDS LVC QV
Sbjct: 173 GAVLRASDNSVLFYLREGVGNATNNVAEYRALLLGLRSALDKGFKNVHVLGDSMLVCMQV 232

Query: 360 RGEWATRDPKMTQLCGQAQELMSQFNSCDVQHVPREFNSAVDAQANRATNLAEGEYQQDN 539
           +G W T  PKM +LC QA+ELM+ F + D++H+ RE NS  D QAN A  LA+G+ Q  +
Sbjct: 233 QGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSEADKQANSAIFLADGQTQVIS 292

Query: 540 AG 545
            G
Sbjct: 293 GG 294

>TAIR9_protein||AT5G51080.1 | Symbols:  | RNase H domain-containing protein |
        chr5:20769022-20770675 REVERSE

          Length = 323

 Score =  109 bits (270), Expect = 3e-024
 Identities = 55/141 (39%), Positives = 86/141 (60%), Gaps = 5/141 (3%)
 Frame = +3

Query: 123 DNSTDRIALCVDTTAYGRGG-----AVLRASDNTVIYSSREGLGVATNNVAEYRALNLGL 287
           D S +   +  D  + G  G     AVL+  D ++I+  R+GLG+ATNN AEY  L LGL
Sbjct: 180 DTSYETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGL 239

Query: 288 ESALNQGFTNVRVQGDSQLVCKQVRGEWATRDPKMTQLCGQAQELMSQFNSCDVQHVPRE 467
           + A+ +G+T ++V+ DS+LVC Q++G+W      +++L  +A++L  +  S ++ HV R 
Sbjct: 240 KHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRS 299

Query: 468 FNSAVDAQANRATNLAEGEYQ 530
            NS  D QAN A  L+EGE +
Sbjct: 300 LNSDADEQANMAARLSEGEVE 320

>TAIR9_protein||AT5G51080.2 | Symbols:  | RNase H domain-containing protein |
        chr5:20769022-20770675 REVERSE

          Length = 323

 Score =  109 bits (270), Expect = 3e-024
 Identities = 55/141 (39%), Positives = 86/141 (60%), Gaps = 5/141 (3%)
 Frame = +3

Query: 123 DNSTDRIALCVDTTAYGRGG-----AVLRASDNTVIYSSREGLGVATNNVAEYRALNLGL 287
           D S +   +  D  + G  G     AVL+  D ++I+  R+GLG+ATNN AEY  L LGL
Sbjct: 180 DTSYETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGL 239

Query: 288 ESALNQGFTNVRVQGDSQLVCKQVRGEWATRDPKMTQLCGQAQELMSQFNSCDVQHVPRE 467
           + A+ +G+T ++V+ DS+LVC Q++G+W      +++L  +A++L  +  S ++ HV R 
Sbjct: 240 KHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRS 299

Query: 468 FNSAVDAQANRATNLAEGEYQ 530
            NS  D QAN A  L+EGE +
Sbjct: 300 LNSDADEQANMAARLSEGEVE 320

>TAIR9_protein||AT5G51080.3 | Symbols:  | RNase H domain-containing protein |
        chr5:20769022-20770486 REVERSE

          Length = 260

 Score =  109 bits (270), Expect = 3e-024
 Identities = 55/141 (39%), Positives = 86/141 (60%), Gaps = 5/141 (3%)
 Frame = +3

Query: 123 DNSTDRIALCVDTTAYGRGG-----AVLRASDNTVIYSSREGLGVATNNVAEYRALNLGL 287
           D S +   +  D  + G  G     AVL+  D ++I+  R+GLG+ATNN AEY  L LGL
Sbjct: 117 DTSYETCIIEFDGASKGNPGLSGAAAVLKTEDGSLIFKMRQGLGIATNNAAEYHGLILGL 176

Query: 288 ESALNQGFTNVRVQGDSQLVCKQVRGEWATRDPKMTQLCGQAQELMSQFNSCDVQHVPRE 467
           + A+ +G+T ++V+ DS+LVC Q++G+W      +++L  +A++L  +  S ++ HV R 
Sbjct: 177 KHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISHVLRS 236

Query: 468 FNSAVDAQANRATNLAEGEYQ 530
            NS  D QAN A  L+EGE +
Sbjct: 237 LNSDADEQANMAARLSEGEVE 257

>TAIR9_protein||AT1G24090.1 | Symbols:  | RNase H domain-containing protein |
        chr1:8520834-8524690 FORWARD

          Length = 536

 Score =  96 bits (236), Expect = 3e-020
 Identities = 48/113 (42%), Positives = 74/113 (65%), Gaps = 3/113 (2%)
 Frame = +3

Query: 183 AVLRASDNTVIYSSREGLGVATNNVAEYRALNLGLESALNQGFTNVRVQGDSQLVC---K 353
           AVL+  D ++I   R+GLG+ATNN AEY AL LGL+ A+ +G+ N++V+GDS+LVC   +
Sbjct: 236 AVLKTEDGSLICRVRQGLGIATNNAAEYHALILGLKYAIEKGYKNIKVKGDSKLVCMQKQ 295

Query: 354 QVRGEWATRDPKMTQLCGQAQELMSQFNSCDVQHVPREFNSAVDAQANRATNL 512
           Q++G+W      + +L  +A+ L ++  S ++ HV R  N+  D QAN A  L
Sbjct: 296 QIKGQWKVNHEVLAKLHKEAKLLCNKCVSFEISHVLRNLNADADEQANLAVRL 348

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,795,870,354
Number of Sequences: 33410
Number of Extensions: 20795870354
Number of Successful Extensions: 658878764
Number of sequences better than 0.0: 0