BLASTX 7.6.2
Query= UN42367 /QuerySize=769
(768 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G23900.1 | Symbols: | 60S ribosomal protein L... 360 8e-100
TAIR9_protein||AT3G49010.1 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC... 351 3e-097
TAIR9_protein||AT3G49010.2 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC... 351 3e-097
TAIR9_protein||AT3G49010.3 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC... 351 3e-097
TAIR9_protein||AT3G49010.4 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC... 346 2e-095
TAIR9_protein||AT3G48960.1 | Symbols: | 60S ribosomal protein L... 317 6e-087
TAIR9_protein||AT3G49010.5 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC... 147 1e-035
>TAIR9_protein||AT5G23900.1 | Symbols: | 60S ribosomal protein L13 (RPL13D) |
chr5:8064176-8065081 REVERSE
Length = 207
Score = 360 bits (922), Expect = 8e-100
Identities = 180/207 (86%), Positives = 188/207 (90%)
Frame = +3
Query: 42 MKHNNEIQGSHFRKHWQNNVKTWFNQPARKTIRRVARQEKAVKIFPRPTSGPLRSVVHAQ 221
MKHNN I SHFRKHWQN VKTWFNQPARKT RRVARQ+KAVKIFPRPTSGPLR VVH Q
Sbjct: 1 MKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQ 60
Query: 222 TLKYNMKVRAGKGFSLEELKAAGIAKKLAPTIGISIDHRRKNRSLESLQSNVQRLKTYKA 401
TLKYNMKVRAGKGF+LEELK AGI KKLAPTIGIS+DHRRKNRSLE LQSNVQRLKTYKA
Sbjct: 61 TLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKA 120
Query: 402 KLVVFPRRSRVVKADDSTPEELANATQLQGDYMPISREKVAMELVKVTADMKTFKAYDKI 581
KLVVFPRRSR VKA DSTPEELANATQ+QGDYMPI+ K AMELVK+TAD+K FKAYDKI
Sbjct: 121 KLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKI 180
Query: 582 RLERTNKRHAGVRAKRAADAEKEEKK* 662
RLERTN RHAG RAKRAA+AEKEEKK*
Sbjct: 181 RLERTNARHAGARAKRAAEAEKEEKK* 207
>TAIR9_protein||AT3G49010.1 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC1 (ARABIDOPSIS
THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome
| chr3:18166971-18168047 REVERSE
Length = 207
Score = 351 bits (900), Expect = 3e-097
Identities = 171/207 (82%), Positives = 188/207 (90%)
Frame = +3
Query: 42 MKHNNEIQGSHFRKHWQNNVKTWFNQPARKTIRRVARQEKAVKIFPRPTSGPLRSVVHAQ 221
MKHNN I HF+KHWQN VKTWFNQPARKT RR+ARQ+KAVKIFPRPTSGPLR VVH Q
Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60
Query: 222 TLKYNMKVRAGKGFSLEELKAAGIAKKLAPTIGISIDHRRKNRSLESLQSNVQRLKTYKA 401
TLKYNMKVR GKGF+LEELKAAGI KKLAPTIGI++DHRRKNRSLE LQ+NVQRLKTYK
Sbjct: 61 TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120
Query: 402 KLVVFPRRSRVVKADDSTPEELANATQLQGDYMPISREKVAMELVKVTADMKTFKAYDKI 581
KLV+FPRR+R VKA DSTPEELANATQ+QGDY+PI REK MELVK+T++MK+FKA+DKI
Sbjct: 121 KLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180
Query: 582 RLERTNKRHAGVRAKRAADAEKEEKK* 662
RLERTNKRHAG RAKRAA+AEKEEKK*
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK* 207
>TAIR9_protein||AT3G49010.2 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC1 (ARABIDOPSIS
THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome
| chr3:18166971-18168047 REVERSE
Length = 207
Score = 351 bits (900), Expect = 3e-097
Identities = 171/207 (82%), Positives = 188/207 (90%)
Frame = +3
Query: 42 MKHNNEIQGSHFRKHWQNNVKTWFNQPARKTIRRVARQEKAVKIFPRPTSGPLRSVVHAQ 221
MKHNN I HF+KHWQN VKTWFNQPARKT RR+ARQ+KAVKIFPRPTSGPLR VVH Q
Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60
Query: 222 TLKYNMKVRAGKGFSLEELKAAGIAKKLAPTIGISIDHRRKNRSLESLQSNVQRLKTYKA 401
TLKYNMKVR GKGF+LEELKAAGI KKLAPTIGI++DHRRKNRSLE LQ+NVQRLKTYK
Sbjct: 61 TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120
Query: 402 KLVVFPRRSRVVKADDSTPEELANATQLQGDYMPISREKVAMELVKVTADMKTFKAYDKI 581
KLV+FPRR+R VKA DSTPEELANATQ+QGDY+PI REK MELVK+T++MK+FKA+DKI
Sbjct: 121 KLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180
Query: 582 RLERTNKRHAGVRAKRAADAEKEEKK* 662
RLERTNKRHAG RAKRAA+AEKEEKK*
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK* 207
>TAIR9_protein||AT3G49010.3 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC1 (ARABIDOPSIS
THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome
| chr3:18166971-18168047 REVERSE
Length = 207
Score = 351 bits (900), Expect = 3e-097
Identities = 171/207 (82%), Positives = 188/207 (90%)
Frame = +3
Query: 42 MKHNNEIQGSHFRKHWQNNVKTWFNQPARKTIRRVARQEKAVKIFPRPTSGPLRSVVHAQ 221
MKHNN I HF+KHWQN VKTWFNQPARKT RR+ARQ+KAVKIFPRPTSGPLR VVH Q
Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60
Query: 222 TLKYNMKVRAGKGFSLEELKAAGIAKKLAPTIGISIDHRRKNRSLESLQSNVQRLKTYKA 401
TLKYNMKVR GKGF+LEELKAAGI KKLAPTIGI++DHRRKNRSLE LQ+NVQRLKTYK
Sbjct: 61 TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120
Query: 402 KLVVFPRRSRVVKADDSTPEELANATQLQGDYMPISREKVAMELVKVTADMKTFKAYDKI 581
KLV+FPRR+R VKA DSTPEELANATQ+QGDY+PI REK MELVK+T++MK+FKA+DKI
Sbjct: 121 KLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180
Query: 582 RLERTNKRHAGVRAKRAADAEKEEKK* 662
RLERTNKRHAG RAKRAA+AEKEEKK*
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK* 207
>TAIR9_protein||AT3G49010.4 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC1 (ARABIDOPSIS
THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome
| chr3:18166971-18168047 REVERSE
Length = 205
Score = 346 bits (885), Expect = 2e-095
Identities = 170/207 (82%), Positives = 187/207 (90%), Gaps = 2/207 (0%)
Frame = +3
Query: 42 MKHNNEIQGSHFRKHWQNNVKTWFNQPARKTIRRVARQEKAVKIFPRPTSGPLRSVVHAQ 221
MKHNN I HF+KHWQN VKTWFNQPARKT RR+ARQ+KAVKIFPRPTSGPLR VVH Q
Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60
Query: 222 TLKYNMKVRAGKGFSLEELKAAGIAKKLAPTIGISIDHRRKNRSLESLQSNVQRLKTYKA 401
TLKYNMKVR GKGF+LEELKAAGI KKLAPTIGI++DHRRKNRSLE LQ+NVQRLKTYK
Sbjct: 61 TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120
Query: 402 KLVVFPRRSRVVKADDSTPEELANATQLQGDYMPISREKVAMELVKVTADMKTFKAYDKI 581
KLV+FPRR+R KA DSTPEELANATQ+QGDY+PI REK MELVK+T++MK+FKA+DKI
Sbjct: 121 KLVIFPRRAR--KAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 178
Query: 582 RLERTNKRHAGVRAKRAADAEKEEKK* 662
RLERTNKRHAG RAKRAA+AEKEEKK*
Sbjct: 179 RLERTNKRHAGARAKRAAEAEKEEKK* 205
>TAIR9_protein||AT3G48960.1 | Symbols: | 60S ribosomal protein L13 (RPL13C) |
chr3:18150444-18151412 REVERSE
Length = 207
Score = 317 bits (811), Expect = 6e-087
Identities = 159/207 (76%), Positives = 175/207 (84%)
Frame = +3
Query: 42 MKHNNEIQGSHFRKHWQNNVKTWFNQPARKTIRRVARQEKAVKIFPRPTSGPLRSVVHAQ 221
MKHNN I HF+K W+N VKT FNQPA KT RR+ARQ KAVKIFPRPT+GP+R VVHAQ
Sbjct: 1 MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQ 60
Query: 222 TLKYNMKVRAGKGFSLEELKAAGIAKKLAPTIGISIDHRRKNRSLESLQSNVQRLKTYKA 401
TL YNMKVRAGKGF+LEELKAAGI KKLAPTIGIS+DH RKNRSLE Q+NVQRLKTYKA
Sbjct: 61 TLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKA 120
Query: 402 KLVVFPRRSRVVKADDSTPEELANATQLQGDYMPISREKVAMELVKVTADMKTFKAYDKI 581
KLV+FPR +R VK DS +ELANATQ+Q D+MPI RE MELVK+T+DMK F AYDKI
Sbjct: 121 KLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKI 180
Query: 582 RLERTNKRHAGVRAKRAADAEKEEKK* 662
RLE NKRHAGVRAKRAA+AEKEEKK*
Sbjct: 181 RLEGINKRHAGVRAKRAAEAEKEEKK* 207
>TAIR9_protein||AT3G49010.5 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC1 (ARABIDOPSIS
THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome
| chr3:18166971-18168047 REVERSE
Length = 154
Score = 147 bits (369), Expect = 1e-035
Identities = 77/124 (62%), Positives = 91/124 (73%), Gaps = 5/124 (4%)
Frame = +3
Query: 42 MKHNNEIQGSHFRKHWQNNVKTWFNQPARKTIRRVARQEKAVKIFPRPTSGPLRSVVHAQ 221
MKHNN I HF+KHWQN VKTWFNQPARKT RR+ARQ+KAVKIFPRPTSGPLR VVH Q
Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60
Query: 222 TLKYNMKVRAGKGFSLEELKAA-GIAKKLAPTIGISIDHR---RKNRSLESLQSNVQRLK 389
TLKYNMKVR GKGF+LEELKA ++LA + D+ R+ ++E L +K
Sbjct: 61 TLKYNMKVRTGKGFTLEELKAGDSTPEELANATQVQGDYLPIVREKPTME-LVKLTSEMK 119
Query: 390 TYKA 401
++KA
Sbjct: 120 SFKA 123
Score = 126 bits (316), Expect = 1e-029
Identities = 61/76 (80%), Positives = 70/76 (92%)
Frame = +3
Query: 435 VKADDSTPEELANATQLQGDYMPISREKVAMELVKVTADMKTFKAYDKIRLERTNKRHAG 614
+KA DSTPEELANATQ+QGDY+PI REK MELVK+T++MK+FKA+DKIRLERTNKRHAG
Sbjct: 79 LKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAG 138
Query: 615 VRAKRAADAEKEEKK* 662
RAKRAA+AEKEEKK*
Sbjct: 139 ARAKRAAEAEKEEKK* 154
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,795,870,354
Number of Sequences: 33410
Number of Extensions: 20795870354
Number of Successful Extensions: 658878764
Number of sequences better than 0.0: 0
|
