BLASTX 7.6.2
Query= UN42388 /QuerySize=974
(973 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15218373|ref|NP_173045.1| 40S ribosomal protein S12-1 [Arabid... 176 6e-042
gi|15225180|ref|NP_180766.1| 40S ribosomal protein S12-2 [Arabid... 170 3e-040
gi|297840031|ref|XP_002887897.1| predicted protein [Arabidopsis ... 160 3e-037
gi|297844514|ref|XP_002890138.1| 40S ribosomal protein S12 [Arab... 156 8e-036
gi|297826663|ref|XP_002881214.1| 40S ribosomal protein S12 [Arab... 150 3e-034
gi|118482209|gb|ABK93033.1| unknown [Populus trichocarpa] 149 1e-033
gi|224082596|ref|XP_002306757.1| predicted protein [Populus tric... 148 2e-033
gi|224066545|ref|XP_002302129.1| predicted protein [Populus tric... 147 3e-033
gi|118489778|gb|ABK96689.1| unknown [Populus trichocarpa x Popul... 145 1e-032
gi|118482257|gb|ABK93056.1| unknown [Populus trichocarpa] 145 1e-032
gi|225465502|ref|XP_002272092.1| PREDICTED: hypothetical protein... 145 1e-032
gi|297745090|emb|CBI38929.3| unnamed protein product [Vitis vini... 145 1e-032
gi|255561172|ref|XP_002521598.1| 40S ribosomal protein S12, puta... 144 2e-032
gi|225445883|ref|XP_002279327.1| PREDICTED: hypothetical protein... 142 9e-032
gi|297743635|emb|CBI36518.3| unnamed protein product [Vitis vini... 142 9e-032
gi|255626315|gb|ACU13502.1| unknown [Glycine max] 141 2e-031
gi|12229949|sp|Q9XHS0.1|RS12_HORVU RecName: Full=40S ribosomal p... 141 2e-031
gi|255629085|gb|ACU14887.1| unknown [Glycine max] 141 2e-031
gi|224057549|ref|XP_002299262.1| predicted protein [Populus tric... 140 4e-031
gi|255572745|ref|XP_002527305.1| 40S ribosomal protein S12, puta... 140 4e-031
>gi|15218373|ref|NP_173045.1| 40S ribosomal protein S12-1 [Arabidopsis
thaliana]
Length = 144
Score = 176 bits (445), Expect = 6e-042
Identities = 92/107 (85%), Positives = 97/107 (90%), Gaps = 2/107 (1%)
Frame = -2
Query: 831 DEAAPVAV-PPVAEPAAIIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQL 655
DEAAPV V PPVAEPAA IPEDMDL+TALELTLRKARA+GGVVRGLHE AKLIEKRVAQL
Sbjct: 4 DEAAPVVVPPPVAEPAA-IPEDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRVAQL 62
Query: 654 CVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
VLAEDCNQPDYVKLVKALCADH + LLTVPSAKTLGEWAG+ + S
Sbjct: 63 VVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDS 109
>gi|15225180|ref|NP_180766.1| 40S ribosomal protein S12-2 [Arabidopsis
thaliana]
Length = 144
Score = 170 bits (430), Expect = 3e-040
Identities = 89/104 (85%), Positives = 96/104 (92%), Gaps = 2/104 (1%)
Frame = -2
Query: 825 AAPVAVPPVAEPAAIIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQLCVL 646
AAPV VPPVAE AA+IPEDMD+ TALELT+RK+RA+GGVVRGLHESAKLIEKR AQLCVL
Sbjct: 8 AAPV-VPPVAE-AAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNAQLCVL 65
Query: 645 AEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
AEDCNQPDYVKLVKALCADHSI LLTVPSAKTLGEWAG+ + S
Sbjct: 66 AEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDS 109
>gi|297840031|ref|XP_002887897.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 140
Score = 160 bits (404), Expect = 3e-037
Identities = 81/99 (81%), Positives = 88/99 (88%), Gaps = 1/99 (1%)
Frame = -2
Query: 810 VPPVAEPAAIIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQLCVLAEDCN 631
V PV E AA+IPEDMDL+TA ELT+RK+ A+GGVVRGLHES KLIEKRVAQLCVLAEDCN
Sbjct: 8 VAPVVE-AAVIPEDMDLMTAAELTIRKSCAYGGVVRGLHESTKLIEKRVAQLCVLAEDCN 66
Query: 630 QPDYVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
QPDYVKLV ALC DH+INLLTVPSAKTLGEWAG+ L S
Sbjct: 67 QPDYVKLVTALCTDHNINLLTVPSAKTLGEWAGLCKLDS 105
>gi|297844514|ref|XP_002890138.1| 40S ribosomal protein S12 [Arabidopsis lyrata
subsp. lyrata]
Length = 120
Score = 156 bits (392), Expect = 8e-036
Identities = 77/85 (90%), Positives = 82/85 (96%)
Frame = -2
Query: 768 MDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQLCVLAEDCNQPDYVKLVKALCAD 589
MDL+TALELTLRKARA+GGVVRGLHESAKLIEKRVAQLCVLAEDCNQPDYVKLVKALCAD
Sbjct: 1 MDLMTALELTLRKARAYGGVVRGLHESAKLIEKRVAQLCVLAEDCNQPDYVKLVKALCAD 60
Query: 588 HSINLLTVPSAKTLGEWAGVSHLIS 514
HSI+LLTVPSAKTLGEWAG+ + S
Sbjct: 61 HSISLLTVPSAKTLGEWAGLCKIDS 85
>gi|297826663|ref|XP_002881214.1| 40S ribosomal protein S12 [Arabidopsis lyrata
subsp. lyrata]
Length = 120
Score = 150 bits (378), Expect = 3e-034
Identities = 74/85 (87%), Positives = 80/85 (94%)
Frame = -2
Query: 768 MDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQLCVLAEDCNQPDYVKLVKALCAD 589
MD+ TALELT+RK+RA+GGVVRGLHESAKLIEKRVAQLCVLAEDCNQPDYVKLVKALCAD
Sbjct: 1 MDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRVAQLCVLAEDCNQPDYVKLVKALCAD 60
Query: 588 HSINLLTVPSAKTLGEWAGVSHLIS 514
HSI LLTVPSAKTLGEWAG+ + S
Sbjct: 61 HSIKLLTVPSAKTLGEWAGLCKIDS 85
>gi|118482209|gb|ABK93033.1| unknown [Populus trichocarpa]
Length = 143
Score = 149 bits (374), Expect = 1e-033
Identities = 73/107 (68%), Positives = 83/107 (77%)
Frame = -2
Query: 834 SDEAAPVAVPPVAEPAAIIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQL 655
S E P VP AE A E MDL+TAL+L L+K+ AHGG+ RGLHE AK+IEK AQL
Sbjct: 2 SSEETPAPVPAPAETPAQPLEAMDLMTALQLVLKKSLAHGGLARGLHEGAKVIEKHAAQL 61
Query: 654 CVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
CVLAEDCNQPDY+KLVKALCADH + LLTVPSAKTLGEWAG+ + S
Sbjct: 62 CVLAEDCNQPDYIKLVKALCADHGVGLLTVPSAKTLGEWAGLCKIDS 108
>gi|224082596|ref|XP_002306757.1| predicted protein [Populus trichocarpa]
Length = 146
Score = 148 bits (371), Expect = 2e-033
Identities = 71/98 (72%), Positives = 82/98 (83%)
Frame = -2
Query: 807 PPVAEPAAIIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQLCVLAEDCNQ 628
P VA+ A + E MDL+TAL+L LRK+ AHGG+ RGLHE AK+IEK AQLCVLAEDCNQ
Sbjct: 14 PAVADAPAPLGEPMDLMTALQLVLRKSLAHGGLSRGLHEGAKMIEKHTAQLCVLAEDCNQ 73
Query: 627 PDYVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
PDYVKLVKALCADH +NLL+VPSAKTLGEWAG+ + S
Sbjct: 74 PDYVKLVKALCADHKVNLLSVPSAKTLGEWAGLCKIDS 111
>gi|224066545|ref|XP_002302129.1| predicted protein [Populus trichocarpa]
Length = 145
Score = 147 bits (370), Expect = 3e-033
Identities = 73/107 (68%), Positives = 85/107 (79%), Gaps = 7/107 (6%)
Frame = -2
Query: 834 SDEAAPVAVPPVAEPAAIIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQL 655
++ A VPP+ EP MDL+TAL+L LRK+ AHGG+ RGLHE AK+IEK AQL
Sbjct: 11 TETPAVADVPPLGEP-------MDLMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQL 63
Query: 654 CVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
CVLAEDCNQPDYVKLVKALCADH++NLLTVPSAKTLGEWAG+ + S
Sbjct: 64 CVLAEDCNQPDYVKLVKALCADHNVNLLTVPSAKTLGEWAGLCKIDS 110
>gi|118489778|gb|ABK96689.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 148
Score = 145 bits (365), Expect = 1e-032
Identities = 70/96 (72%), Positives = 81/96 (84%)
Frame = -2
Query: 801 VAEPAAIIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQLCVLAEDCNQPD 622
VA+ A + E MDL+TAL+L LRK+ AHGG+ RGLHE AK+IEK AQLCVLAEDCNQPD
Sbjct: 18 VADAPAPLGEPMDLMTALQLVLRKSLAHGGLSRGLHEGAKMIEKHTAQLCVLAEDCNQPD 77
Query: 621 YVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
YVKLVKALCADH +NLL+VPSAKTLGEWAG+ + S
Sbjct: 78 YVKLVKALCADHKVNLLSVPSAKTLGEWAGLCKIDS 113
>gi|118482257|gb|ABK93056.1| unknown [Populus trichocarpa]
Length = 144
Score = 145 bits (364), Expect = 1e-032
Identities = 73/105 (69%), Positives = 83/105 (79%), Gaps = 7/105 (6%)
Frame = -2
Query: 828 EAAPVAVPPVAEPAAIIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQLCV 649
E VA P+ EP MDL+TAL+L LRK+ AHGG+ RGLHE AK+IEK AQLCV
Sbjct: 12 ETPAVADVPLGEP-------MDLMTALQLVLRKSLAHGGLSRGLHEGAKVIEKHAAQLCV 64
Query: 648 LAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
LAEDCNQPDYVKLVKALCADH++NLLTVPSAKTLGEWAG+ + S
Sbjct: 65 LAEDCNQPDYVKLVKALCADHNVNLLTVPSAKTLGEWAGLCKIDS 109
>gi|225465502|ref|XP_002272092.1| PREDICTED: hypothetical protein isoform 2
[Vitis vinifera]
Length = 142
Score = 145 bits (364), Expect = 1e-032
Identities = 73/107 (68%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Frame = -2
Query: 834 SDEAAPVAVPPVAEPAAIIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQL 655
S E VAV A PA + E MDL+TAL+L LRK+ AHGG+ RGLHE AK+IEK A L
Sbjct: 2 SGEEVVVAVETSA-PAPALGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHL 60
Query: 654 CVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
CVLAEDCNQPDYVKLVKALCADH+++L+TVPSAKTLGEWAG+ + S
Sbjct: 61 CVLAEDCNQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDS 107
>gi|297745090|emb|CBI38929.3| unnamed protein product [Vitis vinifera]
Length = 228
Score = 145 bits (364), Expect = 1e-032
Identities = 73/107 (68%), Positives = 85/107 (79%), Gaps = 1/107 (0%)
Frame = -2
Query: 834 SDEAAPVAVPPVAEPAAIIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQL 655
S E VAV A PA + E MDL+TAL+L LRK+ AHGG+ RGLHE AK+IEK A L
Sbjct: 88 SGEEVVVAVETSA-PAPALGEPMDLMTALQLVLRKSLAHGGLARGLHEGAKVIEKHAAHL 146
Query: 654 CVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
CVLAEDCNQPDYVKLVKALCADH+++L+TVPSAKTLGEWAG+ + S
Sbjct: 147 CVLAEDCNQPDYVKLVKALCADHNVSLITVPSAKTLGEWAGLCKIDS 193
>gi|255561172|ref|XP_002521598.1| 40S ribosomal protein S12, putative [Ricinus
communis]
Length = 146
Score = 144 bits (363), Expect = 2e-032
Identities = 71/110 (64%), Positives = 85/110 (77%), Gaps = 3/110 (2%)
Frame = -2
Query: 834 SDEAAPVAVPPVAE---PAAIIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRV 664
S E VAV E PA + E MDL+TAL+L LRK+ AHGG++RGLHE+AK+IEK
Sbjct: 2 SGEEGAVAVAVAVEAAAPAQPLGEPMDLMTALQLVLRKSLAHGGLIRGLHEAAKVIEKNA 61
Query: 663 AQLCVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
AQLCV+AEDCNQPDYVKL+K +CADH + LLTVPSAKTLGEWAG+ + S
Sbjct: 62 AQLCVIAEDCNQPDYVKLIKGICADHGVGLLTVPSAKTLGEWAGLCKIDS 111
>gi|225445883|ref|XP_002279327.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 140
Score = 142 bits (357), Expect = 9e-032
Identities = 69/98 (70%), Positives = 83/98 (84%), Gaps = 2/98 (2%)
Frame = -2
Query: 801 VAEPAAIIP--EDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQLCVLAEDCNQ 628
V E AA P E +DL+TAL+L LRK+ AHGG+VRGLHE AK+IEK AQLCVLAEDCNQ
Sbjct: 8 VVEAAAAPPLGETLDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQLCVLAEDCNQ 67
Query: 627 PDYVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
PDY+KLVKALCADH+++L++VPSAKTLGEWAG+ + S
Sbjct: 68 PDYIKLVKALCADHNVSLISVPSAKTLGEWAGLCKIDS 105
>gi|297743635|emb|CBI36518.3| unnamed protein product [Vitis vinifera]
Length = 177
Score = 142 bits (357), Expect = 9e-032
Identities = 69/98 (70%), Positives = 83/98 (84%), Gaps = 2/98 (2%)
Frame = -2
Query: 801 VAEPAAIIP--EDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQLCVLAEDCNQ 628
V E AA P E +DL+TAL+L LRK+ AHGG+VRGLHE AK+IEK AQLCVLAEDCNQ
Sbjct: 45 VVEAAAAPPLGETLDLMTALQLVLRKSLAHGGLVRGLHEGAKVIEKHAAQLCVLAEDCNQ 104
Query: 627 PDYVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
PDY+KLVKALCADH+++L++VPSAKTLGEWAG+ + S
Sbjct: 105 PDYIKLVKALCADHNVSLISVPSAKTLGEWAGLCKIDS 142
>gi|255626315|gb|ACU13502.1| unknown [Glycine max]
Length = 140
Score = 141 bits (355), Expect = 2e-031
Identities = 69/96 (71%), Positives = 83/96 (86%), Gaps = 1/96 (1%)
Frame = -2
Query: 798 AEPAAIIP-EDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQLCVLAEDCNQPD 622
AEPAA IP E MD++TAL+L L K+ A+GG+ RGLHE AK+IEK AQLCVLAEDC+QPD
Sbjct: 10 AEPAAAIPGEPMDIMTALQLVLGKSLAYGGLARGLHEGAKVIEKHAAQLCVLAEDCDQPD 69
Query: 621 YVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
YVKLVKALCA+H+++LLTVPSAKTLGEWAG+ + S
Sbjct: 70 YVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDS 105
>gi|12229949|sp|Q9XHS0.1|RS12_HORVU RecName: Full=40S ribosomal protein S12
Length = 143
Score = 141 bits (354), Expect = 2e-031
Identities = 66/102 (64%), Positives = 84/102 (82%)
Frame = -2
Query: 834 SDEAAPVAVPPVAEPAAIIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQL 655
++EA V PV P I+ E MDL+TAL+L ++K+ AH G+V+GL E+AK IEK AQL
Sbjct: 2 AEEAPAPVVAPVEAPTPILGEPMDLMTALQLVMKKSSAHDGLVKGLREAAKSIEKHAAQL 61
Query: 654 CVLAEDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGV 529
CVLAEDC+QPDYVKLVKALCA+H+++L+TVPSAKTLGEWAG+
Sbjct: 62 CVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGL 103
>gi|255629085|gb|ACU14887.1| unknown [Glycine max]
Length = 141
Score = 141 bits (354), Expect = 2e-031
Identities = 69/101 (68%), Positives = 84/101 (83%)
Frame = -2
Query: 816 VAVPPVAEPAAIIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQLCVLAED 637
VAV A A+I E MD++TAL+L LRK+ A+GG+ RGLHE AK+IEK AQLCVLAED
Sbjct: 6 VAVAAEAPAASIPGEPMDIMTALQLVLRKSLAYGGLARGLHEGAKVIEKHAAQLCVLAED 65
Query: 636 CNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
C+QPDYVKLVKALCA+H+++LLTVPSAKTLGEWAG+ + S
Sbjct: 66 CDQPDYVKLVKALCAEHNVSLLTVPSAKTLGEWAGLCKIDS 106
>gi|224057549|ref|XP_002299262.1| predicted protein [Populus trichocarpa]
Length = 131
Score = 140 bits (352), Expect = 4e-031
Identities = 68/95 (71%), Positives = 78/95 (82%)
Frame = -2
Query: 798 AEPAAIIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQLCVLAEDCNQPDY 619
AE A E MDL+TAL+L L+K+ AHGG+ RGLHE AK+IEK AQLCVLAEDCNQPDY
Sbjct: 2 AETPAQPLEAMDLMTALQLVLKKSLAHGGLARGLHEGAKVIEKHAAQLCVLAEDCNQPDY 61
Query: 618 VKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
+KLVKALCADH + LLTVPSAKTLGEWAG+ + S
Sbjct: 62 IKLVKALCADHGVGLLTVPSAKTLGEWAGLCKIDS 96
>gi|255572745|ref|XP_002527305.1| 40S ribosomal protein S12, putative [Ricinus
communis]
Length = 145
Score = 140 bits (352), Expect = 4e-031
Identities = 69/103 (66%), Positives = 81/103 (78%), Gaps = 3/103 (2%)
Frame = -2
Query: 822 APVAVPPVAEPAAIIPEDMDLLTALELTLRKARAHGGVVRGLHESAKLIEKRVAQLCVLA 643
A VA +P + E MD++TAL+L L+K+ AHGG+ RGLHESAKLIEK AQLCV+A
Sbjct: 11 AAVAAETATQP---LGEAMDIMTALQLVLKKSLAHGGLARGLHESAKLIEKNAAQLCVIA 67
Query: 642 EDCNQPDYVKLVKALCADHSINLLTVPSAKTLGEWAGVSHLIS 514
EDCNQPDYVKL+K LCADH I LLTVPSAKTLGEWAG+ + S
Sbjct: 68 EDCNQPDYVKLLKGLCADHGIGLLTVPSAKTLGEWAGLCKIDS 110
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,661,099,900,368
Number of Sequences: 15229318
Number of Extensions: 4661099900368
Number of Successful Extensions: 1115645755
Number of sequences better than 0.0: 0
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