BLASTX 7.6.2
Query= UN42646 /QuerySize=2001
(2000 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G22380.1 | Symbols: TIC | TIC (TIME FOR COFFEE... 677 1e-194
TAIR9_protein||AT3G22380.2 | Symbols: TIC | TIC (TIME FOR COFFEE... 677 1e-194
TAIR9_protein||AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF1... 53 6e-007
>TAIR9_protein||AT3G22380.1 | Symbols: TIC | TIC (TIME FOR COFFEE) |
chr3:7913181-7918879 FORWARD
Length = 1551
Score = 677 bits (1745), Expect = 1e-194
Identities = 366/465 (78%), Positives = 391/465 (84%), Gaps = 22/465 (4%)
Frame = +3
Query: 12 QLRPPINPGNSQGFPTHKVQSQPMSFQQR-QPRENATQHSETVGGDSPSTADSRGSRSSV 188
QLRPPIN GNSQGFPTHKVQSQP++FQQR QPRENATQHSETVG DSPSTADSRGSRS+V
Sbjct: 916 QLRPPINHGNSQGFPTHKVQSQPLNFQQRQQPRENATQHSETVGEDSPSTADSRGSRSNV 975
Query: 189 AYGQNYGMQMQPTNLGLMSSAAPAGGVVVSSSNHGEKK-PQQVSKAGGESFPPQGYAMTF 365
AYGQNYGMQMQPTNLGLMSS AP GGVV SSS+HGEKK QQVSKAG ESF GYAMTF
Sbjct: 976 AYGQNYGMQMQPTNLGLMSSPAPGGGVVGSSSSHGEKKSQQQVSKAGVESFQSPGYAMTF 1035
Query: 366 ATFNGANSTPSLNMSAIPQNHAMFHSIPEAARQGYQMMAANVAAQAAQQKMNYSAPSDDG 545
ATFNGAN+ P+LNMS+I QNHAMFHS+PEAARQGYQMM AAQAAQQKMNY A +DG
Sbjct: 1036 ATFNGANTAPTLNMSSIAQNHAMFHSMPEAARQGYQMM----AAQAAQQKMNYGASLEDG 1091
Query: 546 KSGS----NTTTNTREEQRKT-GAATGKTSGLNGAQSIAFSNKPDLADTSVSAVTSGSIV 710
KSGS T NT EEQRK+ G A GKTSG NG QSIAFSNK DLAD SVSAVTSGSIV
Sbjct: 1092 KSGSIGGAATANNTPEEQRKSGGGAIGKTSGGNGGQSIAFSNKQDLADASVSAVTSGSIV 1151
Query: 711 D-TSRLHNHGSTQPQSSSSVLTSHQQQQLQHLQQQHQQQQQQQQHMQRSQLQQPYTTMYL 887
D +SRL N GS PQSS S+ TSH QQ L QQQQQQHMQRSQ QQPYTTMYL
Sbjct: 1152 DSSSRLLNLGSALPQSSGSLPTSHHQQLL---------QQQQQQHMQRSQSQQPYTTMYL 1202
Query: 888 QKQQRYATSVAASAAKTKGPVAASNGSGFPDHNISVSPAGSTKFTNANSGFPQNLVQSSS 1067
QKQQRYATSVAASAA+TKGPV SNGSGFPDHN++ SPAG+TKF NANSGFPQNLVQSSS
Sbjct: 1203 QKQQRYATSVAASAARTKGPV-VSNGSGFPDHNMTTSPAGTTKFANANSGFPQNLVQSSS 1261
Query: 1068 TQAQSPQWKNNSPRASNTSQAQSPSILSPSSSAAAASSVRNVSHKQQSRPQQSQISFAAN 1247
Q QS QWKNNSPR +NT+QAQSPS+LSPS+S AAASS+RN+ HKQQSRPQQSQISFAAN
Sbjct: 1262 NQVQSQQWKNNSPRTTNTTQAQSPSMLSPSTSVAAASSLRNIPHKQQSRPQQSQISFAAN 1321
Query: 1248 SKPMASGSSMQQVQGGTNNQAPSPPMLVGSPSTSSGLQKRGWEPK 1382
SKPM SGS MQQVQGGTN+QAPSPPMLVGSPSTSS + P+
Sbjct: 1322 SKPMTSGSPMQQVQGGTNHQAPSPPMLVGSPSTSSVSKNASGSPR 1366
Score = 289 bits (737), Expect = 8e-078
Identities = 158/208 (75%), Positives = 172/208 (82%), Gaps = 16/208 (7%)
Frame = +1
Query: 1354 VSRSAGGSPRTTASASSAVNKTVQASSTTHSSSQPPKNQQSSSAASPAGGRNNGPSVLGN 1533
VS++A GSPRTTASASSA NK QAS+TTHS+SQP KN Q +SAAS AGGRNNGPSVLGN
Sbjct: 1357 VSKNASGSPRTTASASSAANKGGQASTTTHSASQPSKNLQPASAASSAGGRNNGPSVLGN 1416
Query: 1534 PTTSSGSKSQQQQQQLPKHGLQQQSQLFFSNPYMQSQHQHQQQQITV-PPGGYYIQRQQQ 1710
PTTSSGSKS QQQQQLPKHGLQ Q+QLFFSNPYMQ+QHQHQQQQIT+ P GGYYIQR QQ
Sbjct: 1417 PTTSSGSKS-QQQQQLPKHGLQPQAQLFFSNPYMQAQHQHQQQQITISPSGGYYIQRHQQ 1475
Query: 1711 QPGSSAAASTAVCHPVSLSACTIGAVTTTSDPAKAMAAAAAASNMK--GGVGKTQQHQLV 1884
Q GS+ A PV+ GAVT TSDPAKA+AAA+AA+NMK GG+GKTQQHQL
Sbjct: 1476 QSGSAPAV------PVT------GAVTATSDPAKAIAAASAANNMKGGGGMGKTQQHQLG 1523
Query: 1885 PPGFPYVHAVPSAVQVKPVDQKQQAGE* 1968
PPGF VHAV SAVQVKPVDQKQQAGE*
Sbjct: 1524 PPGFTNVHAVSSAVQVKPVDQKQQAGE* 1551
>TAIR9_protein||AT3G22380.2 | Symbols: TIC | TIC (TIME FOR COFFEE) |
chr3:7913181-7918967 FORWARD
Length = 1556
Score = 677 bits (1745), Expect = 1e-194
Identities = 366/465 (78%), Positives = 391/465 (84%), Gaps = 22/465 (4%)
Frame = +3
Query: 12 QLRPPINPGNSQGFPTHKVQSQPMSFQQR-QPRENATQHSETVGGDSPSTADSRGSRSSV 188
QLRPPIN GNSQGFPTHKVQSQP++FQQR QPRENATQHSETVG DSPSTADSRGSRS+V
Sbjct: 916 QLRPPINHGNSQGFPTHKVQSQPLNFQQRQQPRENATQHSETVGEDSPSTADSRGSRSNV 975
Query: 189 AYGQNYGMQMQPTNLGLMSSAAPAGGVVVSSSNHGEKK-PQQVSKAGGESFPPQGYAMTF 365
AYGQNYGMQMQPTNLGLMSS AP GGVV SSS+HGEKK QQVSKAG ESF GYAMTF
Sbjct: 976 AYGQNYGMQMQPTNLGLMSSPAPGGGVVGSSSSHGEKKSQQQVSKAGVESFQSPGYAMTF 1035
Query: 366 ATFNGANSTPSLNMSAIPQNHAMFHSIPEAARQGYQMMAANVAAQAAQQKMNYSAPSDDG 545
ATFNGAN+ P+LNMS+I QNHAMFHS+PEAARQGYQMM AAQAAQQKMNY A +DG
Sbjct: 1036 ATFNGANTAPTLNMSSIAQNHAMFHSMPEAARQGYQMM----AAQAAQQKMNYGASLEDG 1091
Query: 546 KSGS----NTTTNTREEQRKT-GAATGKTSGLNGAQSIAFSNKPDLADTSVSAVTSGSIV 710
KSGS T NT EEQRK+ G A GKTSG NG QSIAFSNK DLAD SVSAVTSGSIV
Sbjct: 1092 KSGSIGGAATANNTPEEQRKSGGGAIGKTSGGNGGQSIAFSNKQDLADASVSAVTSGSIV 1151
Query: 711 D-TSRLHNHGSTQPQSSSSVLTSHQQQQLQHLQQQHQQQQQQQQHMQRSQLQQPYTTMYL 887
D +SRL N GS PQSS S+ TSH QQ L QQQQQQHMQRSQ QQPYTTMYL
Sbjct: 1152 DSSSRLLNLGSALPQSSGSLPTSHHQQLL---------QQQQQQHMQRSQSQQPYTTMYL 1202
Query: 888 QKQQRYATSVAASAAKTKGPVAASNGSGFPDHNISVSPAGSTKFTNANSGFPQNLVQSSS 1067
QKQQRYATSVAASAA+TKGPV SNGSGFPDHN++ SPAG+TKF NANSGFPQNLVQSSS
Sbjct: 1203 QKQQRYATSVAASAARTKGPV-VSNGSGFPDHNMTTSPAGTTKFANANSGFPQNLVQSSS 1261
Query: 1068 TQAQSPQWKNNSPRASNTSQAQSPSILSPSSSAAAASSVRNVSHKQQSRPQQSQISFAAN 1247
Q QS QWKNNSPR +NT+QAQSPS+LSPS+S AAASS+RN+ HKQQSRPQQSQISFAAN
Sbjct: 1262 NQVQSQQWKNNSPRTTNTTQAQSPSMLSPSTSVAAASSLRNIPHKQQSRPQQSQISFAAN 1321
Query: 1248 SKPMASGSSMQQVQGGTNNQAPSPPMLVGSPSTSSGLQKRGWEPK 1382
SKPM SGS MQQVQGGTN+QAPSPPMLVGSPSTSS + P+
Sbjct: 1322 SKPMTSGSPMQQVQGGTNHQAPSPPMLVGSPSTSSVSKNASGSPR 1366
Score = 284 bits (725), Expect = 2e-076
Identities = 156/205 (76%), Positives = 170/205 (82%), Gaps = 16/205 (7%)
Frame = +1
Query: 1354 VSRSAGGSPRTTASASSAVNKTVQASSTTHSSSQPPKNQQSSSAASPAGGRNNGPSVLGN 1533
VS++A GSPRTTASASSA NK QAS+TTHS+SQP KN Q +SAAS AGGRNNGPSVLGN
Sbjct: 1357 VSKNASGSPRTTASASSAANKGGQASTTTHSASQPSKNLQPASAASSAGGRNNGPSVLGN 1416
Query: 1534 PTTSSGSKSQQQQQQLPKHGLQQQSQLFFSNPYMQSQHQHQQQQITV-PPGGYYIQRQQQ 1710
PTTSSGSKS QQQQQLPKHGLQ Q+QLFFSNPYMQ+QHQHQQQQIT+ P GGYYIQR QQ
Sbjct: 1417 PTTSSGSKS-QQQQQLPKHGLQPQAQLFFSNPYMQAQHQHQQQQITISPSGGYYIQRHQQ 1475
Query: 1711 QPGSSAAASTAVCHPVSLSACTIGAVTTTSDPAKAMAAAAAASNMK--GGVGKTQQHQLV 1884
Q GS+ A PV+ GAVT TSDPAKA+AAA+AA+NMK GG+GKTQQHQL
Sbjct: 1476 QSGSAPAV------PVT------GAVTATSDPAKAIAAASAANNMKGGGGMGKTQQHQLG 1523
Query: 1885 PPGFPYVHAVPSAVQVKPVDQKQQA 1959
PPGF VHAV SAVQVKPVDQKQQA
Sbjct: 1524 PPGFTNVHAVSSAVQVKPVDQKQQA 1548
>TAIR9_protein||AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF19 (AUXIN
RESPONSE FACTOR 19); DNA binding / transcription factor |
chr1:6628395-6632779 REVERSE
Length = 1087
Score = 53 bits (126), Expect = 6e-007
Identities = 52/174 (29%), Positives = 72/174 (41%), Gaps = 15/174 (8%)
Frame = +3
Query: 729 NHGSTQPQSSSSVLTSHQQQQLQHLQQQHQQQQ-QQQQHMQRSQLQQPYTTMYLQKQQRY 905
NH S Q Q+ +++ S QQQQ Q Q QHQQQQ QQQQ +Q SQ Q +Y
Sbjct: 479 NHISQQMQAQPAMVKSQQQQQQQQQQHQHQQQQLQQQQQLQMSQQQVQQQGIY-----NN 533
Query: 906 ATSVAASAAKTKGPVAASNGSGFPDHNISVSPAGSTKFTN------ANSGFPQNLVQSSS 1067
T A+ + P + S S+ P G+ K T+ N G Q +
Sbjct: 534 GTIAVANQVSCQSPNQPTGFSQSQLQQQSMLPTGA-KMTHQNINSMGNKGLSQMTSFAQE 592
Query: 1068 TQAQSPQWKNNSPRASNTSQAQSPSILSPSSSAAAASSVRNVSHKQQSRPQQSQ 1229
Q Q +NS + Q QS L + + + +Q S+P SQ
Sbjct: 593 MQFQQQLEMHNSSQLLRNQQEQSS--LHSLQQNLSQNPQQLQMQQQSSKPSPSQ 644
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,934,814,895
Number of Sequences: 33410
Number of Extensions: 20934814895
Number of Successful Extensions: 664441597
Number of sequences better than 0.0: 0
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