BLASTX 7.6.2
Query= UN42654 /QuerySize=674
(673 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G55680.1 | Symbols: | WD-40 repeat family pro... 211 4e-055
TAIR9_protein||AT3G13340.1 | Symbols: | WD-40 repeat family pro... 202 2e-052
TAIR9_protein||AT5G56190.1 | Symbols: | WD-40 repeat family pro... 157 8e-039
TAIR9_protein||AT5G56190.2 | Symbols: | WD-40 repeat family pro... 157 8e-039
TAIR9_protein||AT1G78070.1 | Symbols: | FUNCTIONS IN: molecular... 111 4e-025
TAIR9_protein||AT1G36070.1 | Symbols: | WD-40 repeat family pro... 96 1e-020
>TAIR9_protein||AT1G55680.1 | Symbols: | WD-40 repeat family protein |
chr1:20804988-20807294 REVERSE
Length = 446
Score = 211 bits (536), Expect = 4e-055
Identities = 107/141 (75%), Positives = 117/141 (82%), Gaps = 6/141 (4%)
Frame = +3
Query: 84 MSNIQPEDPAPYMNHVGDQMQEAHNGLEDDFHGD---AWDSDVDEFDYSNNKIGDTSAAQ 254
MSN Q +D A YM V D+M E + L++DF GD A DSDVDEFDYSNNKI DTSA Q
Sbjct: 1 MSNYQGDD-AEYMEDVDDEMDE--DDLDEDFRGDDMAASDSDVDEFDYSNNKIADTSADQ 57
Query: 255 ARKGKDIQGIPWGRLIITRDQYRQTRLEQYRNYENVPTSGDSSAKDCMVTQKGALFYDFW 434
ARKGKDIQGIPW RL ITR+ YRQTRLEQY+NYENVP SG+SS KDCM TQKGALFYDFW
Sbjct: 58 ARKGKDIQGIPWDRLSITRETYRQTRLEQYKNYENVPNSGESSGKDCMATQKGALFYDFW 117
Query: 435 RNSRSIKSSIIHFQLRNLVWA 497
RN+RSIKSSI+HFQLRNLVWA
Sbjct: 118 RNTRSIKSSILHFQLRNLVWA 138
Score = 83 bits (204), Expect = 1e-016
Identities = 40/44 (90%), Positives = 42/44 (95%)
Frame = +2
Query: 542 VNHYSTLTSRKREVLNVQGHVSPSEKHPGSLLEGFTKTQVSTLA 673
V+HYSTLTS K +VLNVQGHVSPSEKHPGSLLEGFTKTQVSTLA
Sbjct: 152 VSHYSTLTSGKHDVLNVQGHVSPSEKHPGSLLEGFTKTQVSTLA 195
>TAIR9_protein||AT3G13340.1 | Symbols: | WD-40 repeat family protein |
chr3:4332370-4334603 FORWARD
Length = 448
Score = 202 bits (512), Expect = 2e-052
Identities = 97/141 (68%), Positives = 117/141 (82%), Gaps = 4/141 (2%)
Frame = +3
Query: 84 MSNIQPEDPAPYMNHVGDQMQEAHNGLEDDFHGD---AWDSDVDEFDYSNNKIGDTSAAQ 254
MSN + +D A YM V D+M++ + ++++F GD A DSDV+EFDYSNNK+ DT+A Q
Sbjct: 1 MSNYRGDD-AEYMEDVDDEMEDVEDDMDEEFRGDDLGASDSDVEEFDYSNNKVADTTAEQ 59
Query: 255 ARKGKDIQGIPWGRLIITRDQYRQTRLEQYRNYENVPTSGDSSAKDCMVTQKGALFYDFW 434
ARKGKDIQGIPW RL I+R++YRQTRLEQY+NYENVP SG+SS K C VTQKG LFYDFW
Sbjct: 60 ARKGKDIQGIPWDRLNISREKYRQTRLEQYKNYENVPNSGESSEKVCKVTQKGGLFYDFW 119
Query: 435 RNSRSIKSSIIHFQLRNLVWA 497
RNSRSIKS+I+HFQLRNLVWA
Sbjct: 120 RNSRSIKSTILHFQLRNLVWA 140
Score = 80 bits (195), Expect = 1e-015
Identities = 43/68 (63%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = +2
Query: 470 FPVEKFGMGTSKQMSTLCQTFW*TVNHYSTLTSRKREVLNVQGHVSPSEKHPGSLLEGFT 649
F + TSK L F V HYS+LTS K EVLNV+GHV+PSEKHPGSLLEGFT
Sbjct: 132 FQLRNLVWATSKHDVYLMSNF--LVTHYSSLTSGKHEVLNVRGHVAPSEKHPGSLLEGFT 189
Query: 650 KTQVSTLA 673
+TQVSTLA
Sbjct: 190 QTQVSTLA 197
>TAIR9_protein||AT5G56190.1 | Symbols: | WD-40 repeat family protein |
chr5:22742563-22744909 FORWARD
Length = 442
Score = 157 bits (395), Expect = 8e-039
Identities = 76/121 (62%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Frame = +3
Query: 135 DQMQEAHNGLEDDFHGDAWDSDVDEFDYSNNKIGDTSAAQARKGKDIQGIPWGRLIITRD 314
D +++ N D DA DS+V++FD NK DTSAAQAR GKDIQGIPW L +TR
Sbjct: 15 DDLEDDMNAAFDGRDIDASDSEVEDFD-QLNKAADTSAAQARNGKDIQGIPWDSLTLTRK 73
Query: 315 QYRQTRLEQYRNYENVPTSGDSSAKDCMVTQKGALFYDFWRNSRSIKSSIIHFQLRNLVW 494
YR+TRLEQY+NYEN+P SGD SAK CM T+KG+ FY+F RNSRS++S+I+HFQLRNLVW
Sbjct: 74 DYRKTRLEQYKNYENIPNSGDESAKKCMNTEKGSSFYEFRRNSRSVRSTILHFQLRNLVW 133
Query: 495 A 497
A
Sbjct: 134 A 134
Score = 70 bits (171), Expect = 8e-013
Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = +2
Query: 470 FPVEKFGMGTSKQMSTLCQTFW*TVNHYSTLTSRKREVLNVQGHVSPSEKHPGSLLEGFT 649
F + TSK L + +++H+S+LT + E+LNV+GHV+PSEKHP SLLEGFT
Sbjct: 126 FQLRNLVWATSKHDVYLLSNY--SISHWSSLTGCRSEILNVKGHVAPSEKHPESLLEGFT 183
Query: 650 KTQVSTLA 673
+TQVSTLA
Sbjct: 184 ETQVSTLA 191
>TAIR9_protein||AT5G56190.2 | Symbols: | WD-40 repeat family protein |
chr5:22742654-22744909 FORWARD
Length = 448
Score = 157 bits (395), Expect = 8e-039
Identities = 76/121 (62%), Positives = 93/121 (76%), Gaps = 1/121 (0%)
Frame = +3
Query: 135 DQMQEAHNGLEDDFHGDAWDSDVDEFDYSNNKIGDTSAAQARKGKDIQGIPWGRLIITRD 314
D +++ N D DA DS+V++FD NK DTSAAQAR GKDIQGIPW L +TR
Sbjct: 21 DDLEDDMNAAFDGRDIDASDSEVEDFD-QLNKAADTSAAQARNGKDIQGIPWDSLTLTRK 79
Query: 315 QYRQTRLEQYRNYENVPTSGDSSAKDCMVTQKGALFYDFWRNSRSIKSSIIHFQLRNLVW 494
YR+TRLEQY+NYEN+P SGD SAK CM T+KG+ FY+F RNSRS++S+I+HFQLRNLVW
Sbjct: 80 DYRKTRLEQYKNYENIPNSGDESAKKCMNTEKGSSFYEFRRNSRSVRSTILHFQLRNLVW 139
Query: 495 A 497
A
Sbjct: 140 A 140
Score = 70 bits (171), Expect = 8e-013
Identities = 36/68 (52%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Frame = +2
Query: 470 FPVEKFGMGTSKQMSTLCQTFW*TVNHYSTLTSRKREVLNVQGHVSPSEKHPGSLLEGFT 649
F + TSK L + +++H+S+LT + E+LNV+GHV+PSEKHP SLLEGFT
Sbjct: 132 FQLRNLVWATSKHDVYLLSNY--SISHWSSLTGCRSEILNVKGHVAPSEKHPESLLEGFT 189
Query: 650 KTQVSTLA 673
+TQVSTLA
Sbjct: 190 ETQVSTLA 197
>TAIR9_protein||AT1G78070.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING
ubiquitin ligase complex; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986),
WD40/YVTN repeat-like (InterPro:IPR015943), WD40 repeat
(InterPro:IPR001680); BEST Arabidopsis thaliana protein match is: WD-40
repeat family protein (TAIR:AT1G36070.1); Has 110 Blast hits to 110
proteins in 30 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
28; Plants - 80; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink). | chr1:29355219-29358368 FORWARD
Length = 450
Score = 111 bits (277), Expect = 4e-025
Identities = 57/106 (53%), Positives = 74/106 (69%), Gaps = 2/106 (1%)
Frame = +3
Query: 183 DAWDSDVDEFDYSNNKI-GDTSAAQARKGKDIQGIPWGRLIITRDQYRQTRLEQYRNYEN 359
D DSD D F+ S +K +TSA +AR GKDIQGIPW L TRD+YR+ RL Y+N+E+
Sbjct: 38 DFMDSDFD-FELSESKTNNETSALEARNGKDIQGIPWESLNYTRDRYRENRLLHYKNFES 96
Query: 360 VPTSGDSSAKDCMVTQKGALFYDFWRNSRSIKSSIIHFQLRNLVWA 497
+ S + K+C+ +KG FYDF N+R +KS+I HFQLRNLVWA
Sbjct: 97 LFRSREELDKECLQVEKGKNFYDFQFNTRLVKSTIAHFQLRNLVWA 142
>TAIR9_protein||AT1G36070.1 | Symbols: | WD-40 repeat family protein |
chr1:13467164-13470386 REVERSE
Length = 419
Score = 96 bits (238), Expect = 1e-020
Identities = 51/105 (48%), Positives = 69/105 (65%), Gaps = 3/105 (2%)
Frame = +3
Query: 192 DSDVDEFDYSNNKIGDTSAAQARKGKDIQGIPWGRLIITRDQYRQTRLEQYRNYENV--P 365
DSD ++ + DTSA +AR GKDIQGI W RD++R+TRL+QY N+ N+ P
Sbjct: 7 DSDFEDDCETKKMETDTSAQEARNGKDIQGIQWEGFKYNRDEFRETRLKQYDNFVNILRP 66
Query: 366 TSGDSSAKD-CMVTQKGALFYDFWRNSRSIKSSIIHFQLRNLVWA 497
+S + K+ V +KG FYDF N+R + S+I+HFQLRNLVWA
Sbjct: 67 SSREKLDKEHGQVVEKGKNFYDFQFNTRLVTSTIVHFQLRNLVWA 111
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,934,814,895
Number of Sequences: 33410
Number of Extensions: 20934814895
Number of Successful Extensions: 664441597
Number of sequences better than 0.0: 0
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