BLASTX 7.6.2
Query= UN42661 /QuerySize=840
(839 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-l... 409 1e-114
TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription... 134 1e-031
TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a... 123 1e-028
TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a... 123 1e-028
TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-L... 105 5e-023
TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIK... 104 1e-022
>TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13);
transcription factor | chr4:9661218-9662807 REVERSE
Length = 530
Score = 409 bits (1050), Expect = 1e-114
Identities = 205/255 (80%), Positives = 222/255 (87%), Gaps = 6/255 (2%)
Frame = +1
Query: 88 MQTSQKHHTAAGLHMLYPQPHCSPQFQMIDNNNNNNGSSNESFFTLES---SGPLPSYDS 258
MQTSQKHH+AAGLHMLYPQ +CSPQFQ DN ++ S E+FFTLES SG LPSYDS
Sbjct: 1 MQTSQKHHSAAGLHMLYPQVYCSPQFQAKDNKGFSDIPSKENFFTLESSTASGSLPSYDS 60
Query: 259 PSVSITSARTPFSP---HSCISDPHPSPENVYGSPLSAASSYVYDEAGIKSKIRELEDSL 429
PSVSITS R+PFSP SCISD H SP+NVYGSPLS SS YDEAG+KSKIRELE SL
Sbjct: 61 PSVSITSGRSPFSPQGSQSCISDLHHSPDNVYGSPLSGVSSLAYDEAGVKSKIRELEVSL 120
Query: 430 LSGDTKVEEYSGFSPAAGKSWNWDELLALTPQLDLKEVLMEGARAVSDGDFATACGFIDV 609
LSGDTKVEE+SGFSPAAGKSWNWDELLALTPQLDLKEVL+E ARAV+DGDFATA GF+DV
Sbjct: 121 LSGDTKVEEFSGFSPAAGKSWNWDELLALTPQLDLKEVLVEAARAVADGDFATAYGFLDV 180
Query: 610 LEQMVSVSGTPVQRLGAYMAEGLRARLEGSGGNIYRALKCNEPTGRELMSYMGVLYEICP 789
LEQMVSVSG+P+QRLG YMAEGLRARLEGSG NIY++LKCNEPTGRELMSYM VLYEICP
Sbjct: 181 LEQMVSVSGSPIQRLGTYMAEGLRARLEGSGSNIYKSLKCNEPTGRELMSYMSVLYEICP 240
Query: 790 YWKFAYTASNAAILE 834
YWKFAYT +N ILE
Sbjct: 241 YWKFAYTTANVEILE 255
>TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor |
chr1:18737398-18739547 REVERSE
Length = 598
Score = 134 bits (335), Expect = 1e-031
Identities = 77/172 (44%), Positives = 103/172 (59%), Gaps = 3/172 (1%)
Frame = +1
Query: 328 SPENVYGSPLSAASSYVYDEAGIKSKIRELEDSLLSG--DTKVEEYSGFSPAAG-KSWNW 498
SPE SPLS +S+ +E + +++LE +++ D GF G S
Sbjct: 156 SPEENNNSPLSGSSATNTNETELSLMLKDLETAMMEPDVDNSYNNQGGFGQQHGVVSSAM 215
Query: 499 DELLALTPQLDLKEVLMEGARAVSDGDFATACGFIDVLEQMVSVSGTPVQRLGAYMAEGL 678
+ + + DLK VL E A+AV + D I L+QMVSVSG PVQRLGAYM EGL
Sbjct: 216 YRSMEMISRGDLKGVLYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGL 275
Query: 679 RARLEGSGGNIYRALKCNEPTGRELMSYMGVLYEICPYWKFAYTASNAAILE 834
ARL SG +IY+AL+C +PTG EL++YM +LYE CPY+KF Y ++N AI E
Sbjct: 276 VARLASSGSSIYKALRCKDPTGPELLTYMHILYEACPYFKFGYESANGAIAE 327
>TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 123 bits (308), Expect = 1e-028
Identities = 73/161 (45%), Positives = 98/161 (60%), Gaps = 6/161 (3%)
Frame = +1
Query: 370 SYVYDEAG-IKSKIRELEDSLL---SGDTKVEEYSGFSPAAGKSWN-WDELLALTPQLDL 534
S V DE K KIRE+E ++ S D V+ F A + N W L + DL
Sbjct: 60 SCVTDELNDFKHKIREIETVMMGPDSLDLLVDCTDSFDSTASQEINGWRSTLEAISRRDL 119
Query: 535 KEVLMEGARAVSDGDFATACGFIDVLEQMVSVSGTPVQRLGAYMAEGLRARLEGSGGNIY 714
+ L+ A+A+S+ D A ++ L QMVSVSG P+QRLGAY+ EGL A+L SG +IY
Sbjct: 120 RADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIY 179
Query: 715 RAL-KCNEPTGRELMSYMGVLYEICPYWKFAYTASNAAILE 834
+AL +C EP EL+SYM +LYE+CPY+KF Y ++N AI E
Sbjct: 180 KALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAE 220
>TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 123 bits (308), Expect = 1e-028
Identities = 73/161 (45%), Positives = 98/161 (60%), Gaps = 6/161 (3%)
Frame = +1
Query: 370 SYVYDEAG-IKSKIRELEDSLL---SGDTKVEEYSGFSPAAGKSWN-WDELLALTPQLDL 534
S V DE K KIRE+E ++ S D V+ F A + N W L + DL
Sbjct: 60 SCVTDELNDFKHKIREIETVMMGPDSLDLLVDCTDSFDSTASQEINGWRSTLEAISRRDL 119
Query: 535 KEVLMEGARAVSDGDFATACGFIDVLEQMVSVSGTPVQRLGAYMAEGLRARLEGSGGNIY 714
+ L+ A+A+S+ D A ++ L QMVSVSG P+QRLGAY+ EGL A+L SG +IY
Sbjct: 120 RADLVSCAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIY 179
Query: 715 RAL-KCNEPTGRELMSYMGVLYEICPYWKFAYTASNAAILE 834
+AL +C EP EL+SYM +LYE+CPY+KF Y ++N AI E
Sbjct: 180 KALNRCPEPASTELLSYMHILYEVCPYFKFGYMSANGAIAE 220
>TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21);
transcription factor | chr2:1720575-1721816 REVERSE
Length = 414
Score = 105 bits (260), Expect = 5e-023
Identities = 53/102 (51%), Positives = 71/102 (69%)
Frame = +1
Query: 529 DLKEVLMEGARAVSDGDFATACGFIDVLEQMVSVSGTPVQRLGAYMAEGLRARLEGSGGN 708
DLK VL+ A+AVS+ + A + L MVS+SG P+QRLGAYM EGL ARL SG +
Sbjct: 49 DLKLVLVACAKAVSENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSS 108
Query: 709 IYRALKCNEPTGRELMSYMGVLYEICPYWKFAYTASNAAILE 834
IY++L+ EP E +SY+ VL+E+CPY+KF Y ++N AI E
Sbjct: 109 IYKSLQSREPESYEFLSYVYVLHEVCPYFKFGYMSANGAIAE 150
>TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1);
transcription factor | chr1:7509721-7511502 FORWARD
Length = 594
Score = 104 bits (257), Expect = 1e-022
Identities = 50/100 (50%), Positives = 68/100 (68%)
Frame = +1
Query: 535 KEVLMEGARAVSDGDFATACGFIDVLEQMVSVSGTPVQRLGAYMAEGLRARLEGSGGNIY 714
K++L+ ARA+S+G A ++ L Q+VS+ G P QR+ AYM EGL AR+ SG IY
Sbjct: 223 KQILISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIY 282
Query: 715 RALKCNEPTGRELMSYMGVLYEICPYWKFAYTASNAAILE 834
RALKC EP E ++ M VL+E+CP +KF + A+N AILE
Sbjct: 283 RALKCKEPPSDERLAAMQVLFEVCPCFKFGFLAANGAILE 322
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,934,814,895
Number of Sequences: 33410
Number of Extensions: 20934814895
Number of Successful Extensions: 664441597
Number of sequences better than 0.0: 0
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