BLASTX 7.6.2
Query= UN42711 /QuerySize=853
(852 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G23900.1 | Symbols: | 60S ribosomal protein L... 364 7e-101
TAIR9_protein||AT3G49010.1 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC... 356 2e-098
TAIR9_protein||AT3G49010.2 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC... 356 2e-098
TAIR9_protein||AT3G49010.3 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC... 356 2e-098
TAIR9_protein||AT3G49010.4 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC... 350 1e-096
TAIR9_protein||AT3G48960.1 | Symbols: | 60S ribosomal protein L... 320 1e-087
TAIR9_protein||AT3G49010.5 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC... 149 3e-036
>TAIR9_protein||AT5G23900.1 | Symbols: | 60S ribosomal protein L13 (RPL13D) |
chr5:8064176-8065081 REVERSE
Length = 207
Score = 364 bits (932), Expect = 7e-101
Identities = 181/207 (87%), Positives = 189/207 (91%)
Frame = +1
Query: 79 MKHNNEIQGSHFRKHWQNNVKTWFNQPARKTRRRVARQEKAVKIFPRPTSGALRPVVHAR 258
MKHNN I SHFRKHWQN VKTWFNQPARKTRRRVARQ+KAVKIFPRPTSG LRPVVH +
Sbjct: 1 MKHNNVIPSSHFRKHWQNYVKTWFNQPARKTRRRVARQKKAVKIFPRPTSGPLRPVVHGQ 60
Query: 259 TIKYNMKVRAGKGFTLEELKAAGIAKKLAPTIGISIDHRRKNRSLEGLQSNVQRLKTYKA 438
T+KYNMKVRAGKGFTLEELK AGI KKLAPTIGIS+DHRRKNRSLEGLQSNVQRLKTYKA
Sbjct: 61 TLKYNMKVRAGKGFTLEELKVAGIPKKLAPTIGISVDHRRKNRSLEGLQSNVQRLKTYKA 120
Query: 439 KLVVFPRRSRVVKAGDSTPEELANATQVQGGYMPIAREKVAMELVKVTADMKSFKAYDKI 618
KLVVFPRRSR VKAGDSTPEELANATQVQG YMPIA K AMELVK+TAD+K+FKAYDKI
Sbjct: 121 KLVVFPRRSRQVKAGDSTPEELANATQVQGDYMPIASVKAAMELVKLTADLKAFKAYDKI 180
Query: 619 RLERTNKRHAGVRANRATDAEKEEKK* 699
RLERTN RHAG RA RA +AEKEEKK*
Sbjct: 181 RLERTNARHAGARAKRAAEAEKEEKK* 207
>TAIR9_protein||AT3G49010.1 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC1 (ARABIDOPSIS
THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome
| chr3:18166971-18168047 REVERSE
Length = 207
Score = 356 bits (911), Expect = 2e-098
Identities = 172/207 (83%), Positives = 188/207 (90%)
Frame = +1
Query: 79 MKHNNEIQGSHFRKHWQNNVKTWFNQPARKTRRRVARQEKAVKIFPRPTSGALRPVVHAR 258
MKHNN I HF+KHWQN VKTWFNQPARKTRRR+ARQ+KAVKIFPRPTSG LRPVVH +
Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60
Query: 259 TIKYNMKVRAGKGFTLEELKAAGIAKKLAPTIGISIDHRRKNRSLEGLQSNVQRLKTYKA 438
T+KYNMKVR GKGFTLEELKAAGI KKLAPTIGI++DHRRKNRSLEGLQ+NVQRLKTYK
Sbjct: 61 TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120
Query: 439 KLVVFPRRSRVVKAGDSTPEELANATQVQGGYMPIAREKVAMELVKVTADMKSFKAYDKI 618
KLV+FPRR+R VKAGDSTPEELANATQVQG Y+PI REK MELVK+T++MKSFKA+DKI
Sbjct: 121 KLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180
Query: 619 RLERTNKRHAGVRANRATDAEKEEKK* 699
RLERTNKRHAG RA RA +AEKEEKK*
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK* 207
>TAIR9_protein||AT3G49010.2 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC1 (ARABIDOPSIS
THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome
| chr3:18166971-18168047 REVERSE
Length = 207
Score = 356 bits (911), Expect = 2e-098
Identities = 172/207 (83%), Positives = 188/207 (90%)
Frame = +1
Query: 79 MKHNNEIQGSHFRKHWQNNVKTWFNQPARKTRRRVARQEKAVKIFPRPTSGALRPVVHAR 258
MKHNN I HF+KHWQN VKTWFNQPARKTRRR+ARQ+KAVKIFPRPTSG LRPVVH +
Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60
Query: 259 TIKYNMKVRAGKGFTLEELKAAGIAKKLAPTIGISIDHRRKNRSLEGLQSNVQRLKTYKA 438
T+KYNMKVR GKGFTLEELKAAGI KKLAPTIGI++DHRRKNRSLEGLQ+NVQRLKTYK
Sbjct: 61 TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120
Query: 439 KLVVFPRRSRVVKAGDSTPEELANATQVQGGYMPIAREKVAMELVKVTADMKSFKAYDKI 618
KLV+FPRR+R VKAGDSTPEELANATQVQG Y+PI REK MELVK+T++MKSFKA+DKI
Sbjct: 121 KLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180
Query: 619 RLERTNKRHAGVRANRATDAEKEEKK* 699
RLERTNKRHAG RA RA +AEKEEKK*
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK* 207
>TAIR9_protein||AT3G49010.3 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC1 (ARABIDOPSIS
THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome
| chr3:18166971-18168047 REVERSE
Length = 207
Score = 356 bits (911), Expect = 2e-098
Identities = 172/207 (83%), Positives = 188/207 (90%)
Frame = +1
Query: 79 MKHNNEIQGSHFRKHWQNNVKTWFNQPARKTRRRVARQEKAVKIFPRPTSGALRPVVHAR 258
MKHNN I HF+KHWQN VKTWFNQPARKTRRR+ARQ+KAVKIFPRPTSG LRPVVH +
Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60
Query: 259 TIKYNMKVRAGKGFTLEELKAAGIAKKLAPTIGISIDHRRKNRSLEGLQSNVQRLKTYKA 438
T+KYNMKVR GKGFTLEELKAAGI KKLAPTIGI++DHRRKNRSLEGLQ+NVQRLKTYK
Sbjct: 61 TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120
Query: 439 KLVVFPRRSRVVKAGDSTPEELANATQVQGGYMPIAREKVAMELVKVTADMKSFKAYDKI 618
KLV+FPRR+R VKAGDSTPEELANATQVQG Y+PI REK MELVK+T++MKSFKA+DKI
Sbjct: 121 KLVIFPRRARKVKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 180
Query: 619 RLERTNKRHAGVRANRATDAEKEEKK* 699
RLERTNKRHAG RA RA +AEKEEKK*
Sbjct: 181 RLERTNKRHAGARAKRAAEAEKEEKK* 207
>TAIR9_protein||AT3G49010.4 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC1 (ARABIDOPSIS
THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome
| chr3:18166971-18168047 REVERSE
Length = 205
Score = 350 bits (896), Expect = 1e-096
Identities = 171/207 (82%), Positives = 187/207 (90%), Gaps = 2/207 (0%)
Frame = +1
Query: 79 MKHNNEIQGSHFRKHWQNNVKTWFNQPARKTRRRVARQEKAVKIFPRPTSGALRPVVHAR 258
MKHNN I HF+KHWQN VKTWFNQPARKTRRR+ARQ+KAVKIFPRPTSG LRPVVH +
Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60
Query: 259 TIKYNMKVRAGKGFTLEELKAAGIAKKLAPTIGISIDHRRKNRSLEGLQSNVQRLKTYKA 438
T+KYNMKVR GKGFTLEELKAAGI KKLAPTIGI++DHRRKNRSLEGLQ+NVQRLKTYK
Sbjct: 61 TLKYNMKVRTGKGFTLEELKAAGIPKKLAPTIGIAVDHRRKNRSLEGLQTNVQRLKTYKT 120
Query: 439 KLVVFPRRSRVVKAGDSTPEELANATQVQGGYMPIAREKVAMELVKVTADMKSFKAYDKI 618
KLV+FPRR+R KAGDSTPEELANATQVQG Y+PI REK MELVK+T++MKSFKA+DKI
Sbjct: 121 KLVIFPRRAR--KAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKI 178
Query: 619 RLERTNKRHAGVRANRATDAEKEEKK* 699
RLERTNKRHAG RA RA +AEKEEKK*
Sbjct: 179 RLERTNKRHAGARAKRAAEAEKEEKK* 205
>TAIR9_protein||AT3G48960.1 | Symbols: | 60S ribosomal protein L13 (RPL13C) |
chr3:18150444-18151412 REVERSE
Length = 207
Score = 320 bits (818), Expect = 1e-087
Identities = 159/207 (76%), Positives = 175/207 (84%)
Frame = +1
Query: 79 MKHNNEIQGSHFRKHWQNNVKTWFNQPARKTRRRVARQEKAVKIFPRPTSGALRPVVHAR 258
MKHNN I HF+K W+N VKT FNQPA KTRRR+ARQ KAVKIFPRPT+G +RPVVHA+
Sbjct: 1 MKHNNVIPNGHFKKKWENYVKTSFNQPAMKTRRRIARQNKAVKIFPRPTAGPIRPVVHAQ 60
Query: 259 TIKYNMKVRAGKGFTLEELKAAGIAKKLAPTIGISIDHRRKNRSLEGLQSNVQRLKTYKA 438
T+ YNMKVRAGKGFTLEELKAAGI KKLAPTIGIS+DH RKNRSLEG Q+NVQRLKTYKA
Sbjct: 61 TLTYNMKVRAGKGFTLEELKAAGIPKKLAPTIGISVDHHRKNRSLEGFQTNVQRLKTYKA 120
Query: 439 KLVVFPRRSRVVKAGDSTPEELANATQVQGGYMPIAREKVAMELVKVTADMKSFKAYDKI 618
KLV+FPR +R VK GDS +ELANATQVQ +MPI RE MELVK+T+DMK F AYDKI
Sbjct: 121 KLVIFPRCARTVKVGDSAQQELANATQVQVDHMPIVREMPTMELVKLTSDMKLFNAYDKI 180
Query: 619 RLERTNKRHAGVRANRATDAEKEEKK* 699
RLE NKRHAGVRA RA +AEKEEKK*
Sbjct: 181 RLEGINKRHAGVRAKRAAEAEKEEKK* 207
>TAIR9_protein||AT3G49010.5 | Symbols: ATBBC1, BBC1, RSU2 | ATBBC1 (ARABIDOPSIS
THALIANA BREAST BASIC CONSERVED 1); structural constituent of ribosome
| chr3:18166971-18168047 REVERSE
Length = 154
Score = 149 bits (375), Expect = 3e-036
Identities = 77/124 (62%), Positives = 92/124 (74%), Gaps = 5/124 (4%)
Frame = +1
Query: 79 MKHNNEIQGSHFRKHWQNNVKTWFNQPARKTRRRVARQEKAVKIFPRPTSGALRPVVHAR 258
MKHNN I HF+KHWQN VKTWFNQPARKTRRR+ARQ+KAVKIFPRPTSG LRPVVH +
Sbjct: 1 MKHNNVIPNGHFKKHWQNYVKTWFNQPARKTRRRIARQKKAVKIFPRPTSGPLRPVVHGQ 60
Query: 259 TIKYNMKVRAGKGFTLEELKAA-GIAKKLAPTIGISIDHR---RKNRSLEGLQSNVQRLK 426
T+KYNMKVR GKGFTLEELKA ++LA + D+ R+ ++E L +K
Sbjct: 61 TLKYNMKVRTGKGFTLEELKAGDSTPEELANATQVQGDYLPIVREKPTME-LVKLTSEMK 119
Query: 427 TYKA 438
++KA
Sbjct: 120 SFKA 123
Score = 126 bits (315), Expect = 2e-029
Identities = 61/76 (80%), Positives = 68/76 (89%)
Frame = +1
Query: 472 VKAGDSTPEELANATQVQGGYMPIAREKVAMELVKVTADMKSFKAYDKIRLERTNKRHAG 651
+KAGDSTPEELANATQVQG Y+PI REK MELVK+T++MKSFKA+DKIRLERTNKRHAG
Sbjct: 79 LKAGDSTPEELANATQVQGDYLPIVREKPTMELVKLTSEMKSFKAFDKIRLERTNKRHAG 138
Query: 652 VRANRATDAEKEEKK* 699
RA RA +AEKEEKK*
Sbjct: 139 ARAKRAAEAEKEEKK* 154
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,979,486,417
Number of Sequences: 33410
Number of Extensions: 20979486417
Number of Successful Extensions: 664515259
Number of sequences better than 0.0: 0
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