BLASTX 7.6.2
Query= UN42932 /QuerySize=1151
(1150 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G01150.1 | Symbols: | unknown protein | chr4:... 159 3e-039
TAIR9_protein||AT4G38100.1 | Symbols: | unknown protein | chr4:... 87 2e-017
TAIR9_protein||AT4G01150.2 | Symbols: | unknown protein | chr4:... 81 1e-015
TAIR9_protein||AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P ... 75 9e-014
TAIR9_protein||AT2G46820.2 | Symbols: PTAC8, TMP14, PSAP, PSI-P ... 75 9e-014
TAIR9_protein||AT1G52220.2 | Symbols: | FUNCTIONS IN: molecular... 66 3e-011
TAIR9_protein||AT1G52220.1 | Symbols: | FUNCTIONS IN: molecular... 65 9e-011
>TAIR9_protein||AT4G01150.1 | Symbols: | unknown protein | chr4:493692-494668
FORWARD
Length = 165
Score = 159 bits (402), Expect = 3e-039
Identities = 77/83 (92%), Positives = 82/83 (98%)
Frame = +3
Query: 780 KWDGLENKATVVIYGGGAIVAVWLSSILVGAINSVPLLPKVMELVGLGYTGWFVYRYLLF 959
KWDGLENK+TV+IYGGGAIVAVWLSSI+VGAINSVPLLPKVMELVGLGYTGWFVYRYLLF
Sbjct: 83 KWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLLPKVMELVGLGYTGWFVYRYLLF 142
Query: 960 KSSRKELAEDIDSLKKKIAGTE* 1028
KSSRKELAEDI+SLKKKIAG+E*
Sbjct: 143 KSSRKELAEDIESLKKKIAGSE* 165
Score = 81 bits (199), Expect = 1e-015
Identities = 43/54 (79%), Positives = 48/54 (88%), Gaps = 3/54 (5%)
Frame = +3
Query: 42 MAMTVAASSSVAVMIPRVPAVSARLSAVPYLPPLPPRSLGRSSFTVPLKLVSGD 203
MA++VAASSS+AVM+PRVPAVS R SAVPY LPPRS GRSSFTVPLKLVSG+
Sbjct: 1 MAISVAASSSMAVMVPRVPAVSTRCSAVPY---LPPRSFGRSSFTVPLKLVSGN 51
Score = 55 bits (131), Expect = 7e-008
Identities = 28/38 (73%), Positives = 34/38 (89%), Gaps = 2/38 (5%)
Frame = +1
Query: 595 MAGNGLQKVELMKTRASSSDDTSTSIDTNELFTDLKEK 708
++GNGLQKVEL+KTRASS + ++SIDTNEL TDLKEK
Sbjct: 48 VSGNGLQKVELLKTRASSEE--TSSIDTNELITDLKEK 83
>TAIR9_protein||AT4G38100.1 | Symbols: | unknown protein |
chr4:17887033-17888177 REVERSE
Length = 194
Score = 87 bits (214), Expect = 2e-017
Identities = 36/73 (49%), Positives = 58/73 (79%)
Frame = +3
Query: 807 TVVIYGGGAIVAVWLSSILVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFKSSRKELAE 986
++++YG GAIVA++L+S +V ++ ++PL PK+ME+VGLGYT WF RYLLFK +R+EL
Sbjct: 119 SILLYGSGAIVALYLTSAIVSSLEAIPLFPKLMEVVGLGYTLWFTTRYLLFKRNREELKT 178
Query: 987 DIDSLKKKIAGTE 1025
+ +KK++ G++
Sbjct: 179 KVSEIKKQVLGSD 191
>TAIR9_protein||AT4G01150.2 | Symbols: | unknown protein | chr4:493692-494379
FORWARD
Length = 126
Score = 81 bits (199), Expect = 1e-015
Identities = 43/54 (79%), Positives = 48/54 (88%), Gaps = 3/54 (5%)
Frame = +3
Query: 42 MAMTVAASSSVAVMIPRVPAVSARLSAVPYLPPLPPRSLGRSSFTVPLKLVSGD 203
MA++VAASSS+AVM+PRVPAVS R SAVPY LPPRS GRSSFTVPLKLVSG+
Sbjct: 1 MAISVAASSSMAVMVPRVPAVSTRCSAVPY---LPPRSFGRSSFTVPLKLVSGN 51
Score = 74 bits (180), Expect = 2e-013
Identities = 34/38 (89%), Positives = 38/38 (100%)
Frame = +3
Query: 780 KWDGLENKATVVIYGGGAIVAVWLSSILVGAINSVPLL 893
KWDGLENK+TV+IYGGGAIVAVWLSSI+VGAINSVPL+
Sbjct: 83 KWDGLENKSTVLIYGGGAIVAVWLSSIVVGAINSVPLV 120
Score = 55 bits (131), Expect = 7e-008
Identities = 28/38 (73%), Positives = 34/38 (89%), Gaps = 2/38 (5%)
Frame = +1
Query: 595 MAGNGLQKVELMKTRASSSDDTSTSIDTNELFTDLKEK 708
++GNGLQKVEL+KTRASS + ++SIDTNEL TDLKEK
Sbjct: 48 VSGNGLQKVELLKTRASSEE--TSSIDTNELITDLKEK 83
>TAIR9_protein||AT2G46820.1 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P
(PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870
FORWARD
Length = 175
Score = 75 bits (182), Expect = 9e-014
Identities = 33/82 (40%), Positives = 53/82 (64%)
Frame = +3
Query: 783 WDGLENKATVVIYGGGAIVAVWLSSILVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFK 962
W+ +++K + +VA+W S+ ++ AI+ +PL+P V+ELVG+GYTGWF Y+ L+FK
Sbjct: 94 WEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFK 153
Query: 963 SSRKELAEDIDSLKKKIAGTE* 1028
R+ L E + S K I G+ *
Sbjct: 154 PDREALFEKVKSTYKDILGSS* 175
>TAIR9_protein||AT2G46820.2 | Symbols: PTAC8, TMP14, PSAP, PSI-P | PSI-P
(PHOTOSYSTEM I P SUBUNIT); DNA binding | chr2:19243729-19244870
FORWARD
Length = 175
Score = 75 bits (182), Expect = 9e-014
Identities = 33/82 (40%), Positives = 53/82 (64%)
Frame = +3
Query: 783 WDGLENKATVVIYGGGAIVAVWLSSILVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFK 962
W+ +++K + +VA+W S+ ++ AI+ +PL+P V+ELVG+GYTGWF Y+ L+FK
Sbjct: 94 WEKVDDKYAIGSLAFAGVVALWGSAGMISAIDRLPLVPGVLELVGIGYTGWFTYKNLVFK 153
Query: 963 SSRKELAEDIDSLKKKIAGTE* 1028
R+ L E + S K I G+ *
Sbjct: 154 PDREALFEKVKSTYKDILGSS* 175
>TAIR9_protein||AT1G52220.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species:
Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 156
Score = 66 bits (160), Expect = 3e-011
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +3
Query: 768 SVLVKWDGLENKATVVIYGGGAIVAVWLSSILVGAINSVPLLPKVMELVGLGYTGWFVYR 947
S + WD E++ ++ G IVA+W S L+ AI+ +P++ ELVG+ ++ WF YR
Sbjct: 71 STIQNWDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTYR 130
Query: 948 YLLFKSSRKELAEDIDSLKKKIA 1016
YLLFK R+EL++ + KK +A
Sbjct: 131 YLLFKPDRQELSKIV---KKSVA 150
>TAIR9_protein||AT1G52220.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: PSI-P (PHOTOSYSTEM I P SUBUNIT); DNA binding
(TAIR:AT2G46820.2); Has 203 Blast hits to 203 proteins in 35 species:
Archae - 0; Bacteria - 66; Metazoa - 0; Fungi - 0; Plants - 136;
Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
chr1:19453770-19454605 REVERSE
Length = 157
Score = 65 bits (156), Expect = 9e-011
Identities = 32/78 (41%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
Frame = +3
Query: 783 WDGLENKATVVIYGGGAIVAVWLSSILVGAINSVPLLPKVMELVGLGYTGWFVYRYLLFK 962
WD E++ ++ G IVA+W S L+ AI+ +P++ ELVG+ ++ WF YRYLLFK
Sbjct: 77 WDKSEDRLGLIGLGFAGIVALWASLNLITAIDKLPVISSGFELVGILFSTWFTYRYLLFK 136
Query: 963 SSRKELAEDIDSLKKKIA 1016
R+EL++ + KK +A
Sbjct: 137 PDRQELSKIV---KKSVA 151
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,024,675,335
Number of Sequences: 33410
Number of Extensions: 21024675335
Number of Successful Extensions: 664527818
Number of sequences better than 0.0: 0
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