BLASTX 7.6.2
Query= UN42945 /QuerySize=944
(943 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297835232|ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata... 235 1e-059
gi|15228724|ref|NP_188871.1| DNA-directed RNA polymerase II subu... 233 5e-059
gi|224119828|ref|XP_002331171.1| predicted protein [Populus tric... 209 6e-052
gi|225445170|ref|XP_002284107.1| PREDICTED: hypothetical protein... 205 1e-050
gi|255625665|gb|ACU13177.1| unknown [Glycine max] 191 1e-046
gi|255627545|gb|ACU14117.1| unknown [Glycine max] 190 3e-046
gi|297738790|emb|CBI28035.3| unnamed protein product [Vitis vini... 179 9e-043
gi|168011548|ref|XP_001758465.1| predicted protein [Physcomitrel... 170 4e-040
gi|168003716|ref|XP_001754558.1| predicted protein [Physcomitrel... 164 2e-038
gi|192910670|gb|ACF06443.1| DNA-directed RNA polymerases II 24 k... 161 2e-037
gi|297830274|ref|XP_002883019.1| hypothetical protein ARALYDRAFT... 160 3e-037
gi|302795809|ref|XP_002979667.1| hypothetical protein SELMODRAFT... 157 3e-036
gi|116785870|gb|ABK23892.1| unknown [Picea sitchensis] 154 2e-035
gi|194693176|gb|ACF80672.1| unknown [Zea mays] 152 1e-034
gi|226530454|ref|NP_001141164.1| hypothetical protein LOC1002732... 152 1e-034
>gi|297835232|ref|XP_002885498.1| ATRPABC24.3 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 235 bits (597), Expect = 1e-059
Identities = 116/125 (92%), Positives = 122/125 (97%)
Frame = +2
Query: 116 LTEEEIKRLYRIQKTLMQMLKDRGYFIADSEITMSLSQFVRKYGDNMKREDLVTLKAKRN 295
LTEEEIKRLYRIQKTLMQMLKDRGYFIADSE+TM+ QF+RK+GDNMKREDLVTLK KRN
Sbjct: 2 LTEEEIKRLYRIQKTLMQMLKDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKVKRN 61
Query: 296 DSSDQLYIFFPDEAKVGVKTMKVYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFH 475
D+SDQLYIFFPDEAKVGVKTMK+YTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFH
Sbjct: 62 DNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFH 121
Query: 476 LEVFQ 490
LEVFQ
Sbjct: 122 LEVFQ 126
Score = 158 bits (398), Expect = 2e-036
Identities = 79/79 (100%)
Frame = +1
Query: 598 EAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVV 777
EAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVV
Sbjct: 127 EAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVV 186
Query: 778 KIIRPSETAGRYVTYRYVV 834
KIIRPSETAGRYVTYRYVV
Sbjct: 187 KIIRPSETAGRYVTYRYVV 205
>gi|15228724|ref|NP_188871.1| DNA-directed RNA polymerase II subunit E
[Arabidopsis thaliana]
Length = 205
Score = 233 bits (592), Expect = 5e-059
Identities = 114/125 (91%), Positives = 123/125 (98%)
Frame = +2
Query: 116 LTEEEIKRLYRIQKTLMQMLKDRGYFIADSEITMSLSQFVRKYGDNMKREDLVTLKAKRN 295
LTEEE+KRLYRIQKTLMQML+DRGYFIADSE+TM+ QF+RK+GDNMKREDLVTLKAKRN
Sbjct: 2 LTEEELKRLYRIQKTLMQMLRDRGYFIADSELTMTKQQFIRKHGDNMKREDLVTLKAKRN 61
Query: 296 DSSDQLYIFFPDEAKVGVKTMKVYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFH 475
D+SDQLYIFFPDEAKVGVKTMK+YTNRMKSENV+RAILVVQQNLTPFARTCISEISSKFH
Sbjct: 62 DNSDQLYIFFPDEAKVGVKTMKMYTNRMKSENVFRAILVVQQNLTPFARTCISEISSKFH 121
Query: 476 LEVFQ 490
LEVFQ
Sbjct: 122 LEVFQ 126
Score = 158 bits (398), Expect = 2e-036
Identities = 79/79 (100%)
Frame = +1
Query: 598 EAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVV 777
EAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVV
Sbjct: 127 EAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVV 186
Query: 778 KIIRPSETAGRYVTYRYVV 834
KIIRPSETAGRYVTYRYVV
Sbjct: 187 KIIRPSETAGRYVTYRYVV 205
>gi|224119828|ref|XP_002331171.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 209 bits (531), Expect = 6e-052
Identities = 103/127 (81%), Positives = 114/127 (89%)
Frame = +2
Query: 110 MGLTEEEIKRLYRIQKTLMQMLKDRGYFIADSEITMSLSQFVRKYGDNMKREDLVTLKAK 289
M LTEEEIKRL RI+KT+MQMLKDRGYF+ D EI M+ QF KYG+NMKREDLV K K
Sbjct: 1 MTLTEEEIKRLLRIRKTVMQMLKDRGYFVGDFEIKMTREQFESKYGNNMKREDLVINKTK 60
Query: 290 RNDSSDQLYIFFPDEAKVGVKTMKVYTNRMKSENVYRAILVVQQNLTPFARTCISEISSK 469
RNDSSDQ+Y+FFP+EAKVGVKTMK YTNRMKSENV+RAILVVQQNLTPFARTCI+EIS+K
Sbjct: 61 RNDSSDQIYVFFPEEAKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120
Query: 470 FHLEVFQ 490
FHLEVFQ
Sbjct: 121 FHLEVFQ 127
Score = 151 bits (381), Expect = 1e-034
Identities = 73/79 (92%), Positives = 78/79 (98%)
Frame = +1
Query: 598 EAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVV 777
EAE+LVNIKEHVLVPEHQVL+ EEKKTLLERYTVKETQLPRIQ+TDPIARY+GLKRGQVV
Sbjct: 128 EAELLVNIKEHVLVPEHQVLSNEEKKTLLERYTVKETQLPRIQITDPIARYYGLKRGQVV 187
Query: 778 KIIRPSETAGRYVTYRYVV 834
KIIRPSETAGRYVTYRYV+
Sbjct: 188 KIIRPSETAGRYVTYRYVI 206
>gi|225445170|ref|XP_002284107.1| PREDICTED: hypothetical protein isoform 1
[Vitis vinifera]
Length = 206
Score = 205 bits (519), Expect = 1e-050
Identities = 99/127 (77%), Positives = 113/127 (88%)
Frame = +2
Query: 110 MGLTEEEIKRLYRIQKTLMQMLKDRGYFIADSEITMSLSQFVRKYGDNMKREDLVTLKAK 289
M +EEEI RL+RI+KT+MQMLKDRGYF+ D EI M+ QFV K+G+NMKREDLV KAK
Sbjct: 1 MSASEEEISRLFRIRKTVMQMLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAK 60
Query: 290 RNDSSDQLYIFFPDEAKVGVKTMKVYTNRMKSENVYRAILVVQQNLTPFARTCISEISSK 469
R DSSDQ+Y+FFP+E KVGVKTMK YTNRMKSENV+RAILVVQQNLTPFARTCI+EIS+K
Sbjct: 61 RTDSSDQIYVFFPEEQKVGVKTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTK 120
Query: 470 FHLEVFQ 490
FHLEVFQ
Sbjct: 121 FHLEVFQ 127
Score = 153 bits (386), Expect = 4e-035
Identities = 75/79 (94%), Positives = 79/79 (100%)
Frame = +1
Query: 598 EAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVV 777
EAE+LVNIKEHVLVPEHQVLT+EEKKTLLERYTVKETQLPRIQV+DPIARYFGLKRGQVV
Sbjct: 128 EAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLKRGQVV 187
Query: 778 KIIRPSETAGRYVTYRYVV 834
KIIRPSETAGRY+TYRYVV
Sbjct: 188 KIIRPSETAGRYITYRYVV 206
>gi|255625665|gb|ACU13177.1| unknown [Glycine max]
Length = 206
Score = 191 bits (485), Expect = 1e-046
Identities = 93/127 (73%), Positives = 109/127 (85%)
Frame = +2
Query: 110 MGLTEEEIKRLYRIQKTLMQMLKDRGYFIADSEITMSLSQFVRKYGDNMKREDLVTLKAK 289
M L+EEE+ RLYRI+KT+MQML+DRG+ + D EI MS +F KYG++MKREDLV K+K
Sbjct: 1 MVLSEEEMGRLYRIRKTVMQMLRDRGFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60
Query: 290 RNDSSDQLYIFFPDEAKVGVKTMKVYTNRMKSENVYRAILVVQQNLTPFARTCISEISSK 469
+++S DQ+Y+FFPDE KVGVKTMK YTNRM SENVYRAILV Q NLTPFARTCISEISSK
Sbjct: 61 KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSK 120
Query: 470 FHLEVFQ 490
FHLEVFQ
Sbjct: 121 FHLEVFQ 127
>gi|255627545|gb|ACU14117.1| unknown [Glycine max]
Length = 206
Score = 190 bits (482), Expect = 3e-046
Identities = 93/127 (73%), Positives = 108/127 (85%)
Frame = +2
Query: 110 MGLTEEEIKRLYRIQKTLMQMLKDRGYFIADSEITMSLSQFVRKYGDNMKREDLVTLKAK 289
M L+EEEI RLYRI+KT+MQML+DR + + D EI MS +F KYG++MKREDLV K+K
Sbjct: 1 MVLSEEEIGRLYRIRKTVMQMLRDRNFLVGDFEINMSKHEFKSKYGEHMKREDLVINKSK 60
Query: 290 RNDSSDQLYIFFPDEAKVGVKTMKVYTNRMKSENVYRAILVVQQNLTPFARTCISEISSK 469
+++S DQ+Y+FFPDE KVGVKTMK YTNRM SENVYRAILV Q NLTPFARTCISEISSK
Sbjct: 61 KDNSGDQIYVFFPDEPKVGVKTMKTYTNRMNSENVYRAILVTQTNLTPFARTCISEISSK 120
Query: 470 FHLEVFQ 490
FHLEVFQ
Sbjct: 121 FHLEVFQ 127
>gi|297738790|emb|CBI28035.3| unnamed protein product [Vitis vinifera]
Length = 186
Score = 179 bits (452), Expect = 9e-043
Identities = 86/107 (80%), Positives = 96/107 (89%)
Frame = +2
Query: 170 MLKDRGYFIADSEITMSLSQFVRKYGDNMKREDLVTLKAKRNDSSDQLYIFFPDEAKVGV 349
MLKDRGYF+ D EI M+ QFV K+G+NMKREDLV KAKR DSSDQ+Y+FFP+E KVGV
Sbjct: 1 MLKDRGYFVGDFEINMTKHQFVSKFGENMKREDLVINKAKRTDSSDQIYVFFPEEQKVGV 60
Query: 350 KTMKVYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLEVFQ 490
KTMK YTNRMKSENV+RAILVVQQNLTPFARTCI+EIS+KFHLEVFQ
Sbjct: 61 KTMKTYTNRMKSENVFRAILVVQQNLTPFARTCINEISTKFHLEVFQ 107
Score = 153 bits (386), Expect = 4e-035
Identities = 75/79 (94%), Positives = 79/79 (100%)
Frame = +1
Query: 598 EAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVV 777
EAE+LVNIKEHVLVPEHQVLT+EEKKTLLERYTVKETQLPRIQV+DPIARYFGLKRGQVV
Sbjct: 108 EAELLVNIKEHVLVPEHQVLTSEEKKTLLERYTVKETQLPRIQVSDPIARYFGLKRGQVV 167
Query: 778 KIIRPSETAGRYVTYRYVV 834
KIIRPSETAGRY+TYRYVV
Sbjct: 168 KIIRPSETAGRYITYRYVV 186
>gi|168011548|ref|XP_001758465.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 208
Score = 170 bits (429), Expect = 4e-040
Identities = 78/123 (63%), Positives = 105/123 (85%)
Frame = +2
Query: 122 EEEIKRLYRIQKTLMQMLKDRGYFIADSEITMSLSQFVRKYGDNMKREDLVTLKAKRNDS 301
+E+ RLYRI+KT+M+ML+DR Y +AD E+T+S QF KYGD KREDLV K +R+++
Sbjct: 7 DEQSARLYRIRKTVMEMLRDRDYVVADYELTLSKEQFREKYGDEPKREDLVIQKPRRSNN 66
Query: 302 SDQLYIFFPDEAKVGVKTMKVYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLE 481
++ +++FFP+EAKVGVKT+K Y +RMK+ENV+RAILVVQQNLTPFAR C+SE++SK+HLE
Sbjct: 67 AEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVSEMASKYHLE 126
Query: 482 VFQ 490
VFQ
Sbjct: 127 VFQ 129
>gi|168003716|ref|XP_001754558.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 208
Score = 164 bits (415), Expect = 2e-038
Identities = 75/123 (60%), Positives = 103/123 (83%)
Frame = +2
Query: 122 EEEIKRLYRIQKTLMQMLKDRGYFIADSEITMSLSQFVRKYGDNMKREDLVTLKAKRNDS 301
+E+ RLYRI+KT+M+ML+DR Y +A+ E+ + +F KYGD KREDLV K KR+++
Sbjct: 7 DEQCARLYRIRKTVMEMLRDRDYVVAEFELNSTKEEFREKYGDEPKREDLVIQKPKRSNN 66
Query: 302 SDQLYIFFPDEAKVGVKTMKVYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLE 481
++ +++FFP+EAKVGVKT+K Y +RMK+ENV+RAILVVQQNLTPFAR C+SE+SSK+H+E
Sbjct: 67 AEHIFVFFPEEAKVGVKTIKTYVDRMKTENVHRAILVVQQNLTPFARQCVSEMSSKYHVE 126
Query: 482 VFQ 490
VFQ
Sbjct: 127 VFQ 129
>gi|192910670|gb|ACF06443.1| DNA-directed RNA polymerases II 24 kDa polypeptide
[Elaeis guineensis]
Length = 204
Score = 161 bits (405), Expect = 2e-037
Identities = 75/125 (60%), Positives = 102/125 (81%)
Frame = +2
Query: 116 LTEEEIKRLYRIQKTLMQMLKDRGYFIADSEITMSLSQFVRKYGDNMKREDLVTLKAKRN 295
++E++I RL+RI++T+MQML+DRGY + D EI M+ QF+ K+G+ +KREDLV KAK+N
Sbjct: 1 MSEDDISRLFRIRRTVMQMLRDRGYLVLDLEINMNKLQFLEKFGEGVKREDLVINKAKKN 60
Query: 296 DSSDQLYIFFPDEAKVGVKTMKVYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFH 475
D +DQ+Y+FFP++AKVGVK +K Y RMK+ENV R ILVVQQ LTPFAR ++E+S K+
Sbjct: 61 DPADQIYVFFPNDAKVGVKQIKQYVERMKAENVTRGILVVQQALTPFARQSLAEVSQKYM 120
Query: 476 LEVFQ 490
LEVFQ
Sbjct: 121 LEVFQ 125
>gi|297830274|ref|XP_002883019.1| hypothetical protein ARALYDRAFT_341806
[Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 160 bits (404), Expect = 3e-037
Identities = 81/129 (62%), Positives = 103/129 (79%), Gaps = 2/129 (1%)
Frame = +2
Query: 110 MGLTEEEIKRLYRIQKTLMQMLKDRGYFIADSEITMSLSQFVRKYGDNMKREDLVTLKAK 289
M LT+EEIK+L+ +Q+TLMQMLKDRGY I DSEITM+L +F+ KYG+NMKR+ LVTLKAK
Sbjct: 1 MALTDEEIKQLFLVQRTLMQMLKDRGYSIEDSEITMTLGEFIEKYGENMKRKALVTLKAK 60
Query: 290 RNDSSDQLYIFFPDEAKVGVKTMKVYTNRMKSENVYRAILVVQ--QNLTPFARTCISEIS 463
+ND +D+LYIFFP++AKVGV MK Y NR+KSENV+RAILV Q + + A+ I
Sbjct: 61 KNDDNDKLYIFFPNKAKVGVADMKKYINRLKSENVFRAILVKQDIKEFSRHAQLSIGAAY 120
Query: 464 SKFHLEVFQ 490
KF++EVFQ
Sbjct: 121 PKFNIEVFQ 129
>gi|302795809|ref|XP_002979667.1| hypothetical protein SELMODRAFT_228648
[Selaginella moellendorffii]
Length = 206
Score = 157 bits (396), Expect = 3e-036
Identities = 72/127 (56%), Positives = 100/127 (78%)
Frame = +2
Query: 110 MGLTEEEIKRLYRIQKTLMQMLKDRGYFIADSEITMSLSQFVRKYGDNMKREDLVTLKAK 289
M ++ RLYRI++T+MQML+DR Y +AD E++++ QF K+GD KR+DLV KAK
Sbjct: 1 MAQLDDSTNRLYRIRRTIMQMLRDRDYLVADYEVSLTKEQFRDKFGDEPKRDDLVISKAK 60
Query: 290 RNDSSDQLYIFFPDEAKVGVKTMKVYTNRMKSENVYRAILVVQQNLTPFARTCISEISSK 469
R+D SDQ+++FFP+E KVGVKT+K Y RMKSE V+RAI+VVQ +LTPFA+ C+SE++ K
Sbjct: 61 RSDQSDQIFVFFPEEPKVGVKTIKTYAERMKSELVFRAIMVVQTSLTPFAKQCLSEMAPK 120
Query: 470 FHLEVFQ 490
+ +EVFQ
Sbjct: 121 YQIEVFQ 127
>gi|116785870|gb|ABK23892.1| unknown [Picea sitchensis]
Length = 191
Score = 154 bits (388), Expect = 2e-035
Identities = 72/123 (58%), Positives = 96/123 (78%)
Frame = +2
Query: 122 EEEIKRLYRIQKTLMQMLKDRGYFIADSEITMSLSQFVRKYGDNMKREDLVTLKAKRNDS 301
+E+ +L+RI++T++QML DR Y + D EI + QF+ K+G++ K+EDLV KAKRN
Sbjct: 4 DEQTNKLFRIRRTVLQMLNDRDYLVGDFEINTTKEQFLDKFGEDPKKEDLVINKAKRNSP 63
Query: 302 SDQLYIFFPDEAKVGVKTMKVYTNRMKSENVYRAILVVQQNLTPFARTCISEISSKFHLE 481
S+Q+++FFP+EAKVGVK++K Y RMKSE V+RAILVVQQ LTPFAR + E S KFHLE
Sbjct: 64 SEQIFVFFPEEAKVGVKSIKTYVERMKSEGVFRAILVVQQALTPFARQSVQEFSGKFHLE 123
Query: 482 VFQ 490
VFQ
Sbjct: 124 VFQ 126
>gi|194693176|gb|ACF80672.1| unknown [Zea mays]
Length = 127
Score = 152 bits (382), Expect = 1e-034
Identities = 73/79 (92%), Positives = 78/79 (98%)
Frame = +1
Query: 598 EAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVV 777
EAEML+NIKEHVLVPEHQVLT EEKKTLLERYT+KETQLPRIQ+TDPIARY+GL+RGQVV
Sbjct: 49 EAEMLINIKEHVLVPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLRRGQVV 108
Query: 778 KIIRPSETAGRYVTYRYVV 834
KIIRPSETAGRYVTYRYVV
Sbjct: 109 KIIRPSETAGRYVTYRYVV 127
>gi|226530454|ref|NP_001141164.1| hypothetical protein LOC100273250 [Zea mays]
Length = 210
Score = 152 bits (382), Expect = 1e-034
Identities = 73/79 (92%), Positives = 78/79 (98%)
Frame = +1
Query: 598 EAEMLVNIKEHVLVPEHQVLTTEEKKTLLERYTVKETQLPRIQVTDPIARYFGLKRGQVV 777
EAEML+NIKEHVLVPEHQVLT EEKKTLLERYT+KETQLPRIQ+TDPIARY+GL+RGQVV
Sbjct: 132 EAEMLINIKEHVLVPEHQVLTNEEKKTLLERYTLKETQLPRIQITDPIARYYGLRRGQVV 191
Query: 778 KIIRPSETAGRYVTYRYVV 834
KIIRPSETAGRYVTYRYVV
Sbjct: 192 KIIRPSETAGRYVTYRYVV 210
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,749,908,712,651
Number of Sequences: 15229318
Number of Extensions: 4749908712651
Number of Successful Extensions: 1126793398
Number of sequences better than 0.0: 0
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