BLASTX 7.6.2
Query= UN42949 /QuerySize=896
(895 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G53330.1 | Symbols: | FUNCTIONS IN: molecular... 294 5e-080
>TAIR9_protein||AT5G53330.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Ubiquitin-associated/translation elongation factor EF1B, N-terminal,
eukaryote (InterPro:IPR015940); Has 28 Blast hits to 28 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants -
15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr5:21639236-21640716 FORWARD
Length = 222
Score = 294 bits (752), Expect = 5e-080
Identities = 160/225 (71%), Positives = 176/225 (78%), Gaps = 20/225 (8%)
Frame = +2
Query: 95 MDYDFRNKS-GPSYGRPTY--PSPSPSSMYTGPP-GYPKIG---GGQPFFSPPPERTPSF 253
MDYD+RNKS GPSY RP Y PS SPS P GYPKIG G P F PPER SF
Sbjct: 1 MDYDYRNKSGGPSYPRPMYGPPSTSPSPSSNHPMYGYPKIGQQTGPGPQFFSPPERNSSF 60
Query: 254 QHNPS-SSGLGIKVTLKPDYRITPPPPLLPRVGDVPRSSFQFDFGLERKVLAEAEKENPD 430
QHN S SSG+GI+V LKP+YRITPPP LLPRVGD+ RSSFQFDFGLERKVLAEAEK+NPD
Sbjct: 61 QHNTSPSSGIGIRVNLKPEYRITPPPQLLPRVGDIHRSSFQFDFGLERKVLAEAEKDNPD 120
Query: 431 WSKFGSDHPPPPPQPANFSQPPPANFAQPLPEHSMGVDPVVMKY--AGLNREAVNISVAN 604
WSKFGS++P PA F +P P++ Q GVD VVMKY +GLNREAVNI+VAN
Sbjct: 121 WSKFGSENP-----PAKFHEPSPSSVGQ-----MQGVDHVVMKYTASGLNREAVNIAVAN 170
Query: 605 YGDNPTKVHEFANGFSAIREMGFPTNAVADALFMFENDTEKALSH 739
YGDNPTKV EFANGF+AIREMGFPTNAVADALFMFENDT+KAL+H
Sbjct: 171 YGDNPTKVQEFANGFTAIREMGFPTNAVADALFMFENDTDKALAH 215
Score = 145 bits (364), Expect = 5e-035
Identities = 74/97 (76%), Positives = 81/97 (83%), Gaps = 5/97 (5%)
Frame = +2
Query: 485 SQPPPANFAQPLPE---HSMGVDPVVMKY--AGLNREAVNISVANYGDNPTKVHEFANGF 649
S+ PPA F +P P GVD VVMKY +GLNREAVNI+VANYGDNPTKV EFANGF
Sbjct: 126 SENPPAKFHEPSPSSVGQMQGVDHVVMKYTASGLNREAVNIAVANYGDNPTKVQEFANGF 185
Query: 650 SAIREMGFPTNAVADALFMFENDTEKALSHLLHGSS* 760
+AIREMGFPTNAVADALFMFENDT+KAL+HLLHGSS*
Sbjct: 186 TAIREMGFPTNAVADALFMFENDTDKALAHLLHGSS* 222
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,024,675,335
Number of Sequences: 33410
Number of Extensions: 21024675335
Number of Successful Extensions: 664527818
Number of sequences better than 0.0: 0
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