BLASTX 7.6.2
Query= UN43042 /QuerySize=1088
(1087 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associa... 82 5e-015
sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizos... 76 4e-013
sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associa... 75 1e-012
sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associa... 75 1e-012
sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associate... 74 1e-012
sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associa... 74 2e-012
sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associa... 74 2e-012
sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synapto... 70 3e-011
sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associa... 69 7e-011
sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associate... 66 3e-010
sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associa... 66 4e-010
sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associa... 63 3e-009
sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associa... 63 3e-009
sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associate... 63 4e-009
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein
C16G5.05c OS=Schizosaccharomyces pombe GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 82 bits (202), Expect = 5e-015
Identities = 51/137 (37%), Positives = 68/137 (49%), Gaps = 5/137 (3%)
Frame = +3
Query: 234 NKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSSSEVLVTMQAQKEAPA-DMQCKDKFLLQ 410
N V FKVKTT PK YCVRPN+G + P+S+ V V +QA KE PA D +C+DKFL+Q
Sbjct: 27 NPNPEPVIFKVKTTAPKHYCVRPNSGKIEPKSTVNVQVLLQAMKEEPAPDFKCRDKFLIQ 86
Query: 411 CVVASPGVTPKDVTPEMF---SKEAGNRVEETKLRVVYVDPPQPPSPVREGSEEGSSPRA 581
+ T F ++ G + + K+R VY QPP + E S+
Sbjct: 87 SMAIGDADTSNVENYHEFWTEMEKQGRSIFDRKIRCVY-STKQPPQSADKQVENTSTSNP 145
Query: 582 SVSDNGNNNAPDFTAAP 632
VS G+ N P
Sbjct: 146 PVSVEGSENLASSVGGP 162
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces
pombe GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 76 bits (185), Expect = 4e-013
Identities = 42/115 (36%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Frame = +3
Query: 186 FPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSSSEVLVTMQAQK 365
FP L + + C L L N + FKVKTT PK+YCVRPN G + S+ V V +Q
Sbjct: 11 FPRPLTRLVKCDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVILQPLD 70
Query: 366 EAPA-DMQCKDKFLLQCVVASPGVTPKDVTPEMFSKEAGNRVEETKLRVVYVDPP 527
PA +C+DKFL+Q P + D+ +++++ + + E K+R VY + P
Sbjct: 71 HEPAPGTKCRDKFLVQSTELKPELQGMDIA-DIWTQVSKANISERKIRCVYSEGP 124
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A
OS=Homo sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 75 bits (182), Expect = 1e-012
Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 15/168 (8%)
Frame = +3
Query: 126 AGDLIRMSNALLDIDPIDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPN 305
+G + + L+ P DL+F ++ +L L N +D V FKVKTT P++YCVRPN
Sbjct: 5 SGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPN 64
Query: 306 TGVVLPRSSSEVLVTMQAQKEAPADMQCKDKFLLQCVVASPGVTPKDVTPEMFSKEAGNR 485
+G++ P S+ V V +Q P + + K KF++Q + A P + + ++ + +
Sbjct: 65 SGIIDPGSTVTVSVMLQPFDYDPNE-KSKHKFMVQTIFAPPNTSDMEA---VWKEAKPDE 120
Query: 486 VEETKLRVVYVDP----------PQPPSPVREGSEEGSSPRA-SVSDN 596
+ ++KLR V+ P P P+ ++G P+ SVS N
Sbjct: 121 LMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLN 168
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A
OS=Pongo abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 75 bits (182), Expect = 1e-012
Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 15/168 (8%)
Frame = +3
Query: 126 AGDLIRMSNALLDIDPIDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPN 305
+G + + L+ P DL+F ++ +L L N +D V FKVKTT P++YCVRPN
Sbjct: 5 SGAMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPN 64
Query: 306 TGVVLPRSSSEVLVTMQAQKEAPADMQCKDKFLLQCVVASPGVTPKDVTPEMFSKEAGNR 485
+G++ P S+ V V +Q P + + K KF++Q + A P + + ++ + +
Sbjct: 65 SGIIDPGSTVTVSVMLQPFDYDPNE-KSKHKFMVQTIFAPPNTSDMEA---VWKEAKPDE 120
Query: 486 VEETKLRVVYVDP----------PQPPSPVREGSEEGSSPRA-SVSDN 596
+ ++KLR V+ P P P+ ++G P+ SVS N
Sbjct: 121 LMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLN 168
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A
OS=Rattus norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 74 bits (181), Expect = 1e-012
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 15/168 (8%)
Frame = +3
Query: 126 AGDLIRMSNALLDIDPIDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPN 305
+G + + L+ P DL+F ++ +L L N +D V FKVKTT P++YCVRPN
Sbjct: 5 SGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPN 64
Query: 306 TGVVLPRSSSEVLVTMQAQKEAPADMQCKDKFLLQCVVASPGVTPKDVTPEMFSKEAGNR 485
+GV+ P S V V +Q P + + K KF++Q + A P ++ + ++ + +
Sbjct: 65 SGVIDPGSIVTVSVMLQPFDYDPNE-KSKHKFMVQTIFAPPNISDMEA---VWKEAKPDE 120
Query: 486 VEETKLRVVYVDP----------PQPPSPVREGSEEGSSPRA-SVSDN 596
+ ++KLR V+ P P P+ ++G P+ SVS N
Sbjct: 121 LMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLN 168
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A
OS=Mus musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 74 bits (180), Expect = 2e-012
Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 15/168 (8%)
Frame = +3
Query: 126 AGDLIRMSNALLDIDPIDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPN 305
+G + + L+ P DL+F ++ +L L N +D V FKVKTT P++YCVRPN
Sbjct: 5 SGAMAKHEQILVLDPPSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPN 64
Query: 306 TGVVLPRSSSEVLVTMQAQKEAPADMQCKDKFLLQCVVASPGVTPKDVTPEMFSKEAGNR 485
+G++ P S V V +Q P + + K KF++Q + A P ++ + ++ + +
Sbjct: 65 SGIIDPGSIVTVSVMLQPFDYDPNE-KSKHKFMVQTIFAPPNISDMEA---VWKEAKPDE 120
Query: 486 VEETKLRVVYVDP----------PQPPSPVREGSEEGSSPRA-SVSDN 596
+ ++KLR V+ P P P+ ++G P+ SVS N
Sbjct: 121 LMDSKLRCVFEMPNENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLN 168
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A
OS=Bos taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 74 bits (179), Expect = 2e-012
Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 17/169 (10%)
Frame = +3
Query: 126 AGDLIRMSNALLDIDPIDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPN 305
+G + + L+ P DL+F ++ +L L N +D V FKVKTT P++YCVRPN
Sbjct: 5 SGTMAKHEQILVLDPPTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPN 64
Query: 306 TGVVLPRSSSEVLVTMQAQKEAPADMQCKDKFLLQCVVASPGVTPKDVTPEMFSKEAGNR 485
+G++ P + V V +Q P + + K KF++Q + A P ++ + ++ + +
Sbjct: 65 SGIIDPGLTVTVSVMLQPFDYDPNE-KSKHKFMVQTIFAPPNISDMEA---VWKEAKPDE 120
Query: 486 VEETKLRVVYVDP----------PQPPSPVREGSEEGSSPR---ASVSD 593
+ ++KLR V+ P P P+ ++G P+ S+SD
Sbjct: 121 LMDSKLRCVFEMPNENDKLNDMEPSKAVPLNAAKQDGPVPKPHSVSLSD 169
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding
protein OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 70 bits (169), Expect = 3e-011
Identities = 43/117 (36%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Frame = +3
Query: 177 DLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSSSEVLVTMQ 356
+L+F ++ L L+N TD + FKVKTT PK+YCVRPN+G++ P++S V V +Q
Sbjct: 15 ELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILEPKTSIAVAVMLQ 74
Query: 357 AQKEAPADMQCKDKFLLQCVVASPGVTPKDVTPEMFSKEA-GNRVEETKLRVVYVDP 524
P + K KF++Q + A V + E+ K+A + +TKLR V+ P
Sbjct: 75 PFNYDPNEKN-KHKFMVQSMYAPDHVVE---SQELLWKDAPPESLMDTKLRCVFEMP 127
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein
SCS2 OS=Saccharomyces cerevisiae GN=SCS2 PE=1 SV=3
Length = 244
Score = 69 bits (166), Expect = 7e-011
Identities = 49/156 (31%), Positives = 75/156 (48%), Gaps = 4/156 (2%)
Frame = +3
Query: 159 LDIDPIDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSSSE 338
++I P L + L +Q + ++N +D +AFKVKTT PK YCVRPN VV P + +
Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQ 63
Query: 339 VLVTMQAQKEAP-ADMQCKDKFLLQCVVASPGVTPKDVTPEMFSKEAGNRVE--ETKLRV 509
V V E P AD +C+DKFL+ + + + K V EA + + K++V
Sbjct: 64 VQVIFLGLTEEPAADFKCRDKFLVITLPSPYDLNGKAVADVWSDLEAEFKQQAISKKIKV 123
Query: 510 VY-VDPPQPPSPVREGSEEGSSPRASVSDNGNNNAP 614
Y + P P+ + E + V D+ P
Sbjct: 124 KYLISPDVHPAQNQNIQENKETVEPVVQDSEPKEVP 159
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B
OS=Rattus norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 66 bits (160), Expect = 3e-010
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Frame = +3
Query: 156 LLDIDP-IDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSS 332
+L ++P +L+F ++ +L L N TD V FKVKTT P++YCVRPN+GV+ +S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGAS 66
Query: 333 SEVLVTMQAQKEAPADMQCKDKFLLQCVVASPGVTPKDVTPEMFSKEAGNRVEETKLRVV 512
V V +Q P + + K KF++Q + A P + + ++ + + ++KLR V
Sbjct: 67 LNVSVMLQPFDYDPNE-KSKHKFMVQSMFAPPDTSDMEA---VWKEAKPEDLMDSKLRCV 122
Query: 513 YVDPPQPPSP 542
+ P + P
Sbjct: 123 FELPAENAKP 132
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B
OS=Mus musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 66 bits (159), Expect = 4e-010
Identities = 42/130 (32%), Positives = 71/130 (54%), Gaps = 5/130 (3%)
Frame = +3
Query: 156 LLDIDP-IDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSS 332
+L ++P +L+F ++ +L L N TD V FKVKTT P++YCVRPN+GV+ +S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGAS 66
Query: 333 SEVLVTMQAQKEAPADMQCKDKFLLQCVVASPGVTPKDVTPEMFSKEAGNRVEETKLRVV 512
V V +Q P + + K KF++Q + A P + + ++ + + ++KLR V
Sbjct: 67 LNVSVMLQPFDYDPNE-KSKHKFMVQSMFAPPDTSDMEA---VWKEAKPEDLMDSKLRCV 122
Query: 513 YVDPPQPPSP 542
+ P + P
Sbjct: 123 FELPAENAKP 132
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B
OS=Bos taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 63 bits (152), Expect = 3e-009
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Frame = +3
Query: 156 LLDIDP-IDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSS 332
+L ++P +L+F ++ +L L N TD V FKVKTT P++YCVRPN+G++ +S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66
Query: 333 SEVLVTMQAQKEAPADMQCKDKFLLQCVVASPGVTPKDVTP-EMFSKEA-GNRVEETKLR 506
V V +Q P + + K KF++Q + A P D + E KEA + ++KLR
Sbjct: 67 INVSVMLQPFDYDPNE-KSKHKFMVQSMFA-----PTDTSDMEAVWKEAKPEDLMDSKLR 120
Query: 507 VVYVDPPQPPSP 542
V+ P + P
Sbjct: 121 CVFELPAENDKP 132
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C
OS=Homo sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 63 bits (152), Expect = 3e-009
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Frame = +3
Query: 156 LLDIDP-IDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSS 332
+L ++P +L+F ++ +L L N TD V FKVKTT P++YCVRPN+G++ +S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66
Query: 333 SEVLVTMQAQKEAPADMQCKDKFLLQCVVASPGVTPKDVTP-EMFSKEA-GNRVEETKLR 506
V V +Q P + + K KF++Q + A P D + E KEA + ++KLR
Sbjct: 67 INVSVMLQPFDYDPNE-KSKHKFMVQSMFA-----PTDTSDMEAVWKEAKPEDLMDSKLR 120
Query: 507 VVYVDPPQPPSP 542
V+ P + P
Sbjct: 121 CVFELPAENDKP 132
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B
OS=Sus scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 63 bits (151), Expect = 4e-009
Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 9/132 (6%)
Frame = +3
Query: 156 LLDIDP-IDLQFPFELKKQISCSLYLANKTDNYVAFKVKTTNPKKYCVRPNTGVVLPRSS 332
+L ++P +L+F ++ +L L N TD V FKVKTT P++YCVRPN+G++ +S
Sbjct: 7 VLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGAS 66
Query: 333 SEVLVTMQAQKEAPADMQCKDKFLLQCVVASPGVTPKDVTP-EMFSKEA-GNRVEETKLR 506
V V +Q P + + K KF++Q + A P D + E KEA + ++KLR
Sbjct: 67 INVSVMLQPFDYDPNE-KSKHKFMVQSMFA-----PADTSDMEAAWKEAKPEDLMDSKLR 120
Query: 507 VVYVDPPQPPSP 542
V+ P + P
Sbjct: 121 CVFELPAENDKP 132
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,931,892,944
Number of Sequences: 518415
Number of Extensions: 164931892944
Number of Successful Extensions: 1021520109
Number of sequences better than 0.0: 0
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