BLASTX 7.6.2
Query= UN43080 /QuerySize=920
(919 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G07200.1 | Symbols: | zinc finger (C3HC4-type... 213 2e-055
TAIR9_protein||AT3G07200.2 | Symbols: | zinc finger (C3HC4-type... 213 2e-055
TAIR9_protein||AT5G48655.2 | Symbols: | zinc finger (C3HC4-type... 148 5e-036
TAIR9_protein||AT5G48655.1 | Symbols: | zinc finger (C3HC4-type... 148 5e-036
TAIR9_protein||AT5G48655.3 | Symbols: | zinc finger (C3HC4-type... 148 5e-036
TAIR9_protein||AT5G05130.1 | Symbols: | SNF2 domain-containing ... 51 1e-006
TAIR9_protein||AT4G21070.1 | Symbols: ATBRCA1, BRCA1 | ATBRCA1; ... 49 4e-006
>TAIR9_protein||AT3G07200.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:2291343-2292223 FORWARD
Length = 183
Score = 213 bits (540), Expect = 2e-055
Identities = 117/190 (61%), Positives = 135/190 (71%), Gaps = 10/190 (5%)
Frame = +1
Query: 100 MSSRSDRVVTRSSRRSPQVNNVNGTQQSEQPRTGQQPPIVYGPPTIDVDAIEDEDDDDVV 279
M+SR R R RR N + Q + P IV PP I+V AI EDDDDVV
Sbjct: 1 MASRVVRTSMRLRRRDGVTQNEHQGDQQVADQAPTVPQIVATPPRINVVAI--EDDDDVV 58
Query: 280 ESTASAFDRAKRHKSGGSQRGPLLVDVESGGTTRLSKNRTKRQSDQA---NVELNNPRKS 450
ESTASAF +AK +KS ++RG +VDVES G R T+R+SDQ +VELN PRKS
Sbjct: 59 ESTASAFAQAK-NKSRSARRGSQVVDVESAGANR----STRRRSDQTSVDSVELNKPRKS 113
Query: 451 KTVAPPVEEPKFNCPICLCPFTEEVSTKCGHIFCKKCIKLAVSVQAKCPTCRKRVLAKDL 630
K VAPPVEEPKF+CPICLCPFT+EVSTKCGHIFCKKCIK A+S+QAKCPTCRK++ KDL
Sbjct: 114 KAVAPPVEEPKFSCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPTCRKKITVKDL 173
Query: 631 IRVFLPTTR* 660
IRVFLPTTR*
Sbjct: 174 IRVFLPTTR* 183
>TAIR9_protein||AT3G07200.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:2291343-2292223 FORWARD
Length = 183
Score = 213 bits (540), Expect = 2e-055
Identities = 117/190 (61%), Positives = 135/190 (71%), Gaps = 10/190 (5%)
Frame = +1
Query: 100 MSSRSDRVVTRSSRRSPQVNNVNGTQQSEQPRTGQQPPIVYGPPTIDVDAIEDEDDDDVV 279
M+SR R R RR N + Q + P IV PP I+V AI EDDDDVV
Sbjct: 1 MASRVVRTSMRLRRRDGVTQNEHQGDQQVADQAPTVPQIVATPPRINVVAI--EDDDDVV 58
Query: 280 ESTASAFDRAKRHKSGGSQRGPLLVDVESGGTTRLSKNRTKRQSDQA---NVELNNPRKS 450
ESTASAF +AK +KS ++RG +VDVES G R T+R+SDQ +VELN PRKS
Sbjct: 59 ESTASAFAQAK-NKSRSARRGSQVVDVESAGANR----STRRRSDQTSVDSVELNKPRKS 113
Query: 451 KTVAPPVEEPKFNCPICLCPFTEEVSTKCGHIFCKKCIKLAVSVQAKCPTCRKRVLAKDL 630
K VAPPVEEPKF+CPICLCPFT+EVSTKCGHIFCKKCIK A+S+QAKCPTCRK++ KDL
Sbjct: 114 KAVAPPVEEPKFSCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPTCRKKITVKDL 173
Query: 631 IRVFLPTTR* 660
IRVFLPTTR*
Sbjct: 174 IRVFLPTTR* 183
>TAIR9_protein||AT5G48655.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:19731575-19732486 REVERSE
Length = 204
Score = 148 bits (373), Expect = 5e-036
Identities = 89/200 (44%), Positives = 115/200 (57%), Gaps = 24/200 (12%)
Frame = +1
Query: 124 VTRSSRRSPQVNNVN-------GTQQSEQPRTGQQPPIVYGPPTIDVDAIEDEDDDDVVE 282
V R +RR V ++N GT S + T P P IDVDAIED+ +
Sbjct: 8 VPRGNRRRKAVIDLNAVPVDQEGTSASVRTLTVPITPSQPAPTMIDVDAIEDDVIESSAS 67
Query: 283 STASAFDRAKRHK---------SGGSQRGPLLVDVESGGTTRLSKNRTKRQSDQANV--E 429
+ A A +++ + SGG+ R P + S R+ + + + A+V E
Sbjct: 68 AFAEAKSKSRNARRRPLMVDVESGGTTRFPANI---SNKRRRIPSSESVIDCEHASVNDE 124
Query: 430 LN---NPRKSKTVAPPVEEPKFNCPICLCPFTEEVSTKCGHIFCKKCIKLAVSVQAKCPT 600
+N +SK APP EEPKF CPIC+CPFTEE+STKCGHIFCK CIK+A+S Q KCPT
Sbjct: 125 VNMSSRVSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQGKCPT 184
Query: 601 CRKRVLAKDLIRVFLPTTR* 660
CRK+V AK+LIRVFLPTTR*
Sbjct: 185 CRKKVTAKELIRVFLPTTR* 204
>TAIR9_protein||AT5G48655.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:19731575-19732486 REVERSE
Length = 204
Score = 148 bits (373), Expect = 5e-036
Identities = 89/200 (44%), Positives = 115/200 (57%), Gaps = 24/200 (12%)
Frame = +1
Query: 124 VTRSSRRSPQVNNVN-------GTQQSEQPRTGQQPPIVYGPPTIDVDAIEDEDDDDVVE 282
V R +RR V ++N GT S + T P P IDVDAIED+ +
Sbjct: 8 VPRGNRRRKAVIDLNAVPVDQEGTSASVRTLTVPITPSQPAPTMIDVDAIEDDVIESSAS 67
Query: 283 STASAFDRAKRHK---------SGGSQRGPLLVDVESGGTTRLSKNRTKRQSDQANV--E 429
+ A A +++ + SGG+ R P + S R+ + + + A+V E
Sbjct: 68 AFAEAKSKSRNARRRPLMVDVESGGTTRFPANI---SNKRRRIPSSESVIDCEHASVNDE 124
Query: 430 LN---NPRKSKTVAPPVEEPKFNCPICLCPFTEEVSTKCGHIFCKKCIKLAVSVQAKCPT 600
+N +SK APP EEPKF CPIC+CPFTEE+STKCGHIFCK CIK+A+S Q KCPT
Sbjct: 125 VNMSSRVSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQGKCPT 184
Query: 601 CRKRVLAKDLIRVFLPTTR* 660
CRK+V AK+LIRVFLPTTR*
Sbjct: 185 CRKKVTAKELIRVFLPTTR* 204
>TAIR9_protein||AT5G48655.3 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:19731575-19732486 REVERSE
Length = 204
Score = 148 bits (373), Expect = 5e-036
Identities = 89/200 (44%), Positives = 115/200 (57%), Gaps = 24/200 (12%)
Frame = +1
Query: 124 VTRSSRRSPQVNNVN-------GTQQSEQPRTGQQPPIVYGPPTIDVDAIEDEDDDDVVE 282
V R +RR V ++N GT S + T P P IDVDAIED+ +
Sbjct: 8 VPRGNRRRKAVIDLNAVPVDQEGTSASVRTLTVPITPSQPAPTMIDVDAIEDDVIESSAS 67
Query: 283 STASAFDRAKRHK---------SGGSQRGPLLVDVESGGTTRLSKNRTKRQSDQANV--E 429
+ A A +++ + SGG+ R P + S R+ + + + A+V E
Sbjct: 68 AFAEAKSKSRNARRRPLMVDVESGGTTRFPANI---SNKRRRIPSSESVIDCEHASVNDE 124
Query: 430 LN---NPRKSKTVAPPVEEPKFNCPICLCPFTEEVSTKCGHIFCKKCIKLAVSVQAKCPT 600
+N +SK APP EEPKF CPIC+CPFTEE+STKCGHIFCK CIK+A+S Q KCPT
Sbjct: 125 VNMSSRVSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQGKCPT 184
Query: 601 CRKRVLAKDLIRVFLPTTR* 660
CRK+V AK+LIRVFLPTTR*
Sbjct: 185 CRKKVTAKELIRVFLPTTR* 204
>TAIR9_protein||AT5G05130.1 | Symbols: | SNF2 domain-containing protein /
helicase domain-containing protein / RING finger domain-containing
protein | chr5:1512173-1514918 FORWARD
Length = 863
Score = 51 bits (120), Expect = 1e-006
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 451 KTVAPPVEEPKFNCPICLCPFTEEVSTKCGHIFCKKCIKLAVS-VQAKCPTCRKRVLAKD 627
K VA + F+CPIC+ P T + T+C HIFC+ CI + + CP CR + D
Sbjct: 603 KLVAALQDGEDFDCPICISPPTNIIITRCAHIFCRACILQTLQRSKPLCPLCRGSLTQSD 662
Query: 628 L 630
L
Sbjct: 663 L 663
>TAIR9_protein||AT4G21070.1 | Symbols: ATBRCA1, BRCA1 | ATBRCA1;
ubiquitin-protein ligase | chr4:11248174-11252633 FORWARD
Length = 942
Score = 49 bits (115), Expect = 4e-006
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +1
Query: 481 KFNCPICLCPFTEEVSTKCGHIFCKKCIKLAVSVQAKCPTCR 606
+ CPICL + VS C H+FC CI ++ + A CP C+
Sbjct: 13 ELKCPICLSLYNSAVSLSCNHVFCNACIVKSMKMDATCPVCK 54
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,069,906,629
Number of Sequences: 33410
Number of Extensions: 21069906629
Number of Successful Extensions: 664540447
Number of sequences better than 0.0: 0
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