BLASTX 7.6.2
Query= UN43082 /QuerySize=708
(707 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT... 165 7e-039
gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidop... 156 3e-036
gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidop... 156 3e-036
gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana] 156 3e-036
gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor ... 156 3e-036
gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-cont... 81 1e-013
gi|224069945|ref|XP_002303090.1| predicted protein [Populus tric... 63 3e-008
gi|26185713|emb|CAD58595.1| putative bHLH transcription factor [... 61 2e-007
gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT... 59 4e-007
gi|75313940|sp|Q9SVU7.1|BH056_ARATH RecName: Full=Putative trans... 57 2e-006
>gi|297832118|ref|XP_002883941.1| hypothetical protein ARALYDRAFT_319546
[Arabidopsis lyrata subsp. lyrata]
Length = 486
Score = 165 bits (416), Expect = 7e-039
Identities = 83/122 (68%), Positives = 91/122 (74%), Gaps = 5/122 (4%)
Frame = +1
Query: 190 QVVLHNQRPNAKKQPPPPPPFIPFPNMLASQRPLPPQTRMGG----YPAVQASDPSRVYG 357
Q + H QP PPP F+PFPNMLA+QRPLP QT+MGG YP V ASDPSRV+
Sbjct: 365 QYMPHMAMRMGMNQPLPPPSFMPFPNMLAAQRPLPTQTQMGGSTPQYP-VHASDPSRVFV 423
Query: 358 SNQQFVPNSNQAPYSGYMDPYQQFRSLHPSQPPQFQNQAASYPSSSRVSSTKESEDQGNQ 537
NQQ+ P S Q Y GYMDPYQQFR LHP+QPPQFQNQA SYPSSSRVSSTKES+DQGN
Sbjct: 424 PNQQYDPTSGQPQYPGYMDPYQQFRGLHPTQPPQFQNQATSYPSSSRVSSTKESDDQGNH 483
Query: 538 TT 543
T
Sbjct: 484 KT 485
Score = 87 bits (213), Expect = 3e-015
Identities = 51/88 (57%), Positives = 55/88 (62%), Gaps = 10/88 (11%)
Frame = +1
Query: 46 HHFVPDFETDDDYVNANTNPSSSN-LARKPIIGEQEEDGDLMELLWHNGQVVLHNQR--- 213
HHFVPDF+TDDDYVN N N SS N L RK I E+D DLMELLW NGQVV+ NQR
Sbjct: 2 HHFVPDFDTDDDYVNTNNNNSSLNHLPRKSITTMGEDDDDLMELLWQNGQVVVQNQRLHN 61
Query: 214 PNAKKQPPPPPPFIPFPNMLASQRPLPP 297
N KK P FP L Q P+PP
Sbjct: 62 NNTKK-----PSSSSFPTKLL-QPPIPP 83
>gi|30680909|ref|NP_179608.2| transcription factor PIF1 [Arabidopsis thaliana]
Length = 478
Score = 156 bits (393), Expect = 3e-036
Identities = 81/123 (65%), Positives = 89/123 (72%), Gaps = 6/123 (4%)
Frame = +1
Query: 190 QVVLHNQRPNAKKQPPPPPPFIPFPNMLASQRPLPPQTRMGG----YPAVQASDPSRVYG 357
Q + H QP PPP F+PFPNMLA+QRPLP QT M G YP V ASDPSRV+
Sbjct: 356 QYMPHMAMGMGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGSGPQYP-VHASDPSRVFV 414
Query: 358 SNQQFVPNSNQAPY-SGYMDPYQQFRSLHPSQPPQFQNQAASYPSSSRVSSTKESEDQGN 534
NQQ+ P S Q Y +GY DPYQQFR LHP+QPPQFQNQA SYPSSSRVSS+KESED GN
Sbjct: 415 PNQQYDPTSGQPQYPAGYTDPYQQFRGLHPTQPPQFQNQATSYPSSSRVSSSKESEDHGN 474
Query: 535 QTT 543
TT
Sbjct: 475 HTT 477
Score = 81 bits (199), Expect = 1e-013
Identities = 46/84 (54%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Frame = +1
Query: 49 HFVPDFETDDDYVNANTNPSSSNLARKPIIGEQEEDGDLMELLWHNGQVVLHNQRPNAKK 228
HFVPDF+TDDDYVN N N S ++L RK I ED DLMELLW NGQVV+ NQR + KK
Sbjct: 3 HFVPDFDTDDDYVN-NHNSSLNHLPRKSIT-TMGEDDDLMELLWQNGQVVVQNQRLHTKK 60
Query: 229 QPPPPPPFIPFPNMLASQRPLPPQ 300
PP + P+M Q+P Q
Sbjct: 61 PSSSPPKLL--PSMDPQQQPSSDQ 82
>gi|30680903|ref|NP_849996.1| transcription factor PIF1 [Arabidopsis thaliana]
Length = 407
Score = 156 bits (393), Expect = 3e-036
Identities = 81/123 (65%), Positives = 89/123 (72%), Gaps = 6/123 (4%)
Frame = +1
Query: 190 QVVLHNQRPNAKKQPPPPPPFIPFPNMLASQRPLPPQTRMGG----YPAVQASDPSRVYG 357
Q + H QP PPP F+PFPNMLA+QRPLP QT M G YP V ASDPSRV+
Sbjct: 285 QYMPHMAMGMGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGSGPQYP-VHASDPSRVFV 343
Query: 358 SNQQFVPNSNQAPY-SGYMDPYQQFRSLHPSQPPQFQNQAASYPSSSRVSSTKESEDQGN 534
NQQ+ P S Q Y +GY DPYQQFR LHP+QPPQFQNQA SYPSSSRVSS+KESED GN
Sbjct: 344 PNQQYDPTSGQPQYPAGYTDPYQQFRGLHPTQPPQFQNQATSYPSSSRVSSSKESEDHGN 403
Query: 535 QTT 543
TT
Sbjct: 404 HTT 406
>gi|4580456|gb|AAD24380.1| unknown protein [Arabidopsis thaliana]
Length = 490
Score = 156 bits (393), Expect = 3e-036
Identities = 81/123 (65%), Positives = 89/123 (72%), Gaps = 6/123 (4%)
Frame = +1
Query: 190 QVVLHNQRPNAKKQPPPPPPFIPFPNMLASQRPLPPQTRMGG----YPAVQASDPSRVYG 357
Q + H QP PPP F+PFPNMLA+QRPLP QT M G YP V ASDPSRV+
Sbjct: 356 QYMPHMAMGMGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGSGPQYP-VHASDPSRVFV 414
Query: 358 SNQQFVPNSNQAPY-SGYMDPYQQFRSLHPSQPPQFQNQAASYPSSSRVSSTKESEDQGN 534
NQQ+ P S Q Y +GY DPYQQFR LHP+QPPQFQNQA SYPSSSRVSS+KESED GN
Sbjct: 415 PNQQYDPTSGQPQYPAGYTDPYQQFRGLHPTQPPQFQNQATSYPSSSRVSSSKESEDHGN 474
Query: 535 QTT 543
TT
Sbjct: 475 HTT 477
Score = 81 bits (199), Expect = 1e-013
Identities = 46/84 (54%), Positives = 54/84 (64%), Gaps = 4/84 (4%)
Frame = +1
Query: 49 HFVPDFETDDDYVNANTNPSSSNLARKPIIGEQEEDGDLMELLWHNGQVVLHNQRPNAKK 228
HFVPDF+TDDDYVN N N S ++L RK I ED DLMELLW NGQVV+ NQR + KK
Sbjct: 3 HFVPDFDTDDDYVN-NHNSSLNHLPRKSIT-TMGEDDDLMELLWQNGQVVVQNQRLHTKK 60
Query: 229 QPPPPPPFIPFPNMLASQRPLPPQ 300
PP + P+M Q+P Q
Sbjct: 61 PSSSPPKLL--PSMDPQQQPSSDQ 82
>gi|110737548|dbj|BAF00716.1| putative bHLH transcription factor [Arabidopsis
thaliana]
Length = 407
Score = 156 bits (393), Expect = 3e-036
Identities = 81/123 (65%), Positives = 89/123 (72%), Gaps = 6/123 (4%)
Frame = +1
Query: 190 QVVLHNQRPNAKKQPPPPPPFIPFPNMLASQRPLPPQTRMGG----YPAVQASDPSRVYG 357
Q + H QP PPP F+PFPNMLA+QRPLP QT M G YP V ASDPSRV+
Sbjct: 285 QYMPHMAMGMGMNQPIPPPSFMPFPNMLAAQRPLPTQTHMAGSGPQYP-VHASDPSRVFV 343
Query: 358 SNQQFVPNSNQAPY-SGYMDPYQQFRSLHPSQPPQFQNQAASYPSSSRVSSTKESEDQGN 534
NQQ+ P S Q Y +GY DPYQQFR LHP+QPPQFQNQA SYPSSSRVSS+KESED GN
Sbjct: 344 PNQQYDPTSGQPQYPAGYTDPYQQFRGLHPTQPPQFQNQATSYPSSSRVSSSKESEDHGN 403
Query: 535 QTT 543
TT
Sbjct: 404 HTT 406
>gi|240256101|ref|NP_194609.5| basic helix-loop-helix domain-containing protein
[Arabidopsis thaliana]
Length = 445
Score = 81 bits (198), Expect = 1e-013
Identities = 50/112 (44%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
Frame = +1
Query: 241 PPPFIPFPN-------MLASQRPLPPQTRMGGYPAVQASDPSRVYGSNQQFVPNSNQAPY 399
PPPFIPFP +A P P R +P +Q DPSRV + Q P SNQ +
Sbjct: 335 PPPFIPFPGTSFPMPAQMAGVGPSYPAPRY-PFPNIQTFDPSRVRLPSPQPNPVSNQPQF 393
Query: 400 SGYMDPYQQFRSLHPSQ---PPQFQNQAASYPSSSRVSSTKESEDQGNQTTS 546
YM+PY QF H Q PP FQ Q S SS + SS+KE EDQ NQ T+
Sbjct: 394 PAYMNPYSQFAGPHQLQQPPPPPFQGQTTSQLSSGQASSSKEPEDQENQPTA 445
>gi|224069945|ref|XP_002303090.1| predicted protein [Populus trichocarpa]
Length = 615
Score = 63 bits (152), Expect = 3e-008
Identities = 32/61 (52%), Positives = 39/61 (63%), Gaps = 5/61 (8%)
Frame = +1
Query: 58 PDFETDDDYVNANTNPSSSNLARKPIIGEQEEDGDLMELLWHNGQVVLHNQRPNAKKQPP 237
PDFE DDDY + PS+ RKP + E+E +MELLW NGQVV+H+QR K PP
Sbjct: 6 PDFEMDDDY-SLPPPPSTHTRPRKPAMQEEE----IMELLWQNGQVVMHSQRSQKKSSPP 60
Query: 238 P 240
P
Sbjct: 61 P 61
>gi|26185713|emb|CAD58595.1| putative bHLH transcription factor [Arabidopsis
thaliana]
Length = 175
Score = 61 bits (146), Expect = 2e-007
Identities = 39/100 (39%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Frame = +1
Query: 241 PPPFIPFPNM-------LASQRPLPPQTRMGGYPAVQASDPSRVYGSNQQFVPNSNQAPY 399
PPPF+PFP +A P P R +P QASD SRV+ + P NQ +
Sbjct: 77 PPPFVPFPGKTFPRPGHMAGVGPSYPALRY-PFPDTQASDLSRVHVPSLHSNPVPNQPRF 135
Query: 400 SGYMDPYQQFRSLHPSQPP--QFQNQAASYPSSSRVSSTK 513
Y++PY QF LH Q P Q Q S PS S S++K
Sbjct: 136 PAYINPYSQFVGLHQMQQPPLPLQGQPTSQPSFSHASTSK 175
>gi|297803176|ref|XP_002869472.1| hypothetical protein ARALYDRAFT_913634
[Arabidopsis lyrata subsp. lyrata]
Length = 1780
Score = 59 bits (142), Expect = 4e-007
Identities = 38/87 (43%), Positives = 45/87 (51%), Gaps = 15/87 (17%)
Frame = +1
Query: 241 PPPFIPFPN-------MLASQRPLPPQTRMGGYP--AVQASDPSRVYGSNQQFVPNSNQA 393
PPPFIPFP+ +A P P R YP +Q DPSRV+ + Q P SNQ
Sbjct: 670 PPPFIPFPDTPFPRPAQMADVDPSYPAPR---YPLSGIQTFDPSRVHLRSPQPNPVSNQP 726
Query: 394 PYSGYMDPYQQFRSLHPSQ---PPQFQ 465
+ YM+PY QF LH Q PP FQ
Sbjct: 727 QFPAYMNPYSQFAGLHQLQQPPPPPFQ 753
>gi|75313940|sp|Q9SVU7.1|BH056_ARATH RecName: Full=Putative transcription factor
bHLH056; AltName: Full=Basic helix-loop-helix protein 56;
Short=AtbHLH56; Short=bHLH 56; AltName: Full=Transcription factor EN
106; AltName: Full=bHLH transcription factor bHLH056
Length = 478
Score = 57 bits (136), Expect = 2e-006
Identities = 36/85 (42%), Positives = 42/85 (49%), Gaps = 11/85 (12%)
Frame = +1
Query: 241 PPPFIPFPN-------MLASQRPLPPQTRMGGYPAVQASDPSRVYGSNQQFVPNSNQAPY 399
PPPFIPFP +A P P R +P +Q DPSRV + Q P SNQ +
Sbjct: 378 PPPFIPFPGTSFPMPAQMAGVGPSYPAPRY-PFPNIQTFDPSRVRLPSPQPNPVSNQPQF 436
Query: 400 SGYMDPYQQFRSLHPSQ---PPQFQ 465
YM+PY QF H Q PP FQ
Sbjct: 437 PAYMNPYSQFAGPHQLQQPPPPPFQ 461
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,749,908,712,651
Number of Sequences: 15229318
Number of Extensions: 4749908712651
Number of Successful Extensions: 1126793398
Number of sequences better than 0.0: 0
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