BLASTX 7.6.2

Query= UN43178 /QuerySize=629
        (628 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q9USX9|ELOC_SCHPO Elongin-C OS=Schizosaccharomyces pombe GN=e...     70   7e-012
sp|Q2KII4|ELOC_BOVIN Transcription elongation factor B polypepti...     66   1e-010
sp|Q15369|ELOC_HUMAN Transcription elongation factor B polypepti...     66   1e-010
sp|P83940|ELOC_MOUSE Transcription elongation factor B polypepti...     66   1e-010
sp|P83941|ELOC_RAT Transcription elongation factor B polypeptide...     66   1e-010
sp|Q54Q05|ELOC_DICDI Transcription elongation factor B polypepti...     57   1e-007

>sp|Q9USX9|ELOC_SCHPO Elongin-C OS=Schizosaccharomyces pombe GN=elc1 PE=2 SV=1

          Length = 97

 Score =  70 bits (171), Expect = 7e-012
 Identities = 33/74 (44%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
 Frame = +3

Query:  33 RETVKLISMEGFEFVIDKEAAMVSQTIRSMLTSPGGFSESKDGVVTFPDISTTILEKICQ 212
           +E V+LIS +GF F+++KE A +S TIR++L + G FSE++    TFPDI  T+LEK+C+
Sbjct:   3 KEYVRLISGDGFVFILEKEIACLSGTIRAIL-NEGIFSEAQKNECTFPDIRATLLEKVCE 61

Query: 213 YFYWSLQYSSKVSI 254
           Y +++ +Y +++ I
Sbjct:  62 YLHYNYRYKNQLDI 75

>sp|Q2KII4|ELOC_BOVIN Transcription elongation factor B polypeptide 1 OS=Bos
        taurus GN=TCEB1 PE=3 SV=1

          Length = 112

 Score =  66 bits (160), Expect = 1e-010
 Identities = 28/67 (41%), Positives = 48/67 (71%)
 Frame = +3

Query:  42 VKLISMEGFEFVIDKEAAMVSQTIRSMLTSPGGFSESKDGVVTFPDISTTILEKICQYFY 221
           VKLIS +G EF++ +E A+ S TI++ML+ PG F+E++   V F +I + +L K+C YF 
Sbjct:  19 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFT 78

Query: 222 WSLQYSS 242
           + ++Y++
Sbjct:  79 YKVRYTN 85

>sp|Q15369|ELOC_HUMAN Transcription elongation factor B polypeptide 1 OS=Homo
        sapiens GN=TCEB1 PE=1 SV=1

          Length = 112

 Score =  66 bits (160), Expect = 1e-010
 Identities = 28/67 (41%), Positives = 48/67 (71%)
 Frame = +3

Query:  42 VKLISMEGFEFVIDKEAAMVSQTIRSMLTSPGGFSESKDGVVTFPDISTTILEKICQYFY 221
           VKLIS +G EF++ +E A+ S TI++ML+ PG F+E++   V F +I + +L K+C YF 
Sbjct:  19 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFT 78

Query: 222 WSLQYSS 242
           + ++Y++
Sbjct:  79 YKVRYTN 85

>sp|P83940|ELOC_MOUSE Transcription elongation factor B polypeptide 1 OS=Mus
        musculus GN=Tceb1 PE=1 SV=1

          Length = 112

 Score =  66 bits (160), Expect = 1e-010
 Identities = 28/67 (41%), Positives = 48/67 (71%)
 Frame = +3

Query:  42 VKLISMEGFEFVIDKEAAMVSQTIRSMLTSPGGFSESKDGVVTFPDISTTILEKICQYFY 221
           VKLIS +G EF++ +E A+ S TI++ML+ PG F+E++   V F +I + +L K+C YF 
Sbjct:  19 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFT 78

Query: 222 WSLQYSS 242
           + ++Y++
Sbjct:  79 YKVRYTN 85

>sp|P83941|ELOC_RAT Transcription elongation factor B polypeptide 1 OS=Rattus
        norvegicus GN=Tceb1 PE=1 SV=1

          Length = 112

 Score =  66 bits (160), Expect = 1e-010
 Identities = 28/67 (41%), Positives = 48/67 (71%)
 Frame = +3

Query:  42 VKLISMEGFEFVIDKEAAMVSQTIRSMLTSPGGFSESKDGVVTFPDISTTILEKICQYFY 221
           VKLIS +G EF++ +E A+ S TI++ML+ PG F+E++   V F +I + +L K+C YF 
Sbjct:  19 VKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFT 78

Query: 222 WSLQYSS 242
           + ++Y++
Sbjct:  79 YKVRYTN 85

>sp|Q54Q05|ELOC_DICDI Transcription elongation factor B polypeptide 1
        OS=Dictyostelium discoideum GN=tceb1 PE=3 SV=1

          Length = 109

 Score =  57 bits (135), Expect = 1e-007
 Identities = 27/73 (36%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
 Frame = +3

Query:  36 ETVKLISMEGFEFVIDKEAAMVSQTIRSMLTSP-GGFSESKDGVVTFPDISTTILEKICQ 212
           + ++L S  G EFV+ ++ + VS TI+SML+     F E ++  + F +IST +LEK+ Q
Sbjct:  13 DVLRLYSSTGHEFVLSRKMSYVSGTIKSMLSGDNSNFMEDQNNEIRFREISTPVLEKVIQ 72

Query: 213 YFYWSLQYSSKVS 251
           YFY+  +Y++  +
Sbjct:  73 YFYFKNKYTNSTT 85

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,931,892,944
Number of Sequences: 518415
Number of Extensions: 164931892944
Number of Successful Extensions: 1021520109
Number of sequences better than 0.0: 0