BLASTX 7.6.2
Query= UN43200 /QuerySize=908
(907 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G13720.1 | Symbols: | LOCATED IN: chloroplast... 419 1e-117
TAIR9_protein||AT4G19390.1 | Symbols: | FUNCTIONS IN: molecular... 178 7e-045
>TAIR9_protein||AT5G13720.1 | Symbols: | LOCATED IN: chloroplast, chloroplast
inner membrane, chloroplast envelope; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Uncharacterised conserved protein UCP022348
(InterPro:IPR016804), Uncharacterised protein family UPF0114
(InterPro:IPR005134); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G19390.1); Has 294 Blast hits to 294 proteins
in 98 species: Archae - 18; Bacteria - 168; Metazoa - 0; Fungi - 0;
Plants - 53; Viruses - 0; Other Eukaryotes - 55 (source: NCBI BLink). |
chr5:4427960-4429029 FORWARD
Length = 263
Score = 419 bits (1076), Expect = 1e-117
Identities = 223/268 (83%), Positives = 239/268 (89%), Gaps = 6/268 (2%)
Frame = +1
Query: 40 ALHTLVSSTRLSVSLPYHHELPTRRRSHLTLATLASSSPPESSASSNSSSIPGANGNTLS 219
AL +L+S+T LS+S+P + LPTRRR HL LATL SSPPESSASS+ + NGNTL
Sbjct: 2 ALSSLISATPLSLSVPRYLVLPTRRRFHLPLATL-DSSPPESSASSSIPTSIPVNGNTLP 60
Query: 220 NSYGTHDKVVDDKNTLFARFFRSTESNVERIIFDFRFLALLAVGGSLAGSLLCFLNGCVY 399
+SYGT DD + FA+FFRSTESNVERIIFDFRFLALLAVGGSLAGSLLCFLNGCVY
Sbjct: 61 SSYGTRK---DD--SPFAQFFRSTESNVERIIFDFRFLALLAVGGSLAGSLLCFLNGCVY 115
Query: 400 IIEAYKVYWTNCVKGIHTGKMVLRLV*AIDVYLAGTVMLIFSMGLYGLFISNSPPDVPPE 579
I+EAYKVYWTNC KGIHTG+MVLRLV AIDVYLAGTVMLIFSMGLYGLFIS+SP DVPPE
Sbjct: 116 IVEAYKVYWTNCSKGIHTGQMVLRLVEAIDVYLAGTVMLIFSMGLYGLFISHSPHDVPPE 175
Query: 580 SDRALKASSLFGMFAMKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGL 759
SDRAL++SSLFGMFAMKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGL
Sbjct: 176 SDRALRSSSLFGMFAMKERPKWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGL 235
Query: 760 DLLSYSVCIFLSSASLYILHNLHKGEN* 843
DLLSYSVCIFLSSASLYILHNLHKGE *
Sbjct: 236 DLLSYSVCIFLSSASLYILHNLHKGET* 263
>TAIR9_protein||AT4G19390.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP022348 (InterPro:IPR016804), Uncharacterised protein family
UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G13720.1); Has 553 Blast hits to 553
proteins in 219 species: Archae - 18; Bacteria - 407; Metazoa - 0;
Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 74 (source:
NCBI BLink). | chr4:10574903-10576355 REVERSE
Length = 274
Score = 178 bits (449), Expect = 7e-045
Identities = 87/183 (47%), Positives = 124/183 (67%), Gaps = 6/183 (3%)
Frame = +1
Query: 280 FRSTESNVERIIFDFRFLALLAVGGSLAGSLLCFLNGCVYIIEAYKVYWTNCVKGIHTGK 459
F + E +E++I+ RF+ L GSL GS+LCF+ GC+Y+++++ Y ++ GK
Sbjct: 94 FEALEEGIEKVIYSCRFMTFLGTLGSLLGSVLCFIKGCMYVVDSFLQY------SVNRGK 147
Query: 460 MVLRLV*AIDVYLAGTVMLIFSMGLYGLFISNSPPDVPPESDRALKASSLFGMFAMKERP 639
++ LV AID+YL GTVML+F +GLY LFISN D SSLFGMF +KERP
Sbjct: 148 VIFLLVEAIDIYLLGTVMLVFGLGLYELFISNLDTSESRTHDIVSNRSSLFGMFTLKERP 207
Query: 640 KWMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILH 819
+W+++ S+ ELKTK+GHVIVM+LL+ +F++SK V I + DLL SV IF SSA L++L
Sbjct: 208 QWLEVKSVSELKTKLGHVIVMLLLIGLFDKSKRVVITSVTDLLCISVSIFFSSACLFLLS 267
Query: 820 NLH 828
L+
Sbjct: 268 RLN 270
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,114,567,858
Number of Sequences: 33410
Number of Extensions: 21114567858
Number of Successful Extensions: 664549188
Number of sequences better than 0.0: 0
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