BLASTX 7.6.2

Query= UN43224 /QuerySize=699
        (698 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G20580.1 | Symbols:  | small nuclear ribonucle...    247   9e-066
TAIR9_protein||AT1G76300.1 | Symbols: SmD3 | SmD3 (snRNP core pr...    208   3e-054
TAIR9_protein||AT5G27720.1 | Symbols: emb1644 | emb1644 (embryo ...     70   1e-012

>TAIR9_protein||AT1G20580.1 | Symbols:  | small nuclear ribonucleoprotein,
        putative / snRNP, putative / Sm protein, putative |
        chr1:7128979-7130371 FORWARD

          Length = 132

 Score =  247 bits (628), Expect = 9e-066
 Identities = 122/132 (92%), Positives = 125/132 (94%), Gaps = 1/132 (0%)
 Frame = +3

Query:  99 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITFTAQDGKISQL 278
           MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDIT+TA+DGK+SQL
Sbjct:   1 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITYTAKDGKVSQL 60

Query: 279 EHVFIRGSKVRFMVIPDILKHAPMFKRLDARIKGKSGSLGVGRGRAAMRGKPPA-TGRGT 455
           EHVFIRGSKVRFMVIPDILKHAPMFKRLDARIKGKS SLGVGRGR AMRGKP A  GRGT
Sbjct:  61 EHVFIRGSKVRFMVIPDILKHAPMFKRLDARIKGKSSSLGVGRGRGAMRGKPAAGPGRGT 120

Query: 456 GGRGAAPPVRR* 491
           GGRGA PPVRR*
Sbjct: 121 GGRGAVPPVRR* 132

>TAIR9_protein||AT1G76300.1 | Symbols: SmD3 | SmD3 (snRNP core protein SmD3) |
        chr1:28625957-28627080 FORWARD

          Length = 129

 Score =  208 bits (529), Expect = 3e-054
 Identities = 109/133 (81%), Positives = 119/133 (89%), Gaps = 6/133 (4%)
 Frame = +3

Query:  99 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITFTAQDGKISQL 278
           MSRSLGIPVKLLHE+SGHIV+VE+KSGELYRGSMIECEDNWNCQLE+IT+TA+DGK+SQL
Sbjct:   1 MSRSLGIPVKLLHESSGHIVSVEMKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL 60

Query: 279 EHVFIRGSKVRFMVIPDILKHAPMFKRLDARIKGKSGSLGVGRGR-AAMRGKPPATGRGT 455
           EHVFIRGS VRF+VIPD+LK+APMFK  D R KGKS SLGVGRGR AAMR K   TGRGT
Sbjct:  61 EHVFIRGSLVRFLVIPDMLKNAPMFK--DVRGKGKSASLGVGRGRGAAMRAK--GTGRGT 116

Query: 456 -GGRGAAPPVRR* 491
            GGRGA PPVRR*
Sbjct: 117 GGGRGAVPPVRR* 129

>TAIR9_protein||AT5G27720.1 | Symbols: emb1644 | emb1644 (embryo defective 1644)
        | chr5:9815904-9817304 FORWARD

          Length = 130

 Score =  70 bits (169), Expect = 1e-012
 Identities = 41/125 (32%), Positives = 65/125 (52%), Gaps = 9/125 (7%)
 Frame = +3

Query: 117 IPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLEDITFTAQDG-KISQLEHVFI 293
           +P+ LL  A GH + VELK+GE Y G ++ C+   N  L ++  T++DG +  ++   +I
Sbjct:   2 LPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYI 61

Query: 294 RGSKVRFMVIPDILKHAPMFKRLDARIKGKSGSLGVGRGRAAMRGKPPATGRGT------ 455
           RG+ ++++ +PD  +     +    R   K   +G GRGR    G     GRGT      
Sbjct:  62 RGNTIKYLRVPD--EVIDKVQEEKTRTDRKPPGVGRGRGRGVDDGGARGRGRGTSMGKMG 119

Query: 456 GGRGA 470
           G RGA
Sbjct: 120 GNRGA 124

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,114,567,858
Number of Sequences: 33410
Number of Extensions: 21114567858
Number of Successful Extensions: 664549188
Number of sequences better than 0.0: 0