BLASTX 7.6.2
Query= UN43303 /QuerySize=952
(951 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15232179|ref|NP_191540.1| U6 snRNA-associated Sm-like protein... 158 2e-036
gi|21554327|gb|AAM63434.1| U6 snRNA-associated Sm-like protein [... 154 2e-035
gi|297817284|ref|XP_002876525.1| hypothetical protein ARALYDRAFT... 154 2e-035
gi|297824373|ref|XP_002880069.1| hypothetical protein ARALYDRAFT... 151 3e-034
gi|15224366|ref|NP_181909.1| U6 snRNA-associated Sm-like protein... 148 1e-033
gi|255587821|ref|XP_002534408.1| small nuclear ribonucleoprotein... 148 2e-033
gi|255627589|gb|ACU14139.1| unknown [Glycine max] 148 2e-033
gi|326504448|dbj|BAJ91056.1| predicted protein [Hordeum vulgare ... 148 2e-033
gi|224098796|ref|XP_002311269.1| predicted protein [Populus tric... 147 4e-033
gi|222424888|dbj|BAH20395.1| AT2G43810 [Arabidopsis thaliana] 146 5e-033
gi|224112373|ref|XP_002316168.1| predicted protein [Populus tric... 146 6e-033
gi|212722680|ref|NP_001131392.1| hypothetical protein LOC1001927... 146 8e-033
gi|225434160|ref|XP_002278412.1| PREDICTED: hypothetical protein... 145 1e-032
gi|48716974|dbj|BAD23667.1| putative Sm protein F [Oryza sativa ... 145 1e-032
gi|115446301|ref|NP_001046930.1| Os02g0510100 [Oryza sativa Japo... 145 1e-032
gi|218190824|gb|EEC73251.1| hypothetical protein OsI_07364 [Oryz... 145 1e-032
gi|242075544|ref|XP_002447708.1| hypothetical protein SORBIDRAFT... 145 1e-032
gi|115458068|ref|NP_001052634.1| Os04g0388900 [Oryza sativa Japo... 142 9e-032
gi|168005297|ref|XP_001755347.1| predicted protein [Physcomitrel... 141 3e-031
gi|116782342|gb|ABK22473.1| unknown [Picea sitchensis] 140 4e-031
>gi|15232179|ref|NP_191540.1| U6 snRNA-associated Sm-like protein LSm6
[Arabidopsis thaliana]
Length = 91
Score = 158 bits (397), Expect = 2e-036
Identities = 78/89 (87%), Positives = 82/89 (92%)
Frame = -3
Query: 826 GVEIIVSGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQ 647
GVE VSGTTKTP+DFLKSIRGRPVV+KLNSGVDYRG LTCLDGYMNIAMEQTEEYVN Q
Sbjct: 3 GVEEKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGTLTCLDGYMNIAMEQTEEYVNGQ 62
Query: 646 LKSKYGDAFIRGNNVLYISTVNTPLPDGA 560
LK+KYGDAFIRGNNVLYISTVN + DGA
Sbjct: 63 LKNKYGDAFIRGNNVLYISTVNMTVADGA 91
>gi|21554327|gb|AAM63434.1| U6 snRNA-associated Sm-like protein [Arabidopsis
thaliana]
Length = 91
Score = 154 bits (389), Expect = 2e-035
Identities = 76/89 (85%), Positives = 81/89 (91%)
Frame = -3
Query: 826 GVEIIVSGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQ 647
GV VSGTTKTP+DFLKSIRGRPV++KLNSGVDYRG LTCLDGYMNIAMEQTEEYVN Q
Sbjct: 3 GVGEKVSGTTKTPADFLKSIRGRPVIVKLNSGVDYRGTLTCLDGYMNIAMEQTEEYVNGQ 62
Query: 646 LKSKYGDAFIRGNNVLYISTVNTPLPDGA 560
LK+KYGDAFIRGNNVLYISTVN + DGA
Sbjct: 63 LKNKYGDAFIRGNNVLYISTVNMTVADGA 91
>gi|297817284|ref|XP_002876525.1| hypothetical protein ARALYDRAFT_486445
[Arabidopsis lyrata subsp. lyrata]
Length = 91
Score = 154 bits (389), Expect = 2e-035
Identities = 77/89 (86%), Positives = 81/89 (91%)
Frame = -3
Query: 826 GVEIIVSGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQ 647
GV VSGTTKTP+DFLKSIRGRPVV+KLNSGVDYRGILTCLDGYMNIAMEQTEEYVN Q
Sbjct: 3 GVGEKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNGQ 62
Query: 646 LKSKYGDAFIRGNNVLYISTVNTPLPDGA 560
LK+KYGDAFIRGNNVLYISTV + DGA
Sbjct: 63 LKNKYGDAFIRGNNVLYISTVKMTVADGA 91
>gi|297824373|ref|XP_002880069.1| hypothetical protein ARALYDRAFT_903785
[Arabidopsis lyrata subsp. lyrata]
Length = 91
Score = 151 bits (379), Expect = 3e-034
Identities = 74/89 (83%), Positives = 79/89 (88%)
Frame = -3
Query: 826 GVEIIVSGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQ 647
GV SGTTKTP+DFLKSIRG+PVV+KLNSGVDYRGILTCLDGYMNIAMEQTEEYVN Q
Sbjct: 3 GVGEKASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNGQ 62
Query: 646 LKSKYGDAFIRGNNVLYISTVNTPLPDGA 560
LK+KYGDAF+RGNNVLYIST L DGA
Sbjct: 63 LKNKYGDAFVRGNNVLYISTTKGTLSDGA 91
>gi|15224366|ref|NP_181909.1| U6 snRNA-associated Sm-like protein LSm6
[Arabidopsis thaliana]
Length = 91
Score = 148 bits (373), Expect = 1e-033
Identities = 73/89 (82%), Positives = 78/89 (87%)
Frame = -3
Query: 826 GVEIIVSGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQ 647
GV SGTTKTP+DFLKSIRG+PVV+KLNSGVDYRGILTCLDGYMNIAMEQTEEYVN Q
Sbjct: 3 GVGEKASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNGQ 62
Query: 646 LKSKYGDAFIRGNNVLYISTVNTPLPDGA 560
LK+ YGDAF+RGNNVLYIST L DGA
Sbjct: 63 LKNTYGDAFVRGNNVLYISTTKGTLSDGA 91
>gi|255587821|ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative
[Ricinus communis]
Length = 91
Score = 148 bits (371), Expect = 2e-033
Identities = 72/83 (86%), Positives = 75/83 (90%)
Frame = -3
Query: 808 SGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYG 629
S TTKTP+DFLKSIRGRPVV+KLNSGVDYRGIL CLDGYMNIAMEQTEEYVN QLK+KYG
Sbjct: 9 SATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYG 68
Query: 628 DAFIRGNNVLYISTVNTPLPDGA 560
DAFIRGNNVLYIST L DGA
Sbjct: 69 DAFIRGNNVLYISTTKRTLADGA 91
>gi|255627589|gb|ACU14139.1| unknown [Glycine max]
Length = 91
Score = 148 bits (371), Expect = 2e-033
Identities = 72/83 (86%), Positives = 76/83 (91%)
Frame = -3
Query: 808 SGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYG 629
SGTTKTP+DFLKSIRGRPVV+KLNSGVDYRGIL CLDGYMNIAMEQTEEYVN QLK+KYG
Sbjct: 9 SGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYG 68
Query: 628 DAFIRGNNVLYISTVNTPLPDGA 560
DAFIRGNNVLYIST L +GA
Sbjct: 69 DAFIRGNNVLYISTSKRTLAEGA 91
>gi|326504448|dbj|BAJ91056.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 99
Score = 148 bits (371), Expect = 2e-033
Identities = 72/82 (87%), Positives = 74/82 (90%)
Frame = -3
Query: 805 GTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGD 626
G KTPSDFLKSIRGRPVV+KLNSGVDYRGIL CLDGYMNIAMEQTEEYVN QLK+KYGD
Sbjct: 18 GPVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 77
Query: 625 AFIRGNNVLYISTVNTPLPDGA 560
AFIRGNNVLYIST PL DGA
Sbjct: 78 AFIRGNNVLYISTSKRPLTDGA 99
>gi|224098796|ref|XP_002311269.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 147 bits (369), Expect = 4e-033
Identities = 72/83 (86%), Positives = 75/83 (90%)
Frame = -3
Query: 808 SGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYG 629
S TTKTP+DFLKSIRGRPVV+KLNSGVDYRGIL CLDGYMNIAMEQTEEYVN QLK+KYG
Sbjct: 9 SATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYG 68
Query: 628 DAFIRGNNVLYISTVNTPLPDGA 560
DAFIRGNNVLYIST L DGA
Sbjct: 69 DAFIRGNNVLYISTSKRTLADGA 91
>gi|222424888|dbj|BAH20395.1| AT2G43810 [Arabidopsis thaliana]
Length = 91
Score = 146 bits (368), Expect = 5e-033
Identities = 72/89 (80%), Positives = 77/89 (86%)
Frame = -3
Query: 826 GVEIIVSGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQ 647
GV SGTTKTP+DFLKSIRG+PVV+KLNSGVDYRGILTCLDGYMNIAMEQ EEYVN Q
Sbjct: 3 GVGEKASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQAEEYVNGQ 62
Query: 646 LKSKYGDAFIRGNNVLYISTVNTPLPDGA 560
LK+ YGDAF+RGNNVLYIST L DGA
Sbjct: 63 LKNTYGDAFVRGNNVLYISTTKGTLSDGA 91
>gi|224112373|ref|XP_002316168.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 146 bits (367), Expect = 6e-033
Identities = 72/83 (86%), Positives = 75/83 (90%)
Frame = -3
Query: 808 SGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYG 629
S TTKTP+DFLKSIRGRPVV+KLNSGVDYRGIL CLDGYMNIAMEQTEEYVN QLK+KYG
Sbjct: 9 STTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYG 68
Query: 628 DAFIRGNNVLYISTVNTPLPDGA 560
DAFIRGNNVLYIST L DGA
Sbjct: 69 DAFIRGNNVLYISTSKRTLADGA 91
>gi|212722680|ref|NP_001131392.1| hypothetical protein LOC100192719 [Zea mays]
Length = 95
Score = 146 bits (366), Expect = 8e-033
Identities = 71/82 (86%), Positives = 73/82 (89%)
Frame = -3
Query: 805 GTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGD 626
G KTPSDFLKSIRGRPVV+KLNSGVDYRGIL CLDGYMNIAMEQTEEYVN QLK+KYGD
Sbjct: 14 GAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 73
Query: 625 AFIRGNNVLYISTVNTPLPDGA 560
AFIRGNNVLYIST L DGA
Sbjct: 74 AFIRGNNVLYISTTKRTLADGA 95
>gi|225434160|ref|XP_002278412.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 91
Score = 145 bits (365), Expect = 1e-032
Identities = 71/83 (85%), Positives = 75/83 (90%)
Frame = -3
Query: 808 SGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYG 629
S TTKTP+DFLKSIRGRPVV+KLNSGVDYRGIL CLDGYMNIAMEQTEEYVN QLK+KYG
Sbjct: 9 SATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYG 68
Query: 628 DAFIRGNNVLYISTVNTPLPDGA 560
DAFIRGNNVLYIST L +GA
Sbjct: 69 DAFIRGNNVLYISTSKRTLAEGA 91
>gi|48716974|dbj|BAD23667.1| putative Sm protein F [Oryza sativa Japonica
Group]
Length = 101
Score = 145 bits (364), Expect = 1e-032
Identities = 71/82 (86%), Positives = 73/82 (89%)
Frame = -3
Query: 805 GTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGD 626
G KTPSDFLKSIRGRPVV+KLNSGVDYRGIL CLDGYMNIAMEQTEEYVN QLK+KYGD
Sbjct: 20 GAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 79
Query: 625 AFIRGNNVLYISTVNTPLPDGA 560
AFIRGNNVLYIST L DGA
Sbjct: 80 AFIRGNNVLYISTSKRTLTDGA 101
>gi|115446301|ref|NP_001046930.1| Os02g0510100 [Oryza sativa Japonica Group]
Length = 96
Score = 145 bits (364), Expect = 1e-032
Identities = 71/82 (86%), Positives = 73/82 (89%)
Frame = -3
Query: 805 GTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGD 626
G KTPSDFLKSIRGRPVV+KLNSGVDYRGIL CLDGYMNIAMEQTEEYVN QLK+KYGD
Sbjct: 15 GAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 74
Query: 625 AFIRGNNVLYISTVNTPLPDGA 560
AFIRGNNVLYIST L DGA
Sbjct: 75 AFIRGNNVLYISTSKRTLTDGA 96
>gi|218190824|gb|EEC73251.1| hypothetical protein OsI_07364 [Oryza sativa Indica
Group]
Length = 97
Score = 145 bits (364), Expect = 1e-032
Identities = 71/82 (86%), Positives = 73/82 (89%)
Frame = -3
Query: 805 GTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGD 626
G KTPSDFLKSIRGRPVV+KLNSGVDYRGIL CLDGYMNIAMEQTEEYVN QLK+KYGD
Sbjct: 16 GAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 75
Query: 625 AFIRGNNVLYISTVNTPLPDGA 560
AFIRGNNVLYIST L DGA
Sbjct: 76 AFIRGNNVLYISTSKRTLTDGA 97
>gi|242075544|ref|XP_002447708.1| hypothetical protein SORBIDRAFT_06g013920
[Sorghum bicolor]
Length = 97
Score = 145 bits (364), Expect = 1e-032
Identities = 71/82 (86%), Positives = 73/82 (89%)
Frame = -3
Query: 805 GTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGD 626
G KTPSDFLKSIRGRPVV+KLNSGVDYRGIL CLDGYMNIAMEQTEEYVN QLK+KYGD
Sbjct: 16 GAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 75
Query: 625 AFIRGNNVLYISTVNTPLPDGA 560
AFIRGNNVLYIST L DGA
Sbjct: 76 AFIRGNNVLYISTSKRTLTDGA 97
>gi|115458068|ref|NP_001052634.1| Os04g0388900 [Oryza sativa Japonica Group]
Length = 97
Score = 142 bits (357), Expect = 9e-032
Identities = 70/82 (85%), Positives = 72/82 (87%)
Frame = -3
Query: 805 GTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGD 626
G KTPSDFLKSIRGRPVV+KLNSGVDYRGIL CLDGYMNIAMEQTEEYVN QLK+KYGD
Sbjct: 16 GAVKTPSDFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGD 75
Query: 625 AFIRGNNVLYISTVNTPLPDGA 560
AFIRGNNVLYIST L D A
Sbjct: 76 AFIRGNNVLYISTSKRTLTDDA 97
>gi|168005297|ref|XP_001755347.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 91
Score = 141 bits (353), Expect = 3e-031
Identities = 67/81 (82%), Positives = 73/81 (90%)
Frame = -3
Query: 808 SGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYG 629
+G+ KTP+DFLKSIRGRPVV+KLNSGVDYRG+L CLDGYMNIAMEQTEEYVN QLK+KYG
Sbjct: 11 TGSAKTPADFLKSIRGRPVVVKLNSGVDYRGVLACLDGYMNIAMEQTEEYVNGQLKNKYG 70
Query: 628 DAFIRGNNVLYISTVNTPLPD 566
DAFIRGNNVLYIST L D
Sbjct: 71 DAFIRGNNVLYISTTKRTLGD 91
>gi|116782342|gb|ABK22473.1| unknown [Picea sitchensis]
Length = 91
Score = 140 bits (351), Expect = 4e-031
Identities = 68/81 (83%), Positives = 73/81 (90%)
Frame = -3
Query: 802 TTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGDA 623
+ KTP+DFLKSIRGRPVV+KLNSGVDYRGIL CLDGYMNIAMEQTEEYVN QLK+KYGDA
Sbjct: 11 SAKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNGQLKNKYGDA 70
Query: 622 FIRGNNVLYISTVNTPLPDGA 560
FIRGNNVLYIST L +GA
Sbjct: 71 FIRGNNVLYISTSKRSLGEGA 91
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,749,908,712,651
Number of Sequences: 15229318
Number of Extensions: 4749908712651
Number of Successful Extensions: 1126793398
Number of sequences better than 0.0: 0
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