BLASTX 7.6.2
Query= UN43303 /QuerySize=952
(951 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P62312|LSM6_HUMAN U6 snRNA-associated Sm-like protein LSm6 OS... 129 4e-029
sp|P62313|LSM6_MOUSE U6 snRNA-associated Sm-like protein LSm6 OS... 129 4e-029
sp|A8NHT8|LSM6_COPC7 U6 snRNA-associated Sm-like protein LSm6 OS... 107 1e-022
sp|B0DWN3|LSM6_LACBS U6 snRNA-associated Sm-like protein LSm6 OS... 107 1e-022
sp|Q4PG71|LSM6_USTMA U6 snRNA-associated Sm-like protein LSm6 OS... 102 6e-021
sp|Q9UUI1|LSM6_SCHPO U6 snRNA-associated Sm-like protein LSm6 OS... 101 1e-020
sp|Q552U1|LSM6_DICDI Probable U6 snRNA-associated Sm-like protei... 101 1e-020
sp|A6R363|LSM6_AJECN U6 snRNA-associated Sm-like protein LSm6 OS... 97 2e-019
sp|Q2HAN0|LSM6_CHAGB U6 snRNA-associated Sm-like protein LSm6 OS... 96 3e-019
sp|Q4WNI0|LSM6_ASPFU U6 snRNA-associated Sm-like protein LSm6 OS... 93 3e-018
sp|A1DM27|LSM6_NEOFI U6 snRNA-associated Sm-like protein LSm6 OS... 93 3e-018
sp|A7UXE4|LSM6_NEUCR U6 snRNA-associated Sm-like protein LSm6 OS... 92 4e-018
sp|Q5K712|LSM6_CRYNE U6 snRNA-associated Sm-like protein LSm6 OS... 92 5e-018
sp|A1CE19|LSM6_ASPCL U6 snRNA-associated Sm-like protein LSm6 OS... 91 8e-018
sp|Q1DRN0|LSM6_COCIM U6 snRNA-associated Sm-like protein LSm6 OS... 91 1e-017
sp|A4RQ29|LSM6_MAGGR U6 snRNA-associated Sm-like protein LSm6 OS... 87 2e-016
sp|Q0UWI9|LSM6_PHANO U6 snRNA-associated Sm-like protein LSm6 OS... 83 3e-015
sp|A6S5C9|LSM6_BOTFB U6 snRNA-associated Sm-like protein LSm6 OS... 82 6e-015
sp|A7F5M4|LSM6_SCLS1 U6 snRNA-associated Sm-like protein LSm6 OS... 81 8e-015
sp|Q6BR90|LSM6_DEBHA U6 snRNA-associated Sm-like protein LSm6 OS... 78 9e-014
>sp|P62312|LSM6_HUMAN U6 snRNA-associated Sm-like protein LSm6 OS=Homo sapiens
GN=LSM6 PE=1 SV=1
Length = 80
Score = 129 bits (323), Expect = 4e-029
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = -3
Query: 796 KTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGDAFI 617
+TPSDFLK I GRPVV+KLNSGVDYRG+L CLDGYMNIA+EQTEEYVN QLK+KYGDAFI
Sbjct: 6 QTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFI 65
Query: 616 RGNNVLYIST 587
RGNNVLYIST
Sbjct: 66 RGNNVLYIST 75
>sp|P62313|LSM6_MOUSE U6 snRNA-associated Sm-like protein LSm6 OS=Mus musculus
GN=Lsm6 PE=2 SV=1
Length = 80
Score = 129 bits (323), Expect = 4e-029
Identities = 61/70 (87%), Positives = 66/70 (94%)
Frame = -3
Query: 796 KTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGDAFI 617
+TPSDFLK I GRPVV+KLNSGVDYRG+L CLDGYMNIA+EQTEEYVN QLK+KYGDAFI
Sbjct: 6 QTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIALEQTEEYVNGQLKNKYGDAFI 65
Query: 616 RGNNVLYIST 587
RGNNVLYIST
Sbjct: 66 RGNNVLYIST 75
>sp|A8NHT8|LSM6_COPC7 U6 snRNA-associated Sm-like protein LSm6 OS=Coprinopsis
cinerea (strain Okayama-7 / 130 / FGSC 9003) GN=LSM6 PE=3 SV=2
Length = 95
Score = 107 bits (267), Expect = 1e-022
Identities = 51/70 (72%), Positives = 62/70 (88%)
Frame = -3
Query: 799 TKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGDAF 620
T +P+DFLK + G+ VV++L SGVDYRGIL+CLDGYMNIAMEQTEE VN ++ ++YGDAF
Sbjct: 21 TGSPTDFLKGVVGKRVVVRLLSGVDYRGILSCLDGYMNIAMEQTEESVNGKVVNRYGDAF 80
Query: 619 IRGNNVLYIS 590
IRGNNVLYIS
Sbjct: 81 IRGNNVLYIS 90
>sp|B0DWN3|LSM6_LACBS U6 snRNA-associated Sm-like protein LSm6 OS=Laccaria
bicolor (strain S238N-H82) GN=LSM6 PE=3 SV=1
Length = 99
Score = 107 bits (266), Expect = 1e-022
Identities = 48/70 (68%), Positives = 62/70 (88%)
Frame = -3
Query: 799 TKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGDAF 620
T +P+DFLK + G+ V+++L SGVDYRG+L+CLDGYMNIA+EQTEE+VN + ++YGDAF
Sbjct: 25 TGSPTDFLKGVVGKRVIVRLTSGVDYRGLLSCLDGYMNIALEQTEEHVNGVVTNRYGDAF 84
Query: 619 IRGNNVLYIS 590
IRGNNVLYIS
Sbjct: 85 IRGNNVLYIS 94
>sp|Q4PG71|LSM6_USTMA U6 snRNA-associated Sm-like protein LSm6 OS=Ustilago
maydis GN=LSM6 PE=3 SV=2
Length = 85
Score = 102 bits (252), Expect = 6e-021
Identities = 45/70 (64%), Positives = 60/70 (85%)
Frame = -3
Query: 793 TPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGDAFIR 614
+P+DFLK + G+ V ++LNSG+DYRG+L+CLDGYMNIA+EQT EYV+ K+ YGDAFIR
Sbjct: 14 SPNDFLKGVIGKNVNVRLNSGIDYRGVLSCLDGYMNIALEQTVEYVDGIKKNSYGDAFIR 73
Query: 613 GNNVLYISTV 584
GNNV+YI+ +
Sbjct: 74 GNNVMYITAL 83
>sp|Q9UUI1|LSM6_SCHPO U6 snRNA-associated Sm-like protein LSm6
OS=Schizosaccharomyces pombe GN=lsm6 PE=2 SV=1
Length = 75
Score = 101 bits (250), Expect = 1e-020
Identities = 43/71 (60%), Positives = 62/71 (87%)
Frame = -3
Query: 793 TPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGDAFIR 614
+P++FL + G+ V+++L+SGVDY+GIL+CLDGYMN+A+E+TEEYVN + + YGDAFIR
Sbjct: 4 SPNEFLNKVIGKKVLIRLSSGVDYKGILSCLDGYMNLALERTEEYVNGKKTNVYGDAFIR 63
Query: 613 GNNVLYISTVN 581
GNNVLY+S ++
Sbjct: 64 GNNVLYVSALD 74
>sp|Q552U1|LSM6_DICDI Probable U6 snRNA-associated Sm-like protein LSm6
OS=Dictyostelium discoideum GN=lsm6 PE=3 SV=1
Length = 88
Score = 101 bits (249), Expect = 1e-020
Identities = 48/73 (65%), Positives = 57/73 (78%)
Frame = -3
Query: 808 SGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYG 629
S + +F K GRPVV+KLN+GV+YRGIL +DG MNI MEQTEEY+N QLK+KYG
Sbjct: 11 SNNSNAQFNFFKMCIGRPVVVKLNNGVEYRGILEVVDGNMNIVMEQTEEYLNGQLKTKYG 70
Query: 628 DAFIRGNNVLYIS 590
D F+RGNNVLYIS
Sbjct: 71 DCFLRGNNVLYIS 83
>sp|A6R363|LSM6_AJECN U6 snRNA-associated Sm-like protein LSm6 OS=Ajellomyces
capsulata (strain NAm1 / WU24) GN=LSM6 PE=3 SV=1
Length = 80
Score = 97 bits (239), Expect = 2e-019
Identities = 46/69 (66%), Positives = 55/69 (79%)
Frame = -3
Query: 796 KTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGDAFI 617
K PS FL I G PV +KLNSGV Y+G L +DGYMNIA+E+TEEYV+ +L+ YGDAF+
Sbjct: 10 KDPSAFLSEITGAPVTVKLNSGVVYKGELQSVDGYMNIALEKTEEYVDGKLRRSYGDAFV 69
Query: 616 RGNNVLYIS 590
RGNNVLYIS
Sbjct: 70 RGNNVLYIS 78
>sp|Q2HAN0|LSM6_CHAGB U6 snRNA-associated Sm-like protein LSm6 OS=Chaetomium
globosum GN=LSM6 PE=3 SV=2
Length = 82
Score = 96 bits (237), Expect = 3e-019
Identities = 46/72 (63%), Positives = 54/72 (75%)
Frame = -3
Query: 805 GTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGD 626
G K PS FL I G PV +KLNSGV Y+G L +DGYMNIA+E+TEEYVN + YGD
Sbjct: 9 GEGKDPSGFLSEIIGNPVTVKLNSGVVYKGELQSVDGYMNIALEKTEEYVNGAKRRSYGD 68
Query: 625 AFIRGNNVLYIS 590
AF+RGNNV+YIS
Sbjct: 69 AFVRGNNVMYIS 80
>sp|Q4WNI0|LSM6_ASPFU U6 snRNA-associated Sm-like protein LSm6 OS=Aspergillus
fumigatus GN=lsm6 PE=3 SV=2
Length = 80
Score = 93 bits (229), Expect = 3e-018
Identities = 46/73 (63%), Positives = 56/73 (76%)
Frame = -3
Query: 808 SGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYG 629
S + PS FL I G PV +KLNSGV Y+G L +DGYMNIA+E++EE+V+ +LK YG
Sbjct: 6 SSEGRDPSAFLGEIIGAPVTVKLNSGVVYKGELQSVDGYMNIALERSEEFVDGKLKRSYG 65
Query: 628 DAFIRGNNVLYIS 590
DAFIRGNNVLYIS
Sbjct: 66 DAFIRGNNVLYIS 78
>sp|A1DM27|LSM6_NEOFI U6 snRNA-associated Sm-like protein LSm6 OS=Neosartorya
fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=lsm6
PE=3 SV=2
Length = 80
Score = 93 bits (229), Expect = 3e-018
Identities = 46/73 (63%), Positives = 56/73 (76%)
Frame = -3
Query: 808 SGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYG 629
S + PS FL I G PV +KLNSGV YRG L +DGYMNIA+E++EE+V+ +L+ YG
Sbjct: 6 SSEGRDPSAFLGEIIGAPVTVKLNSGVVYRGELQSVDGYMNIALERSEEFVDGKLRRSYG 65
Query: 628 DAFIRGNNVLYIS 590
DAFIRGNNVLYIS
Sbjct: 66 DAFIRGNNVLYIS 78
>sp|A7UXE4|LSM6_NEUCR U6 snRNA-associated Sm-like protein LSm6 OS=Neurospora
crassa GN=lsm-6 PE=3 SV=2
Length = 82
Score = 92 bits (228), Expect = 4e-018
Identities = 43/69 (62%), Positives = 53/69 (76%)
Frame = -3
Query: 796 KTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGDAFI 617
K PS FL I G PV +KLNSGV Y+G L +DGYMNIA+E+TEE++N + YGDAF+
Sbjct: 12 KDPSGFLSEIIGNPVTVKLNSGVVYKGELQSVDGYMNIALEKTEEFINGVKRRSYGDAFV 71
Query: 616 RGNNVLYIS 590
RGNNV+YIS
Sbjct: 72 RGNNVMYIS 80
>sp|Q5K712|LSM6_CRYNE U6 snRNA-associated Sm-like protein LSm6 OS=Cryptococcus
neoformans GN=LSM6 PE=3 SV=1
Length = 88
Score = 92 bits (227), Expect = 5e-018
Identities = 40/70 (57%), Positives = 55/70 (78%)
Frame = -3
Query: 793 TPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGDAFIR 614
+PS+FL++I G+ V +++ SGVDY G+LTCLDGYMN+A+EQ EE+ + YGD F+R
Sbjct: 16 SPSEFLRNIVGKRVKVRIGSGVDYTGLLTCLDGYMNVALEQAEEWAGEVKTAAYGDCFLR 75
Query: 613 GNNVLYISTV 584
GNNVLYIS +
Sbjct: 76 GNNVLYISAL 85
>sp|A1CE19|LSM6_ASPCL U6 snRNA-associated Sm-like protein LSm6 OS=Aspergillus
clavatus GN=lsm6 PE=3 SV=2
Length = 78
Score = 91 bits (225), Expect = 8e-018
Identities = 43/74 (58%), Positives = 57/74 (77%)
Frame = -3
Query: 811 VSGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKY 632
+S + PS FL I G PV +KLNSGV Y+G L +DGYMNIA+EQ++E+++ +L+ Y
Sbjct: 4 ISSEGRDPSAFLSEIIGAPVTVKLNSGVVYKGELQSVDGYMNIALEQSKEFMDGKLRRSY 63
Query: 631 GDAFIRGNNVLYIS 590
GDAFIRGNNVLYI+
Sbjct: 64 GDAFIRGNNVLYIA 77
>sp|Q1DRN0|LSM6_COCIM U6 snRNA-associated Sm-like protein LSm6 OS=Coccidioides
immitis GN=LSM6 PE=3 SV=1
Length = 80
Score = 91 bits (224), Expect = 1e-017
Identities = 42/70 (60%), Positives = 54/70 (77%)
Frame = -3
Query: 799 TKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGDAF 620
++ PS FL I G V +KLNSGV Y+G L +DGYMNIA+E+T+E+VN +L+ YGD F
Sbjct: 9 SQDPSAFLSGITGASVTVKLNSGVVYKGELQSIDGYMNIALEKTQEFVNGKLRKSYGDVF 68
Query: 619 IRGNNVLYIS 590
+RGNNVLYIS
Sbjct: 69 VRGNNVLYIS 78
>sp|A4RQ29|LSM6_MAGGR U6 snRNA-associated Sm-like protein LSm6 OS=Magnaporthe
grisea GN=LSM6 PE=3 SV=1
Length = 83
Score = 87 bits (213), Expect = 2e-016
Identities = 42/75 (56%), Positives = 53/75 (70%)
Frame = -3
Query: 814 IVSGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSK 635
+ G K P+ FL I G V +KLNSGV Y+G L +DGYMNIA+E+ EE+V Q K
Sbjct: 6 MTQGEGKDPTSFLGEIIGNMVTVKLNSGVIYKGELQSVDGYMNIALEKAEEWVAGQKKRS 65
Query: 634 YGDAFIRGNNVLYIS 590
YGDAF+RGNNV+YI+
Sbjct: 66 YGDAFVRGNNVMYIA 80
>sp|Q0UWI9|LSM6_PHANO U6 snRNA-associated Sm-like protein LSm6 OS=Phaeosphaeria
nodorum GN=LSM6 PE=3 SV=2
Length = 89
Score = 83 bits (203), Expect = 3e-015
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = -3
Query: 808 SGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYG 629
+G ++ PS FL I G PV +KLNSG+ Y+G L +DGYMNIA+E+ +E ++ +G
Sbjct: 13 AGDSRDPSGFLSEIIGAPVTVKLNSGIVYKGDLQSVDGYMNIALERCKEVAEGRVIRNWG 72
Query: 628 DAFIRGNNVLYISTVN 581
DAF+RGNNV YIS N
Sbjct: 73 DAFVRGNNVTYISADN 88
>sp|A6S5C9|LSM6_BOTFB U6 snRNA-associated Sm-like protein LSm6 OS=Botryotinia
fuckeliana (strain B05.10) GN=lsm6 PE=3 SV=2
Length = 85
Score = 82 bits (200), Expect = 6e-015
Identities = 38/72 (52%), Positives = 54/72 (75%)
Frame = -3
Query: 805 GTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGD 626
G K PS FL I G V++KLN+ + ++G L +DGYMNIA+E+ EE+V+ + K+ +GD
Sbjct: 9 GEGKDPSSFLSEIIGSKVIVKLNNSLVFKGELQSVDGYMNIALEKCEEWVHGKKKTVHGD 68
Query: 625 AFIRGNNVLYIS 590
AF+RGNNV+YIS
Sbjct: 69 AFVRGNNVMYIS 80
>sp|A7F5M4|LSM6_SCLS1 U6 snRNA-associated Sm-like protein LSm6 OS=Sclerotinia
sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=lsm6 PE=3 SV=2
Length = 85
Score = 81 bits (199), Expect = 8e-015
Identities = 38/72 (52%), Positives = 54/72 (75%)
Frame = -3
Query: 805 GTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGD 626
G K PS FL I G V++KLN+ + ++G L +DGYMNIA+E+ EE+V+ + K+ +GD
Sbjct: 9 GEGKDPSSFLSDIIGSRVIVKLNNSLVFKGELQSVDGYMNIALEKCEEWVHGKKKTVHGD 68
Query: 625 AFIRGNNVLYIS 590
AF+RGNNV+YIS
Sbjct: 69 AFVRGNNVMYIS 80
>sp|Q6BR90|LSM6_DEBHA U6 snRNA-associated Sm-like protein LSm6 OS=Debaryomyces
hansenii GN=LSM6 PE=3 SV=2
Length = 85
Score = 78 bits (190), Expect = 9e-014
Identities = 39/74 (52%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = -3
Query: 808 SGTTKT-PSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKY 632
SG+ T PS FL I G V ++L++GV+Y G L +DGYMNI +++T+E+V Y
Sbjct: 10 SGSENTGPSVFLSEIIGSSVTVRLHNGVEYLGNLQSIDGYMNIVLDETKEFVGGDQARNY 69
Query: 631 GDAFIRGNNVLYIS 590
GD FIRGNNVLYIS
Sbjct: 70 GDVFIRGNNVLYIS 83
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,931,892,944
Number of Sequences: 518415
Number of Extensions: 164931892944
Number of Successful Extensions: 1021520109
Number of sequences better than 0.0: 0
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