BLASTX 7.6.2

Query= UN43303 /QuerySize=952
        (951 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G59810.1 | Symbols:  | small nuclear ribonucle...    158   6e-039
TAIR9_protein||AT2G43810.1 | Symbols:  | small nuclear ribonucle...    149   4e-036
TAIR9_protein||AT2G43810.2 | Symbols:  | small nuclear ribonucle...    149   4e-036
TAIR9_protein||AT4G30220.1 | Symbols: RUXF | RUXF (SMALL NUCLEAR...     69   4e-012
TAIR9_protein||AT2G14285.1 | Symbols:  | FUNCTIONS IN: molecular...     52   6e-007

>TAIR9_protein||AT3G59810.1 | Symbols:  | small nuclear ribonucleoprotein F,
        putative / U6 snRNA-associated Sm-like protein, putative / Sm protein
        F, putative | chr3:22096841-22097666 FORWARD

          Length = 92

 Score =  158 bits (398), Expect = 6e-039
 Identities = 78/90 (86%), Positives = 82/90 (91%)
 Frame = -3

Query: 826 GVEIIVSGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQ 647
           GVE  VSGTTKTP+DFLKSIRGRPVV+KLNSGVDYRG LTCLDGYMNIAMEQTEEYVN Q
Sbjct:   3 GVEEKVSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGTLTCLDGYMNIAMEQTEEYVNGQ 62

Query: 646 LKSKYGDAFIRGNNVLYISTVNTPLPDGA* 557
           LK+KYGDAFIRGNNVLYISTVN  + DGA*
Sbjct:  63 LKNKYGDAFIRGNNVLYISTVNMTVADGA* 92

>TAIR9_protein||AT2G43810.1 | Symbols:  | small nuclear ribonucleoprotein F,
        putative / U6 snRNA-associated Sm-like protein, putative / Sm protein
        F, putative | chr2:18149725-18150879 FORWARD

          Length = 92

 Score =  149 bits (374), Expect = 4e-036
 Identities = 73/90 (81%), Positives = 78/90 (86%)
 Frame = -3

Query: 826 GVEIIVSGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQ 647
           GV    SGTTKTP+DFLKSIRG+PVV+KLNSGVDYRGILTCLDGYMNIAMEQTEEYVN Q
Sbjct:   3 GVGEKASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNGQ 62

Query: 646 LKSKYGDAFIRGNNVLYISTVNTPLPDGA* 557
           LK+ YGDAF+RGNNVLYIST    L DGA*
Sbjct:  63 LKNTYGDAFVRGNNVLYISTTKGTLSDGA* 92

>TAIR9_protein||AT2G43810.2 | Symbols:  | small nuclear ribonucleoprotein F,
        putative / U6 snRNA-associated Sm-like protein, putative / Sm protein
        F, putative | chr2:18149725-18150879 FORWARD

          Length = 92

 Score =  149 bits (374), Expect = 4e-036
 Identities = 73/90 (81%), Positives = 78/90 (86%)
 Frame = -3

Query: 826 GVEIIVSGTTKTPSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQ 647
           GV    SGTTKTP+DFLKSIRG+PVV+KLNSGVDYRGILTCLDGYMNIAMEQTEEYVN Q
Sbjct:   3 GVGEKASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNGQ 62

Query: 646 LKSKYGDAFIRGNNVLYISTVNTPLPDGA* 557
           LK+ YGDAF+RGNNVLYIST    L DGA*
Sbjct:  63 LKNTYGDAFVRGNNVLYISTTKGTLSDGA* 92

>TAIR9_protein||AT4G30220.1 | Symbols: RUXF | RUXF (SMALL NUCLEAR
        RIBONUCLEOPROTEIN F) | chr4:14803100-14804259 REVERSE

          Length = 89

 Score =  69 bits (167), Expect = 4e-012
 Identities = 30/69 (43%), Positives = 45/69 (65%)
 Frame = -3

Query: 790 PSDFLKSIRGRPVVLKLNSGVDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGDAFIRG 611
           P  FL ++ G+ V++KL  G++Y+G L  +D YMN+ +  TEEY++ QL    G+  IR 
Sbjct:   8 PKPFLNNLTGKTVIVKLKWGMEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNLGEILIRC 67

Query: 610 NNVLYISTV 584
           NNVLY+  V
Sbjct:  68 NNVLYVRGV 76

>TAIR9_protein||AT2G14285.1 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
        cellular_component unknown; CONTAINS InterPro DOMAIN/s: Small nuclear
        ribonucleoprotein SmF (InterPro:IPR016487), Like-Sm ribonucleoprotein,
        core (InterPro:IPR001163), Like-Sm ribonucleoprotein, eukaryotic and
        archaea-type, core (InterPro:IPR006649), Like-Sm
        ribonucleoprotein-related, core (InterPro:IPR010920); BEST Arabidopsis
        thaliana protein match is: RUXF (SMALL NUCLEAR RIBONUCLEOPROTEIN F)
        (TAIR:AT4G30220.1); Has 585 Blast hits to 585 proteins in 157 species:
        Archae - 67; Bacteria - 0; Metazoa - 219; Fungi - 139; Plants - 63;
        Viruses - 0; Other Eukaryotes - 97 (source: NCBI BLink). |
        chr2:6052612-6053500 REVERSE

          Length = 62

 Score =  52 bits (122), Expect = 6e-007
 Identities = 22/49 (44%), Positives = 32/49 (65%)
 Frame = -3

Query: 730 VDYRGILTCLDGYMNIAMEQTEEYVNRQLKSKYGDAFIRGNNVLYISTV 584
           ++Y+G L  +D YMN+ +  TEEY++ QL    G+  IR NNVLY+  V
Sbjct:   1 MEYKGFLASVDSYMNLQLGNTEEYIDGQLTGNLGEILIRCNNVLYVRGV 49

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,114,567,858
Number of Sequences: 33410
Number of Extensions: 21114567858
Number of Successful Extensions: 664549188
Number of sequences better than 0.0: 0