BLASTX 7.6.2
Query= UN43387 /QuerySize=638
(637 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9T029|RS254_ARATH 40S ribosomal protein S25-4 OS=Arabidopsis... 72 3e-012
sp|Q9SIK2|RS252_ARATH 40S ribosomal protein S25-2 OS=Arabidopsis... 70 1e-011
sp|Q8GYL5|RS253_ARATH 40S ribosomal protein S25-3 OS=Arabidopsis... 65 2e-010
sp|P46301|RS25_SOLLC 40S ribosomal protein S25 OS=Solanum lycope... 64 5e-010
sp|Q9SIW5|RS251_ARATH 40S ribosomal protein S25-1 OS=Arabidopsis... 59 3e-008
sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein... 59 3e-008
sp|Q94G66|RS25_AMACR 40S ribosomal protein S25 OS=Amaranthus cru... 56 2e-007
sp|Q86AH4|Y8592_DICDI Putative uncharacterized protein DDB_G0271... 55 4e-007
sp|Q80SY5|PR38B_MOUSE Pre-mRNA-splicing factor 38B OS=Mus muscul... 54 7e-007
sp|Q6AXY7|PR38B_RAT Pre-mRNA-splicing factor 38B OS=Rattus norve... 54 1e-006
sp|P49756|RBM25_HUMAN RNA-binding protein 25 OS=Homo sapiens GN=... 53 2e-006
sp|B2RY56|RBM25_MOUSE RNA-binding protein 25 OS=Mus musculus GN=... 53 2e-006
sp|Q9JIX8|ACINU_MOUSE Apoptotic chromatin condensation inducer i... 52 4e-006
>sp|Q9T029|RS254_ARATH 40S ribosomal protein S25-4 OS=Arabidopsis thaliana
GN=RPS25E PE=2 SV=1
Length = 108
Score = 72 bits (175), Expect = 3e-012
Identities = 36/38 (94%), Positives = 38/38 (100%)
Frame = -3
Query: 305 QINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRATNT 192
+INGSLAR+AIRELMAKGVIRMVAAHSSQQIYTRATNT
Sbjct: 71 RINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT 108
>sp|Q9SIK2|RS252_ARATH 40S ribosomal protein S25-2 OS=Arabidopsis thaliana
GN=RPS25B PE=2 SV=1
Length = 108
Score = 70 bits (169), Expect = 1e-011
Identities = 34/38 (89%), Positives = 38/38 (100%)
Frame = -3
Query: 305 QINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRATNT 192
+INGSLAR+AIRELMAKG+IRMV+AHSSQQIYTRATNT
Sbjct: 71 RINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT 108
>sp|Q8GYL5|RS253_ARATH 40S ribosomal protein S25-3 OS=Arabidopsis thaliana
GN=RPS25D PE=3 SV=2
Length = 108
Score = 65 bits (158), Expect = 2e-010
Identities = 32/37 (86%), Positives = 36/37 (97%)
Frame = -3
Query: 305 QINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRATN 195
+INGSLAR+AIRELMAKG IRMV+AHSSQQIYTRAT+
Sbjct: 71 RINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATH 107
>sp|P46301|RS25_SOLLC 40S ribosomal protein S25 OS=Solanum lycopersicum GN=RPS25
PE=3 SV=1
Length = 108
Score = 64 bits (155), Expect = 5e-010
Identities = 31/38 (81%), Positives = 37/38 (97%)
Frame = -3
Query: 305 QINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRATNT 192
+I+GSLARKAIR+LMA+G IRMV+AH+SQQIYTRATNT
Sbjct: 71 RISGSLARKAIRDLMARGSIRMVSAHASQQIYTRATNT 108
>sp|Q9SIW5|RS251_ARATH 40S ribosomal protein S25-1 OS=Arabidopsis thaliana
GN=RPS25A PE=2 SV=2
Length = 108
Score = 59 bits (140), Expect = 3e-008
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = -3
Query: 305 QINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRAT 198
+INGSLARKAIR+LM KG IRMV+ HSSQQI TRAT
Sbjct: 70 RINGSLARKAIRDLMVKGTIRMVSTHSSQQINTRAT 105
>sp|Q5T200|ZC3HD_HUMAN Zinc finger CCCH domain-containing protein 13 OS=Homo
sapiens GN=ZC3H13 PE=1 SV=1
Length = 1668
Score = 59 bits (140), Expect = 3e-008
Identities = 38/82 (46%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Frame = +2
Query: 386 RERD-ARERERRRER-----AQAFMARKIRRERDADREMQRER*ADVDREMQREIGGERE 547
RERD RERER RER + + R+ RER+ +RE +R+R D DR+ RE ERE
Sbjct: 683 RERDRERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDRERERERE 742
Query: 548 RDGERELKLSWQWRKRERYVER 613
RD E+E + + R+RER ER
Sbjct: 743 RDREKEREREREERERERERER 764
>sp|Q94G66|RS25_AMACR 40S ribosomal protein S25 OS=Amaranthus cruentus GN=RPS25
PE=3 SV=1
Length = 114
Score = 56 bits (133), Expect = 2e-007
Identities = 26/37 (70%), Positives = 33/37 (89%)
Frame = -3
Query: 305 QINGSLARKAIRELMAKGVIRMVAAHSSQQIYTRATN 195
+INGSLAR+AIREL+++G I+MV HSS QIYTR+TN
Sbjct: 70 RINGSLARRAIRELVSRGAIKMVCHHSSLQIYTRSTN 106
>sp|Q86AH4|Y8592_DICDI Putative uncharacterized protein DDB_G0271982
OS=Dictyostelium discoideum GN=DDB_G0271982 PE=4 SV=1
Length = 629
Score = 55 bits (130), Expect = 4e-007
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Frame = +2
Query: 386 RERDARERERRRERAQAFMARKIRRERDADREMQRER*ADVDREMQREIGGERERDGERE 565
RE++ +ERER RER R+ RER+ +RE +RER + ++E +RE ERER+ ERE
Sbjct: 332 REKE-KERERERER-----EREREREREREREREREREKEKEKERERERERERERERERE 385
Query: 566 LKLSWQWRKRERYVER 613
+ + R+RE+ ER
Sbjct: 386 KEFEKERREREKERER 401
>sp|Q80SY5|PR38B_MOUSE Pre-mRNA-splicing factor 38B OS=Mus musculus GN=Prpf38b
PE=1 SV=1
Length = 542
Score = 54 bits (128), Expect = 7e-007
Identities = 31/79 (39%), Positives = 45/79 (56%)
Frame = +2
Query: 383 LRERDARERERRRERAQAFMARKIRRERDADREMQRER*ADVDREMQREIGGERERDGER 562
L R +R RER R R+++ + RR+RD +RE + ER DR+ +E G +RERD ER
Sbjct: 326 LDRRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKERGSDRERDRER 385
Query: 563 ELKLSWQWRKRERYVERFH 619
+ S + R R E+ H
Sbjct: 386 SRERSKEQRSRGDGEEKKH 404
>sp|Q6AXY7|PR38B_RAT Pre-mRNA-splicing factor 38B OS=Rattus norvegicus
GN=Prpf38b PE=2 SV=1
Length = 542
Score = 54 bits (127), Expect = 1e-006
Identities = 30/79 (37%), Positives = 45/79 (56%)
Frame = +2
Query: 383 LRERDARERERRRERAQAFMARKIRRERDADREMQRER*ADVDREMQREIGGERERDGER 562
L R +R RER R R+++ + RR+RD +RE + ER DR+ ++ G +RERD ER
Sbjct: 325 LDRRRSRSRERHRSRSRSRDRKGDRRDRDREREKENERGRRRDRDYDKDRGNDRERDRER 384
Query: 563 ELKLSWQWRKRERYVERFH 619
+ S + R R E+ H
Sbjct: 385 SRERSKEQRSRGEGEEKKH 403
>sp|P49756|RBM25_HUMAN RNA-binding protein 25 OS=Homo sapiens GN=RBM25 PE=1
SV=3
Length = 843
Score = 53 bits (125), Expect = 2e-006
Identities = 28/59 (47%), Positives = 38/59 (64%)
Frame = +3
Query: 387 ERETRERERDGERELKLSWRERSEEREMRTERCRERDRRTWIGRCRER*AERERETERE 563
E+E RERER+ ERE + RER ERE E+ +ER+R R R+R ER+R+ +RE
Sbjct: 306 EKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRE 364
Score = 52 bits (124), Expect = 2e-006
Identities = 30/75 (40%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Frame = +2
Query: 389 ERDARERERRRERAQAFMARKIRRERDADREMQRER*ADVDREMQREIGGERERDGEREL 568
E++ RERER RER + R+ RER+ +RE ++ER + +R+ R+ ER+RD +RE
Sbjct: 306 EKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRER 365
Query: 569 KLSWQWRKRERYVER 613
R RER +R
Sbjct: 366 DRD---RDRERSSDR 377
>sp|B2RY56|RBM25_MOUSE RNA-binding protein 25 OS=Mus musculus GN=Rbm25 PE=1
SV=1
Length = 841
Score = 53 bits (125), Expect = 2e-006
Identities = 28/59 (47%), Positives = 38/59 (64%)
Frame = +3
Query: 387 ERETRERERDGERELKLSWRERSEEREMRTERCRERDRRTWIGRCRER*AERERETERE 563
E+E RERER+ ERE + RER ERE E+ +ER+R R R+R ER+R+ ER+
Sbjct: 308 EKERRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRERD 366
Score = 53 bits (125), Expect = 2e-006
Identities = 29/64 (45%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +2
Query: 386 RERDARERERRRERAQAFMARKIRRERDADREMQRER*ADVDREMQREIGGERERDGERE 565
RER+ RERER RER + R+ RER+ ++E +RER D DR+ +E +RERD +R+
Sbjct: 312 RERE-RERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRERDRDRD 370
Query: 566 LKLS 577
+ S
Sbjct: 371 RERS 374
>sp|Q9JIX8|ACINU_MOUSE Apoptotic chromatin condensation inducer in the nucleus
OS=Mus musculus GN=Acin1 PE=1 SV=2
Length = 1338
Score = 52 bits (122), Expect = 4e-006
Identities = 27/75 (36%), Positives = 46/75 (61%)
Frame = +2
Query: 389 ERDARERERRRERAQAFMARKIRRERDADREMQRER*ADVDREMQREIGGERERDGEREL 568
+++A + ER +ER + R+ +++ ++E +RER ++RE +RE ERERD ERE
Sbjct: 1235 QKEAEQAERAKEREKRRKEREEEEQKEREKEAERERNRQLEREKRREHSRERERDRERER 1294
Query: 569 KLSWQWRKRERYVER 613
+ R+RER +R
Sbjct: 1295 DRGDRERERERDRDR 1309
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,931,892,944
Number of Sequences: 518415
Number of Extensions: 164931892944
Number of Successful Extensions: 1021520109
Number of sequences better than 0.0: 0
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