BLASTX 7.6.2
Query= UN43404 /QuerySize=676
(675 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G13170.1 | Symbols: | 60S ribosomal protein L... 321 3e-088
TAIR9_protein||AT3G24830.1 | Symbols: | 60S ribosomal protein L... 320 4e-088
TAIR9_protein||AT5G48760.1 | Symbols: | 60S ribosomal protein L... 319 1e-087
TAIR9_protein||AT5G48760.2 | Symbols: | 60S ribosomal protein L... 319 1e-087
TAIR9_protein||AT3G07110.1 | Symbols: | 60S ribosomal protein L... 314 4e-086
TAIR9_protein||AT3G07110.2 | Symbols: | 60S ribosomal protein L... 309 1e-084
>TAIR9_protein||AT4G13170.1 | Symbols: | 60S ribosomal protein L13A (RPL13aC) |
chr4:7655133-7656542 REVERSE
Length = 207
Score = 321 bits (821), Expect = 3e-088
Identities = 154/168 (91%), Positives = 163/168 (97%)
Frame = -3
Query: 634 MVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRCMIPHKTKR 455
+VRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVR MIPHKTKR
Sbjct: 40 VVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKR 99
Query: 454 GAAALARMKVFEGVPPPYDKVKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK 275
GAAALAR+KVFEG+PPPYDK+KRMVIPDALKVLRLQ+GHKYCLLGRLSSEVGWNHYDTIK
Sbjct: 100 GAAALARLKVFEGIPPPYDKIKRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIK 159
Query: 274 ELETKRKERSQVVYERKKQLNKLRAKAEKVAEEKLGAQLQILALVKY* 131
ELETKRKERSQV+YERKKQLNKLR KAEKVAEE+LG+QL +LA VKY*
Sbjct: 160 ELETKRKERSQVMYERKKQLNKLRTKAEKVAEERLGSQLDVLAPVKY* 207
>TAIR9_protein||AT3G24830.1 | Symbols: | 60S ribosomal protein L13A (RPL13aB) |
chr3:9064613-9065871 FORWARD
Length = 207
Score = 320 bits (820), Expect = 4e-088
Identities = 156/171 (91%), Positives = 162/171 (94%)
Frame = -3
Query: 643 STKMVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRCMIPHK 464
S +VRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVR MIPHK
Sbjct: 37 SVVVVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHK 96
Query: 463 TKRGAAALARMKVFEGVPPPYDKVKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYD 284
TKRGAAALAR+KVFEGVPPPYDKVKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYD
Sbjct: 97 TKRGAAALARLKVFEGVPPPYDKVKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYD 156
Query: 283 TIKELETKRKERSQVVYERKKQLNKLRAKAEKVAEEKLGAQLQILALVKY* 131
TIKELE KRKERSQ +YERKKQL KLRAKAEKVAEEKLG+QL +LA +KY*
Sbjct: 157 TIKELEVKRKERSQALYERKKQLTKLRAKAEKVAEEKLGSQLDVLASIKY* 207
>TAIR9_protein||AT5G48760.1 | Symbols: | 60S ribosomal protein L13A (RPL13aD) |
chr5:19771315-19772686 REVERSE
Length = 207
Score = 319 bits (816), Expect = 1e-087
Identities = 156/168 (92%), Positives = 161/168 (95%)
Frame = -3
Query: 634 MVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRCMIPHKTKR 455
+VRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVR MIPHKTKR
Sbjct: 40 IVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKR 99
Query: 454 GAAALARMKVFEGVPPPYDKVKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK 275
GAAALAR+KV+EGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK
Sbjct: 100 GAAALARLKVYEGVPTPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK 159
Query: 274 ELETKRKERSQVVYERKKQLNKLRAKAEKVAEEKLGAQLQILALVKY* 131
ELETKRKER+ VVYERKKQLNKLR KAEKVAEEKLGAQL ILA VKY*
Sbjct: 160 ELETKRKERAHVVYERKKQLNKLRVKAEKVAEEKLGAQLDILAPVKY* 207
>TAIR9_protein||AT5G48760.2 | Symbols: | 60S ribosomal protein L13A (RPL13aD) |
chr5:19771315-19772686 REVERSE
Length = 207
Score = 319 bits (816), Expect = 1e-087
Identities = 156/168 (92%), Positives = 161/168 (95%)
Frame = -3
Query: 634 MVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRCMIPHKTKR 455
+VRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVR MIPHKTKR
Sbjct: 40 IVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKR 99
Query: 454 GAAALARMKVFEGVPPPYDKVKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK 275
GAAALAR+KV+EGVP PYDK+KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK
Sbjct: 100 GAAALARLKVYEGVPTPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK 159
Query: 274 ELETKRKERSQVVYERKKQLNKLRAKAEKVAEEKLGAQLQILALVKY* 131
ELETKRKER+ VVYERKKQLNKLR KAEKVAEEKLGAQL ILA VKY*
Sbjct: 160 ELETKRKERAHVVYERKKQLNKLRVKAEKVAEEKLGAQLDILAPVKY* 207
>TAIR9_protein||AT3G07110.1 | Symbols: | 60S ribosomal protein L13A (RPL13aA) |
chr3:2252092-2253332 FORWARD
Length = 207
Score = 314 bits (803), Expect = 4e-086
Identities = 152/168 (90%), Positives = 160/168 (95%)
Frame = -3
Query: 634 MVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRCMIPHKTKR 455
+VRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVR MIPHKTKR
Sbjct: 40 VVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKR 99
Query: 454 GAAALARMKVFEGVPPPYDKVKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK 275
GA ALAR+KVFEGVP PYDK+KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK
Sbjct: 100 GANALARLKVFEGVPTPYDKIKRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK 159
Query: 274 ELETKRKERSQVVYERKKQLNKLRAKAEKVAEEKLGAQLQILALVKY* 131
ELE KRKER+Q VYERKKQL+KLRAKAEKVAEEKLG+QL +LA VKY*
Sbjct: 160 ELENKRKERAQAVYERKKQLSKLRAKAEKVAEEKLGSQLDVLAPVKY* 207
>TAIR9_protein||AT3G07110.2 | Symbols: | 60S ribosomal protein L13A (RPL13aA) |
chr3:2252092-2253332 FORWARD
Length = 208
Score = 309 bits (791), Expect = 1e-084
Identities = 152/169 (89%), Positives = 160/169 (94%), Gaps = 1/169 (0%)
Frame = -3
Query: 634 MVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRCMIPHKTKR 455
+VRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVR MIPHKTKR
Sbjct: 40 VVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKR 99
Query: 454 GAAALARMKVFEGVPPPYDKVKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK 275
GA ALAR+KVFEGVP PYDK+KRMV+PDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK
Sbjct: 100 GANALARLKVFEGVPTPYDKIKRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIK 159
Query: 274 -ELETKRKERSQVVYERKKQLNKLRAKAEKVAEEKLGAQLQILALVKY* 131
ELE KRKER+Q VYERKKQL+KLRAKAEKVAEEKLG+QL +LA VKY*
Sbjct: 160 QELENKRKERAQAVYERKKQLSKLRAKAEKVAEEKLGSQLDVLAPVKY* 208
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,206,479,740
Number of Sequences: 33410
Number of Extensions: 21206479740
Number of Successful Extensions: 669914328
Number of sequences better than 0.0: 0
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