BLASTX 7.6.2
Query= UN43501 /QuerySize=614
(613 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G40510.1 | Symbols: | 40S ribosomal protein S... 205 2e-053
TAIR9_protein||AT2G40590.1 | Symbols: | 40S ribosomal protein S... 205 2e-053
TAIR9_protein||AT3G56340.1 | Symbols: | 40S ribosomal protein S... 203 9e-053
>TAIR9_protein||AT2G40510.1 | Symbols: | 40S ribosomal protein S26 (RPS26A) |
chr2:16918506-16919623 FORWARD
Length = 134
Score = 205 bits (521), Expect = 2e-053
Identities = 96/97 (98%), Positives = 97/97 (100%)
Frame = -3
Query: 545 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYD 366
MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVY+
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 365 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTP 255
GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTP
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTP 97
Score = 61 bits (147), Expect = 4e-010
Identities = 27/32 (84%)
Frame = -2
Query: 255 PPRFVRRKEDAPKPGQPGQAPRPAGAGAAPRA 160
PPRF RRKED PKPGQPGQAPRPAG GAA A
Sbjct: 98 PPRFARRKEDTPKPGQPGQAPRPAGPGAAAAA 129
>TAIR9_protein||AT2G40590.1 | Symbols: | 40S ribosomal protein S26 (RPS26B) |
chr2:16945215-16946345 REVERSE
Length = 132
Score = 205 bits (521), Expect = 2e-053
Identities = 96/97 (98%), Positives = 97/97 (100%)
Frame = -3
Query: 545 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYD 366
MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVY+
Sbjct: 1 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 365 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTP 255
GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTP
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTP 97
Score = 60 bits (145), Expect = 7e-010
Identities = 26/29 (89%)
Frame = -2
Query: 255 PPRFVRRKEDAPKPGQPGQAPRPAGAGAA 169
PPRF RRKED PKPGQPGQAPRPAG GAA
Sbjct: 98 PPRFTRRKEDTPKPGQPGQAPRPAGPGAA 126
>TAIR9_protein||AT3G56340.1 | Symbols: | 40S ribosomal protein S26 (RPS26C) |
chr3:20892309-20893343 REVERSE
Length = 131
Score = 203 bits (515), Expect = 9e-053
Identities = 95/97 (97%), Positives = 96/97 (98%)
Frame = -3
Query: 545 MTFKRRNGGRNKHNRGHVNPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYD 366
MTFKRRNGGRNKHNRGHV PIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVY+
Sbjct: 1 MTFKRRNGGRNKHNRGHVKPIRCSNCGKCCPKDKAIKRFIVRNIVEQAAIRDVQEASVYE 60
Query: 365 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTP 255
GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTP
Sbjct: 61 GYTLPKLYAKTQYCVSCAIHSHVVRVRSRTNRRVRTP 97
Score = 59 bits (141), Expect = 2e-009
Identities = 28/34 (82%), Gaps = 1/34 (2%)
Frame = -2
Query: 255 PPRFVRRKEDAPKPGQPGQAPRPA-GAGAAPRA* 157
PPRF RRKED PKP QPGQAPRPA GA AAPRA*
Sbjct: 98 PPRFARRKEDTPKPAQPGQAPRPAGGAPAAPRA* 131
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,250,453,961
Number of Sequences: 33410
Number of Extensions: 21250453961
Number of Successful Extensions: 669993054
Number of sequences better than 0.0: 0
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