BLASTX 7.6.2
Query= UN43553 /QuerySize=998
(997 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|145357606|ref|NP_195994.3| histone deacetylase HDT3 [Arabidop... 194 3e-047
gi|7340659|emb|CAB82939.1| histone deacetylase-like protein [Ara... 185 1e-044
gi|297810603|ref|XP_002873185.1| predicted protein [Arabidopsis ... 177 4e-042
gi|269969914|gb|ACZ54946.1| type 2 histone deacetylase b [Nicoti... 167 4e-039
gi|269969912|gb|ACZ54945.1| type 2 histone deacetylase a [Nicoti... 166 6e-039
gi|118481941|gb|ABK92903.1| unknown [Populus trichocarpa] 144 3e-032
gi|118482528|gb|ABK93186.1| unknown [Populus trichocarpa] 144 3e-032
gi|224131666|ref|XP_002328078.1| histone deacetylase [Populus tr... 144 3e-032
gi|334185733|ref|NP_001190012.1| histone deacetylase HDT1 [Arabi... 144 3e-032
gi|18407844|ref|NP_566872.1| histone deacetylase HDT1 [Arabidops... 143 7e-032
gi|2392769|gb|AAB70032.1| putative histone deacetylase [Arabidop... 143 7e-032
gi|225440996|ref|XP_002277422.1| PREDICTED: hypothetical protein... 142 1e-031
gi|84468402|dbj|BAE71284.1| putative histone deacetylase [Trifol... 136 9e-030
gi|297806343|ref|XP_002871055.1| hypothetical protein ARALYDRAFT... 132 8e-029
gi|255638252|gb|ACU19439.1| unknown [Glycine max] 132 1e-028
gi|118484193|gb|ABK93977.1| unknown [Populus trichocarpa] 131 2e-028
gi|297815600|ref|XP_002875683.1| hypothetical protein ARALYDRAFT... 128 1e-027
gi|255573038|ref|XP_002527449.1| Histone deacetylase 2a, putativ... 126 7e-027
gi|297740060|emb|CBI30242.3| unnamed protein product [Vitis vini... 123 6e-026
gi|224069776|ref|XP_002326411.1| histone deacetylase [Populus tr... 122 1e-025
>gi|145357606|ref|NP_195994.3| histone deacetylase HDT3 [Arabidopsis thaliana]
Length = 294
Score = 194 bits (491), Expect = 3e-047
Identities = 100/170 (58%), Positives = 121/170 (71%), Gaps = 5/170 (2%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGEKKNGGNEPVRLYTKVEDQKLLIGTLSH 722
MEFWGVEVK G+PL +DPG D +VHIS ALGE KN EP++LY V KLLIGTLSH
Sbjct: 1 MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH 60
Query: 721 DKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVDAHESDSES--DDEEPAE--PAVAKS 554
+KFPQL TEIVL R+F LSH+WK+GSVFF+GY VDA + + E DD+ A A KS
Sbjct: 61 EKFPQLSTEIVLERNFALSHTWKNGSVFFSGYKVDASDPEPEDLIDDQLEAAGFKAAPKS 120
Query: 553 GVKQVNFQLPNDDAKAEQDDD-DDEDEDDSDDEDADSEDAEANTSKTASN 407
KQVNFQLPN+D KA+QDDD D +ED SDD+D+++ E TA +
Sbjct: 121 AAKQVNFQLPNEDVKAKQDDDADGSEEDSSDDDDSENSGDEEEEKVTAES 170
>gi|7340659|emb|CAB82939.1| histone deacetylase-like protein [Arabidopsis
thaliana]
Length = 296
Score = 185 bits (468), Expect = 1e-044
Identities = 98/176 (55%), Positives = 116/176 (65%), Gaps = 15/176 (8%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGEKKNGGNEPVRLYTKVEDQKLLIGTLSH 722
MEFWGVEVK G+PL +DPG D +VHIS ALGE KN EP++LY V KLLIGTLSH
Sbjct: 1 MEFWGVEVKNGKPLHLDPGLDRLVHISQVALGESKNNVTEPIQLYVTVGSDKLLIGTLSH 60
Query: 721 DKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVDAHESDSESDDEEPA----------E 572
+KFPQL TEIVL R+F LSH+WK+GSVFF+GY D D E A
Sbjct: 61 EKFPQLSTEIVLERNFALSHTWKNGSVFFSGY----KPEDLIDDQLEAAGFKGKWGLLYP 116
Query: 571 PAVAKSGVKQVNFQLPNDDAKAEQDDD-DDEDEDDSDDEDADSEDAEANTSKTASN 407
PA KS KQVNFQLPN+D KA+QDDD D +ED SDD+D+++ E TA +
Sbjct: 117 PAAPKSAAKQVNFQLPNEDVKAKQDDDADGSEEDSSDDDDSENSGDEEEEKVTAES 172
>gi|297810603|ref|XP_002873185.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 313
Score = 177 bits (447), Expect = 4e-042
Identities = 101/204 (49%), Positives = 127/204 (62%), Gaps = 6/204 (2%)
Frame = -1
Query: 871 GEPLRVDPGKDMIVHISLAALGEKKNGGNEPVRLYTKVEDQKLLIGTLSHDKFPQLCTEI 692
G PL + + IS ALGE +N G EP++LY V K LIGTLSH++FPQL T I
Sbjct: 50 GRPLITRDDQPYVHFISQVALGENQNNGTEPIQLYLIVGSAKRLIGTLSHERFPQLATAI 109
Query: 691 VLPRSFELSHSWKDGSVFFTGYI--VDAHESDSESDDEEPAEPAVAKSGVKQVNFQLPND 518
VL R F LSH+WK+GSVFF+ + VD H+ + D E+ E K + + + D
Sbjct: 110 VLERHFSLSHTWKNGSVFFSDDVIDVDGHDDYDDCDFEDSGEEEEEKLTAEPDSEEDDED 169
Query: 517 DAKAEQDDDDDEDEDDSDDEDADSEDAEANTSKT-ASNKKAKFVTPQKSESKKPHVHVAT 341
D+ ++ DD E+E E + AEAN+SK A NKKAKF TPQK++SKKPHVHVAT
Sbjct: 170 DSSDDEVDDSSEEETPKKPEASKKRSAEANSSKNPAPNKKAKFETPQKTDSKKPHVHVAT 229
Query: 340 PHPSK--GVKSSGSN-GETSKLQQ 278
PHPSK G S GS+ GETSK QQ
Sbjct: 230 PHPSKQAGKNSGGSSIGETSKQQQ 253
>gi|269969914|gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
Length = 294
Score = 167 bits (421), Expect = 4e-039
Identities = 101/262 (38%), Positives = 141/262 (53%), Gaps = 57/262 (21%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGEKKNGGNEPVRLYTKVEDQKLLIGTLSH 722
MEFWG EVK GEPL V PG M++H+S A+LGE K + V L ++ +KL++GTL+
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKVQSVCLSVNIDGKKLVLGTLNS 60
Query: 721 DKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIV--DAHESDSESDDEEPAEPAV----- 563
DK PQ ++V R FELSH+WK+GSV+F GY E + + DDEE ++ +
Sbjct: 61 DKVPQQQFDLVFDRDFELSHNWKNGSVYFFGYKATNPFEEEEDDEDDEEESDEDIPLTIA 120
Query: 562 --------------------AKSGVKQVNFQLPNDDAKAEQDDD--------DDEDED-- 473
+ SG ++V P+ DAKA+ +D+ +DED D
Sbjct: 121 NNGKPEAKVKEAEKSNAAKDSASGKQKVKIVEPSKDAKADDEDESTDEDEMSEDEDSDVG 180
Query: 472 ---DSDDEDADSEDAEANT---------------SKTASNKKAKFVTPQKSESKKPHVHV 347
D DED +S+++E T +KT ++KKAKFVTPQK++ KK HV
Sbjct: 181 EGEDESDEDDESDESEEETPKKAEPGKKRKADSATKTPADKKAKFVTPQKTDGKKGSGHV 240
Query: 346 ATPHPSK--GVKSSGSNGETSK 287
ATPHPSK G + N +T K
Sbjct: 241 ATPHPSKQAGKSPANKNQQTPK 262
>gi|269969912|gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
Length = 295
Score = 166 bits (419), Expect = 6e-039
Identities = 104/263 (39%), Positives = 138/263 (52%), Gaps = 58/263 (22%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGEKKNGGNEPVRLYTKVEDQKLLIGTLSH 722
MEFWG EVK GEPL V PG M++H+S A+LGE K + V L ++ +KL++GTLS
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKAQSVCLSVNIDGKKLVLGTLSS 60
Query: 721 DKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVD---AHESDSESDDEEPAEPA----- 566
DK PQ ++V R FELSH+WK GSV+F GY E D E D+EE E
Sbjct: 61 DKVPQQQFDLVFDRDFELSHNWKSGSVYFFGYKATNPFEEEEDDEDDEEESDEDIPLTIA 120
Query: 565 ----------------VAK---SGVKQVNFQLPNDDAKAEQDDDDDEDEDDSDDEDAD-- 449
VAK SG ++V P+ DAKA+ +D+ ++++ S+DED+D
Sbjct: 121 NNGKPEAKVKEAEKSNVAKDSASGKQKVKIVEPSKDAKADDEDESTDEDEMSEDEDSDMG 180
Query: 448 -----------SEDAEANTSKTAS----------------NKKAKFVTPQKSESKKPHVH 350
S++ E T K A +KKAKFVTPQK++ KK H
Sbjct: 181 EGEDESDGDDESDEGEEETPKKAEPGKKRKADSATKTPVPDKKAKFVTPQKTDGKKGSGH 240
Query: 349 VATPHPSK--GVKSSGSNGETSK 287
VATPHPSK G + N +T K
Sbjct: 241 VATPHPSKQAGKSPANKNQQTPK 263
>gi|118481941|gb|ABK92903.1| unknown [Populus trichocarpa]
Length = 279
Score = 144 bits (362), Expect = 3e-032
Identities = 75/164 (45%), Positives = 101/164 (61%), Gaps = 11/164 (6%)
Frame = -1
Query: 904 SMEFWGVEVKGGEPLRVDPGKDMIVHISLAALGEKKNGGNEPVRLYTKVEDQKLLIGTLS 725
SMEFWGVEVK GEPL+V+P ++H+S AALGE GNE V L+ K++++KL++GTLS
Sbjct: 3 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSKKGNESVPLFLKLDEKKLVLGTLS 62
Query: 724 HDKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVDAHESDSESDDEEPAEPAVAKSGVK 545
DK PQL ++V R FELSH+WK+GSVFF GY E+DS+ D+ P V+
Sbjct: 63 PDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIPENDSDFSDDGDEIPF---EKVE 119
Query: 544 QVNFQLPNDDAKAEQ--------DDDDDEDEDDSDDEDADSEDA 437
V F D A + DDE +DD D+D+D +D+
Sbjct: 120 NVKFATGTDKAAKPEKPKANPVVPSKDDESDDDDSDDDSDEDDS 163
>gi|118482528|gb|ABK93186.1| unknown [Populus trichocarpa]
Length = 279
Score = 144 bits (362), Expect = 3e-032
Identities = 75/164 (45%), Positives = 101/164 (61%), Gaps = 11/164 (6%)
Frame = -1
Query: 904 SMEFWGVEVKGGEPLRVDPGKDMIVHISLAALGEKKNGGNEPVRLYTKVEDQKLLIGTLS 725
SMEFWGVEVK GEPL+V+P ++H+S AALGE GNE V L+ K++++KL++GTLS
Sbjct: 3 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSKKGNESVPLFLKLDEKKLVLGTLS 62
Query: 724 HDKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVDAHESDSESDDEEPAEPAVAKSGVK 545
DK PQL ++V R FELSH+WK+GSVFF GY E+DS+ D+ P V+
Sbjct: 63 PDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIPENDSDFSDDGDEIPF---EKVE 119
Query: 544 QVNFQLPNDDAKAEQ--------DDDDDEDEDDSDDEDADSEDA 437
V F D A + DDE +DD D+D+D +D+
Sbjct: 120 NVKFATGTDKAAKPEKPKANPVVPSKDDESDDDDSDDDSDEDDS 163
>gi|224131666|ref|XP_002328078.1| histone deacetylase [Populus trichocarpa]
Length = 260
Score = 144 bits (362), Expect = 3e-032
Identities = 75/164 (45%), Positives = 101/164 (61%), Gaps = 11/164 (6%)
Frame = -1
Query: 904 SMEFWGVEVKGGEPLRVDPGKDMIVHISLAALGEKKNGGNEPVRLYTKVEDQKLLIGTLS 725
SMEFWGVEVK GEPL+V+P ++H+S AALGE GNE V L+ K++++KL++GTLS
Sbjct: 3 SMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSKKGNESVPLFLKLDEKKLVLGTLS 62
Query: 724 HDKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVDAHESDSESDDEEPAEPAVAKSGVK 545
DK PQL ++V R FELSH+WK+GSVFF GY E+DS+ D+ P V+
Sbjct: 63 PDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIPENDSDFSDDGDEIPF---EKVE 119
Query: 544 QVNFQLPNDDAKAEQ--------DDDDDEDEDDSDDEDADSEDA 437
V F D A + DDE +DD D+D+D +D+
Sbjct: 120 NVKFATGTDKAAKPEKPKANPVVPSKDDESDDDDSDDDSDEDDS 163
>gi|334185733|ref|NP_001190012.1| histone deacetylase HDT1 [Arabidopsis
thaliana]
Length = 242
Score = 144 bits (362), Expect = 3e-032
Identities = 87/211 (41%), Positives = 116/211 (54%), Gaps = 10/211 (4%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGEKKNGGNEPVRLYTKVEDQKLLIGTLSH 722
MEFWG+EVK G+P+ V P + +++H+S A+LGE KN E V L+ KV +Q L++GTLS
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 721 DKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVDAHESDSESDDEEPAEP------AVA 560
+ PQL ++V + FELSH+W GSV+F GY E S++EE P AVA
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEPQGYSEEEEEEVPAGNAAKAVA 120
Query: 559 KSGVKQVNFQLPNDDAKAEQDDDDDEDEDDSDDEDADSEDAEANTSKTASNKK-AKFVTP 383
K K + P D + ++ D D DEDDSD E DSE+ E K AS+KK A TP
Sbjct: 121 KPKAKPAEVK-PAVDDEEDESDSDGMDEDDSDGE--DSEEEEPTPKKPASSKKRANETTP 177
Query: 382 QKSESKKPHVHVATPHPSKGVKSSGSNGETS 290
+ S K TP + K G S
Sbjct: 178 KAPVSAKKAKVAVTPQKTDEKKKGGKAANQS 208
>gi|18407844|ref|NP_566872.1| histone deacetylase HDT1 [Arabidopsis thaliana]
Length = 245
Score = 143 bits (358), Expect = 7e-032
Identities = 87/214 (40%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGEKKNGGNEPVRLYTKVEDQKLLIGTLSH 722
MEFWG+EVK G+P+ V P + +++H+S A+LGE KN E V L+ KV +Q L++GTLS
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 721 DKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVDAHESDSESDDEEPAE---------P 569
+ PQL ++V + FELSH+W GSV+F GY E S++EE E
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEPQGYSEEEEEEEEEVPAGNAAK 120
Query: 568 AVAKSGVKQVNFQLPNDDAKAEQDDDDDEDEDDSDDEDADSEDAEANTSKTASNKK-AKF 392
AVAK K + P D + ++ D D DEDDSD E DSE+ E K AS+KK A
Sbjct: 121 AVAKPKAKPAEVK-PAVDDEEDESDSDGMDEDDSDGE--DSEEEEPTPKKPASSKKRANE 177
Query: 391 VTPQKSESKKPHVHVATPHPSKGVKSSGSNGETS 290
TP+ S K TP + K G S
Sbjct: 178 TTPKAPVSAKKAKVAVTPQKTDEKKKGGKAANQS 211
>gi|2392769|gb|AAB70032.1| putative histone deacetylase [Arabidopsis thaliana]
Length = 257
Score = 143 bits (358), Expect = 7e-032
Identities = 87/214 (40%), Positives = 116/214 (54%), Gaps = 13/214 (6%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGEKKNGGNEPVRLYTKVEDQKLLIGTLSH 722
MEFWG+EVK G+P+ V P + +++H+S A+LGE KN E V L+ KV +Q L++GTLS
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 721 DKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVDAHESDSESDDEEPAE---------P 569
+ PQL ++V + FELSH+W GSV+F GY E S++EE E
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEPQGYSEEEEEEEEEVPAGNAAK 120
Query: 568 AVAKSGVKQVNFQLPNDDAKAEQDDDDDEDEDDSDDEDADSEDAEANTSKTASNKK-AKF 392
AVAK K + P D + ++ D D DEDDSD E DSE+ E K AS+KK A
Sbjct: 121 AVAKPKAKPAEVK-PAVDDEEDESDSDGMDEDDSDGE--DSEEEEPTPKKPASSKKRANE 177
Query: 391 VTPQKSESKKPHVHVATPHPSKGVKSSGSNGETS 290
TP+ S K TP + K G S
Sbjct: 178 TTPKAPVSAKKAKVAVTPQKTDEKKKGGKAANQS 211
>gi|225440996|ref|XP_002277422.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 307
Score = 142 bits (357), Expect = 1e-031
Identities = 75/172 (43%), Positives = 108/172 (62%), Gaps = 6/172 (3%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGE-KKNGGNEPVRLYTKVEDQKLLIGTLS 725
MEFWGVEVK GEPL V PG DM+VHIS A+LGE KK+ GNE V LY + QKL++GTLS
Sbjct: 1 MEFWGVEVKAGEPLEVVPGDDMLVHISQASLGEIKKDKGNELVCLYANIGGQKLVLGTLS 60
Query: 724 HDKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVDAHESDSESDDEEPAEPAVAKSGVK 545
+KFPQ+ ++V + FELSH+WK+GSV+F GY +SDSE + + P V +
Sbjct: 61 AEKFPQISFDLVFEKKFELSHNWKNGSVYFCGYKAAIPDSDSEFEIDLPHNTTVDNGKPQ 120
Query: 544 QVNFQLPNDDAK-----AEQDDDDDEDEDDSDDEDADSEDAEANTSKTASNK 404
Q+ + P A E + D +++ DD D DS+++ + +++ ++
Sbjct: 121 QLKQEKPESAAAKQVKIVEPNKDAKSPKENDDDSDKDSDESMDDEDESSEDE 172
>gi|84468402|dbj|BAE71284.1| putative histone deacetylase [Trifolium pratense]
Length = 304
Score = 136 bits (340), Expect = 9e-030
Identities = 73/174 (41%), Positives = 107/174 (61%), Gaps = 9/174 (5%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGE-KKNGGNEPVRLYTKVEDQKLLIGTLS 725
MEFWG EVK GE L+V+P D I+H+S A LGE K+ G EPV LY K+++QKL +GTLS
Sbjct: 1 MEFWGTEVKSGESLKVEPEDDKIIHLSAACLGEVSKDKGGEPVSLYVKIDNQKLQLGTLS 60
Query: 724 HDKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIV-------DAHESDSESDDEEPAEPA 566
+K PQ+ ++V + FELSH+WK GS+FFTG+ + D +SD +++ P A
Sbjct: 61 SEKIPQISFDLVFEKEFELSHNWKYGSIFFTGFKMESLLVSDDDEDSDDSIEEDNPVNAA 120
Query: 565 VAKSGVKQVNFQLPNDDAKAEQDDDDDEDEDDSDDEDADSEDAEANTSKTASNK 404
K V+ N P + +A+Q+ D + D E+ S D E ++S+T S++
Sbjct: 121 NGKPEVEVKNGAKPGVN-EAQQNKTSDPKKKQKDIENDVSADDEEDSSETDSDE 173
>gi|297806343|ref|XP_002871055.1| hypothetical protein ARALYDRAFT_349656
[Arabidopsis lyrata subsp. lyrata]
Length = 326
Score = 132 bits (332), Expect = 8e-029
Identities = 67/108 (62%), Positives = 79/108 (73%), Gaps = 6/108 (5%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGEKKNGGNEPVRLYTKVEDQKLLIGTLSH 722
ME GVEVK G PL +DPG DM+VHIS ALGE ++ EP++LY V KLLIGTLSH
Sbjct: 1 MESSGVEVKNGTPLHIDPGVDMLVHISQVALGENESNVTEPIQLYVTVGQDKLLIGTLSH 60
Query: 721 DKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVDAHESDSESDDEEP 578
++FPQL TEIVL R+F LSH+WK+GSVFF+GY VDA SDD P
Sbjct: 61 ERFPQLATEIVLERNFALSHTWKNGSVFFSGYKVDA------SDDPYP 102
>gi|255638252|gb|ACU19439.1| unknown [Glycine max]
Length = 288
Score = 132 bits (330), Expect = 1e-028
Identities = 68/162 (41%), Positives = 104/162 (64%), Gaps = 6/162 (3%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGE-KKNGGNEPVRLYTKVEDQKLLIGTLS 725
MEFWGVEVK GE L+VDPG D I+H+S A LG+ K+ PV LY K +QKL++GTLS
Sbjct: 1 MEFWGVEVKSGESLKVDPGDDKIIHLSNACLGDVTKDKEGLPVALYVKFGNQKLVLGTLS 60
Query: 724 HDKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVDAH---ESDSESDDEEPAEPAVAKS 554
+ FPQ+ ++V + FELSH+WK GSVFFTG+ + ++D +SDD + P A +
Sbjct: 61 SEAFPQISYDLVFEKEFELSHNWKHGSVFFTGFKAQSQSESDNDEDSDDFDEDIPVSAAN 120
Query: 553 GVKQVNFQ--LPNDDAKAEQDDDDDEDEDDSDDEDADSEDAE 434
G ++ + + D +A+Q + +++DS + ++D + +E
Sbjct: 121 GKPEIEVKNGIKPDANEAKQKKIANGEDEDSSESESDDDSSE 162
>gi|118484193|gb|ABK93977.1| unknown [Populus trichocarpa]
Length = 305
Score = 131 bits (329), Expect = 2e-028
Identities = 71/139 (51%), Positives = 94/139 (67%), Gaps = 5/139 (3%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGE-KKNGGNEPVRLYTKVEDQKLLIGTLS 725
MEFWGVEVKGGEPLRV+ G I+H+S A LGE KK+ GNE V L+ +DQKL++GTLS
Sbjct: 1 MEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKKDKGNESVCLFVNFDDQKLVLGTLS 60
Query: 724 HDKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVDAHESDSE---SDDEEPAEPAVAKS 554
H+K PQ+ ++V + FELSH+ K+GSVFF+GY V ESDS+ SD EE P +
Sbjct: 61 HEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKVAQPESDSDEFISDGEEDL-PVPVDN 119
Query: 553 GVKQVNFQLPNDDAKAEQD 497
G ++ P ++ A+ D
Sbjct: 120 GKEEAKQPKPENENAAKPD 138
>gi|297815600|ref|XP_002875683.1| hypothetical protein ARALYDRAFT_484880
[Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 128 bits (321), Expect = 1e-027
Identities = 73/208 (35%), Positives = 113/208 (54%), Gaps = 8/208 (3%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGEKKNGGNEPVRLYTKVEDQKLLIGTLSH 722
MEFWG+EVK G+P+ V P + ++H+S A+LGE KN E V L+ KV +Q L++GTLS
Sbjct: 1 MEFWGIEVKPGKPVTVTPKEGTLIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 721 DKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVD--AHESDSESDDEEPAEPAVAKSGV 548
+ PQL ++V + FELSH+W GSV+F GY + +SE ++EE E +
Sbjct: 61 ENIPQLFCDLVFEKEFELSHTWGKGSVYFVGYKTPNIKYPLNSEEEEEEVEEVPAGNAAK 120
Query: 547 KQVNFQLPNDDAKAEQD-DDDDEDEDDSDDEDADSEDAEANTSKTASNKKAKFVTPQKSE 371
+ + K D ++DD D D+ D++D+D +D +T + KK P ++
Sbjct: 121 AVAKPKAKPAEVKPVADAEEDDSDSDEMDEDDSDGDDDSEEEEETPTPKK-----PASNK 175
Query: 370 SKKPHVHVATPHPSKGVKSSGSNGETSK 287
+ TP SK K + + +T K
Sbjct: 176 KRANETAPKTPVSSKKAKVAVTPQKTGK 203
>gi|255573038|ref|XP_002527449.1| Histone deacetylase 2a, putative [Ricinus
communis]
Length = 310
Score = 126 bits (315), Expect = 7e-027
Identities = 62/123 (50%), Positives = 85/123 (69%), Gaps = 6/123 (4%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGE-KKNGGNEPVRLYTKVEDQKLLIGTLS 725
MEFWGVE+K GE L+V+P + ++H+S AALGE KK GNE V LY KV+++K+++GTLS
Sbjct: 1 MEFWGVEIKAGETLKVEPNPESLIHLSQAALGESKKEKGNESVPLYVKVDNKKIILGTLS 60
Query: 724 HDKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVDAHE-----SDSESDDEEPAEPAVA 560
+ FPQ+ +IV + ELSH+WK+GSV+ +GY E S+ ESDDEEP A
Sbjct: 61 QENFPQIAFDIVFEKEVELSHNWKNGSVYLSGYQTPLPEEDDMFSEEESDDEEPLPLVNA 120
Query: 559 KSG 551
+G
Sbjct: 121 DNG 123
>gi|297740060|emb|CBI30242.3| unnamed protein product [Vitis vinifera]
Length = 113
Score = 123 bits (307), Expect = 6e-026
Identities = 59/93 (63%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGE-KKNGGNEPVRLYTKVEDQKLLIGTLS 725
MEFWGVEVK GEPL V PG DM+VHIS A+LGE KK+ GNE V LY + QKL++GTLS
Sbjct: 1 MEFWGVEVKAGEPLEVVPGDDMLVHISQASLGEIKKDKGNELVCLYANIGGQKLVLGTLS 60
Query: 724 HDKFPQLCTEIVLPRSFELSHSWKDGSVFFTGY 626
+KFPQ+ ++V + FELSH+WK+GSV+F GY
Sbjct: 61 AEKFPQISFDLVFEKKFELSHNWKNGSVYFCGY 93
>gi|224069776|ref|XP_002326411.1| histone deacetylase [Populus trichocarpa]
Length = 271
Score = 122 bits (305), Expect = 1e-025
Identities = 68/141 (48%), Positives = 91/141 (64%), Gaps = 7/141 (4%)
Frame = -1
Query: 901 MEFWGVEVKGGEPLRVDPGKDMIVHISLAALGE-KKNGGNEPVRLYTKVEDQKLLIGTLS 725
MEFWGVEVKGGEPLRV+ G I+H+S A LGE KK+ GNE V L+ +DQKL++GTLS
Sbjct: 1 MEFWGVEVKGGEPLRVESGDGFILHLSQACLGEAKKDKGNESVCLFVNFDDQKLVLGTLS 60
Query: 724 HDKFPQLCTEIVLPRSFELSHSWKDGSVFFTGYIVDAHE-----SDSESDDEEPAEPAVA 560
H+K PQ+ ++V + FELSH+ K+GSVFF+GY V E + SD EE P
Sbjct: 61 HEKIPQIPFDLVFEKDFELSHNLKNGSVFFSGYKVAQPEYPFTQINFISDGEEDL-PVPV 119
Query: 559 KSGVKQVNFQLPNDDAKAEQD 497
+G ++ P ++ A+ D
Sbjct: 120 DNGKEEAKQPKPENENAAKPD 140
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,837,552,758,913
Number of Sequences: 15229318
Number of Extensions: 4837552758913
Number of Successful Extensions: 1137592257
Number of sequences better than 0.0: 0
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