BLASTX 7.6.2
Query= UN43584 /QuerySize=509
(508 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G21055.1 | Symbols: PSBTN | PSBTN (photosystem... 175 2e-044
TAIR9_protein||AT1G51400.1 | Symbols: | photosystem II 5 kD pro... 136 1e-032
>TAIR9_protein||AT3G21055.1 | Symbols: PSBTN | PSBTN (photosystem II subunit T)
| chr3:7376761-7377072 REVERSE
Length = 104
Score = 175 bits (442), Expect = 2e-044
Identities = 90/107 (84%), Positives = 98/107 (91%), Gaps = 3/107 (2%)
Frame = -1
Query: 424 MASMTMTATFLPAVAKLPSPTAGRRMSMVRASTSENTTTLEVKPKEEQRSTTMRRDLMFT 245
MASMTMTATF PAVAK+PS T GRR+S+VRASTS+NT +LEVK EQ STTMRRDLMFT
Sbjct: 1 MASMTMTATFFPAVAKVPSATGGRRLSVVRASTSDNTPSLEVK---EQSSTTMRRDLMFT 57
Query: 244 AAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKICRY* 104
AAA+AVC+LAKVAMA+EEEPKRGTEAAKKKYAQVCVTMPTAKICRY*
Sbjct: 58 AAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICRY* 104
>TAIR9_protein||AT1G51400.1 | Symbols: | photosystem II 5 kD protein |
chr1:19052172-19052492 REVERSE
Length = 107
Score = 136 bits (340), Expect = 1e-032
Identities = 74/108 (68%), Positives = 91/108 (84%), Gaps = 6/108 (5%)
Frame = -1
Query: 424 MASMTMTATFLPAVAKLP---SPTAGRRMSMVRASTSENTTTLEVKPKEEQRSTTMRRDL 254
MASMTMT++FLP V+ LP S + R +++V+AS SENTT+LE K++++S MRRDL
Sbjct: 1 MASMTMTSSFLPTVSNLPANISSNSRRSLTVVKASGSENTTSLE--NKKQEQSMKMRRDL 58
Query: 253 MFTAAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKICR 110
+FTAAA+AVC+LAKVAMAD +EPKRGTEAAKKKYA VCVTMPTAKICR
Sbjct: 59 VFTAAAAAVCSLAKVAMAD-DEPKRGTEAAKKKYAPVCVTMPTAKICR 105
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,250,453,961
Number of Sequences: 33410
Number of Extensions: 21250453961
Number of Successful Extensions: 669993054
Number of sequences better than 0.0: 0
|