BLASTX 7.6.2
Query= UN43640 /QuerySize=515
(514 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15224451|ref|NP_181349.1| 30S ribosomal protein S31 [Arabidop... 197 8e-049
gi|297823693|ref|XP_002879729.1| plastid-specific ribosomal prot... 192 2e-047
gi|147853777|emb|CAN83819.1| hypothetical protein VITISV_030951 ... 147 7e-034
gi|225440656|ref|XP_002274396.1| PREDICTED: hypothetical protein... 145 3e-033
gi|297740225|emb|CBI30407.3| unnamed protein product [Vitis vini... 143 2e-032
gi|255581061|ref|XP_002531346.1| structural constituent of ribos... 132 3e-029
gi|224139060|ref|XP_002322970.1| predicted protein [Populus tric... 122 2e-026
gi|326492922|dbj|BAJ90317.1| predicted protein [Hordeum vulgare ... 111 7e-023
gi|242055315|ref|XP_002456803.1| hypothetical protein SORBIDRAFT... 107 6e-022
gi|116780769|gb|ABK21808.1| unknown [Picea sitchensis] 107 8e-022
gi|116785711|gb|ABK23830.1| unknown [Picea sitchensis] 107 8e-022
gi|148908044|gb|ABR17141.1| unknown [Picea sitchensis] 107 8e-022
gi|114152868|sp|P47910.2|RR31_SPIOL RecName: Full=30S ribosomal ... 106 1e-021
gi|194699530|gb|ACF83849.1| unknown [Zea mays] 105 4e-021
gi|195611084|gb|ACG27372.1| PSRP4 [Zea mays] 105 4e-021
gi|226499608|ref|NP_001148387.1| LOC100282000 [Zea mays] 104 5e-021
gi|115462461|ref|NP_001054830.1| Os05g0186000 [Oryza sativa Japo... 104 7e-021
gi|195638986|gb|ACG38961.1| PSRP4 [Zea mays] 94 7e-018
gi|168054110|ref|XP_001779476.1| predicted protein [Physcomitrel... 83 1e-014
gi|168010083|ref|XP_001757734.1| predicted protein [Physcomitrel... 74 1e-011
>gi|15224451|ref|NP_181349.1| 30S ribosomal protein S31 [Arabidopsis thaliana]
Length = 118
Score = 197 bits (499), Expect = 8e-049
Identities = 100/119 (84%), Positives = 107/119 (89%), Gaps = 3/119 (2%)
Frame = -2
Query: 456 MASLLLGAPPRVTVATSPRLLSSSHSET--LSLSCLPQQLSLSASSSSSSVPLVYCGRGD 283
MASL+LGAPPRVTVA LSSSHSET +SLSC Q SLS +SSSSS+PLVYCGRGD
Sbjct: 1 MASLILGAPPRVTVALPSSRLSSSHSETAGVSLSCFTHQFSLS-TSSSSSIPLVYCGRGD 59
Query: 282 RKTARGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFENDEKIKIDIDESLFSN 106
RKTA+GKRFNHSFGNARPRNK+KGRGP+RVPVPPAPPRKDKFENDEKIKIDIDESLFSN
Sbjct: 60 RKTAKGKRFNHSFGNARPRNKSKGRGPERVPVPPAPPRKDKFENDEKIKIDIDESLFSN 118
>gi|297823693|ref|XP_002879729.1| plastid-specific ribosomal protein 4
[Arabidopsis lyrata subsp. lyrata]
Length = 114
Score = 192 bits (487), Expect = 2e-047
Identities = 98/115 (85%), Positives = 104/115 (90%), Gaps = 3/115 (2%)
Frame = -2
Query: 456 MASLLLGAPPRVTVATSPRLLSSSHSET--LSLSCLPQQLSLSASSSSSSVPLVYCGRGD 283
MASL+LGAPPRVTVA S LSSSHSET +SLSC Q SLS +SSSSS+PLVYCGRGD
Sbjct: 1 MASLILGAPPRVTVALSSSRLSSSHSETAGVSLSCSTHQFSLS-TSSSSSIPLVYCGRGD 59
Query: 282 RKTARGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFENDEKIKIDIDES 118
RKTA+GKRFNHSFGNARPRNKNKGRGP+RVPVPPAPPRKDKFENDEKIKIDIDES
Sbjct: 60 RKTAKGKRFNHSFGNARPRNKNKGRGPERVPVPPAPPRKDKFENDEKIKIDIDES 114
>gi|147853777|emb|CAN83819.1| hypothetical protein VITISV_030951 [Vitis
vinifera]
Length = 117
Score = 147 bits (370), Expect = 7e-034
Identities = 74/122 (60%), Positives = 95/122 (77%), Gaps = 11/122 (9%)
Frame = -2
Query: 456 MASLLLGAPPRVTVATSPRLL------SSSHSETLSLSCLPQQLSLSASSSSSSVPLVYC 295
MA+L+LGAP A +P+ L S S SETL++S + +SLS S++S +P VYC
Sbjct: 1 MAALILGAP-----AIAPQSLNLSSRFSFSQSETLAVSFDTRFVSLSISATSPPIPSVYC 55
Query: 294 GRGDRKTARGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFENDEKIKIDIDESL 115
GRGD+KTA+GKRFNHSFGNARPRNK KGRGP R P+PP+PP+KD+FE+DE +KI+IDESL
Sbjct: 56 GRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEIDESL 115
Query: 114 FS 109
F+
Sbjct: 116 FN 117
>gi|225440656|ref|XP_002274396.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 160
Score = 145 bits (365), Expect = 3e-033
Identities = 77/134 (57%), Positives = 101/134 (75%), Gaps = 12/134 (8%)
Frame = -2
Query: 489 LLLLLRQTFTAMASLLLGAPPRVTVATSPRLL------SSSHSETLSLSCLPQQLSLSAS 328
L + L + +AMA+L+LGAP A +P+ L S S SETL++S + +SLS S
Sbjct: 32 LSISLHLSRSAMAALILGAP-----AIAPQSLNLSSRFSFSQSETLAVSFDTRFVSLSIS 86
Query: 327 SSS-SSVPLVYCGRGDRKTARGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFEN 151
++S +P VYCGRGD+KTA+GKRFNHSFGNARPRNK KGRGP R P+PP+PP+KD+FE+
Sbjct: 87 ATSPPPIPSVYCGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFED 146
Query: 150 DEKIKIDIDESLFS 109
DE +KI+IDESLF+
Sbjct: 147 DEVVKIEIDESLFN 160
>gi|297740225|emb|CBI30407.3| unnamed protein product [Vitis vinifera]
Length = 118
Score = 143 bits (358), Expect = 2e-032
Identities = 74/123 (60%), Positives = 95/123 (77%), Gaps = 12/123 (9%)
Frame = -2
Query: 456 MASLLLGAPPRVTVATSPRLL------SSSHSETLSLSCLPQQLSLSASSSS-SSVPLVY 298
MA+L+LGAP A +P+ L S S SETL++S + +SLS S++S +P VY
Sbjct: 1 MAALILGAP-----AIAPQSLNLSSRFSFSQSETLAVSFDTRFVSLSISATSPPPIPSVY 55
Query: 297 CGRGDRKTARGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFENDEKIKIDIDES 118
CGRGD+KTA+GKRFNHSFGNARPRNK KGRGP R P+PP+PP+KD+FE+DE +KI+IDES
Sbjct: 56 CGRGDKKTAKGKRFNHSFGNARPRNKKKGRGPPRAPIPPSPPKKDRFEDDEVVKIEIDES 115
Query: 117 LFS 109
LF+
Sbjct: 116 LFN 118
>gi|255581061|ref|XP_002531346.1| structural constituent of ribosome, putative
[Ricinus communis]
Length = 116
Score = 132 bits (330), Expect = 3e-029
Identities = 70/119 (58%), Positives = 86/119 (72%), Gaps = 9/119 (7%)
Frame = -2
Query: 456 MASLLLGAPPRVTVATSPRLLSSSHSETL----SLSCLPQQLSLSASSSSSS-VPLVYCG 292
MASL++ + +P LSSS SE L S S LS+S +++S+S +P VYCG
Sbjct: 1 MASLMMA----TALPMTPHRLSSSQSEALGVGISFSYSIPSLSVSTTTASTSPIPFVYCG 56
Query: 291 RGDRKTARGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFENDEKIKIDIDESL 115
RGD+KTA+GKRFNHSFGNARPRNKNKGRGP R+PVP +PP D FE+ E +KIDIDESL
Sbjct: 57 RGDKKTAKGKRFNHSFGNARPRNKNKGRGPPRIPVPSSPPTNDIFEDGEVVKIDIDESL 115
>gi|224139060|ref|XP_002322970.1| predicted protein [Populus trichocarpa]
Length = 113
Score = 122 bits (306), Expect = 2e-026
Identities = 66/113 (58%), Positives = 80/113 (70%), Gaps = 4/113 (3%)
Frame = -2
Query: 450 SLLLGAPPRVTVATS-PRLLSSSHSETLSLSCLPQQLSLSASSSSSSVPLVYCGRGDRKT 274
SL++GA P A + LS S S+ +S SL S++ +SVP VYCGRGDRKT
Sbjct: 3 SLMVGAIPMTPQALNFGSRLSYSQSQ---ISLCHSTSSLPLSTARTSVPFVYCGRGDRKT 59
Query: 273 ARGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFENDEKIKIDIDESL 115
RGKRFNHSFGNARPR+K KGRGP R+PVP APP+ DK +DE +KI+IDESL
Sbjct: 60 ERGKRFNHSFGNARPRDKKKGRGPPRIPVPGAPPKIDKSVDDEVVKIEIDESL 112
>gi|326492922|dbj|BAJ90317.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 126
Score = 111 bits (275), Expect = 7e-023
Identities = 54/90 (60%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Frame = -2
Query: 381 SETLSLSCLPQQLSLSA-SSSSSSVPLVYCGRGDRKTARGKRFNHSFGNARPRNKNKGRG 205
S T+S C + L+ +A S+ +SV VYCGRGDRKT RGKRF+HS+GNARPRNK KG G
Sbjct: 32 SATVSFCCSARSLAATAVSAPPTSVLDVYCGRGDRKTKRGKRFSHSYGNARPRNKKKGTG 91
Query: 204 PQRVPVPPAPPRKDKFENDEKIKIDIDESL 115
P R+ PPAPPRKD+FE+ E I I+ID+ +
Sbjct: 92 PARLYAPPAPPRKDQFEDGEIIAIEIDDDI 121
>gi|242055315|ref|XP_002456803.1| hypothetical protein SORBIDRAFT_03g043130
[Sorghum bicolor]
Length = 130
Score = 107 bits (267), Expect = 6e-022
Identities = 57/119 (47%), Positives = 79/119 (66%), Gaps = 4/119 (3%)
Frame = -2
Query: 459 AMASLLLGAPPRVTVATSPRLLSSSHSETLSLSC--LPQQLSLSASSSSSSVPL--VYCG 292
AM++ P A S + +SS++ T S + + ++ A +S++ P+ VYCG
Sbjct: 10 AMSTAAAALPSHNHGAVSSCVSTSSYALTASAAFPRVRAAFAVGAVTSAAVTPVLDVYCG 69
Query: 291 RGDRKTARGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFENDEKIKIDIDESL 115
RGD+KT RGKRFNHS+GNARPRNK KG GP R+ PPAPPRKD+F++ E I I+IDE +
Sbjct: 70 RGDKKTKRGKRFNHSYGNARPRNKKKGTGPPRLFAPPAPPRKDQFDDGEIISIEIDEDI 128
>gi|116780769|gb|ABK21808.1| unknown [Picea sitchensis]
Length = 112
Score = 107 bits (266), Expect = 8e-022
Identities = 56/108 (51%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Frame = -2
Query: 417 VATSPR------LLSSSHSETLSLSCLPQQLSLSASSSSSSVPLVYCGRGDRKTARGKRF 256
+ATSP L SS + LS S ++LS +S P VYCGRGD++TA+GKRF
Sbjct: 4 MATSPMAGQCFLLHSSISGQPLSGSSHNTTVTLSIASPKQFYPTVYCGRGDKRTAKGKRF 63
Query: 255 NHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFENDEKIKIDIDESLF 112
HSFGNARPR+ KGRG P+PP P+KD F++ EKI+I+IDES F
Sbjct: 64 KHSFGNARPRDNKKGRGLPITPLPPGAPKKDLFDDGEKIEIEIDESFF 111
>gi|116785711|gb|ABK23830.1| unknown [Picea sitchensis]
Length = 112
Score = 107 bits (266), Expect = 8e-022
Identities = 56/108 (51%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Frame = -2
Query: 417 VATSPR------LLSSSHSETLSLSCLPQQLSLSASSSSSSVPLVYCGRGDRKTARGKRF 256
+ATSP L SS + LS S ++LS +S P VYCGRGD++TA+GKRF
Sbjct: 4 MATSPMVGQCFLLHSSISGQPLSGSSHNTTVTLSIASPKQFYPTVYCGRGDKRTAKGKRF 63
Query: 255 NHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFENDEKIKIDIDESLF 112
HSFGNARPR+ KGRG P+PP P+KD F++ EKI+I+IDES F
Sbjct: 64 KHSFGNARPRDNKKGRGLPITPLPPGAPKKDLFDDGEKIEIEIDESFF 111
>gi|148908044|gb|ABR17141.1| unknown [Picea sitchensis]
Length = 112
Score = 107 bits (266), Expect = 8e-022
Identities = 56/108 (51%), Positives = 71/108 (65%), Gaps = 6/108 (5%)
Frame = -2
Query: 417 VATSPR------LLSSSHSETLSLSCLPQQLSLSASSSSSSVPLVYCGRGDRKTARGKRF 256
+ATSP L SS + LS S ++LS +S P VYCGRGD++TA+GKRF
Sbjct: 4 MATSPMAGQCFLLHSSISGQPLSGSSHNTTVTLSIASPKQFYPTVYCGRGDKRTAKGKRF 63
Query: 255 NHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFENDEKIKIDIDESLF 112
HSFGNARPR+ KGRG P+PP P+KD F++ EKI+I+IDES F
Sbjct: 64 KHSFGNARPRDNKKGRGLPITPLPPGAPKKDLFDDGEKIEIEIDESFF 111
>gi|114152868|sp|P47910.2|RR31_SPIOL RecName: Full=30S ribosomal protein S31,
chloroplastic; AltName: Full=Plastid-specific 30S ribosomal protein 4;
Short=PSRP-4; Flags: Precursor
Length = 101
Score = 106 bits (264), Expect = 1e-021
Identities = 59/96 (61%), Positives = 72/96 (75%), Gaps = 8/96 (8%)
Frame = -2
Query: 456 MASLLLGAPPRVTVATSPRLLSSSHSET---LSLSCLPQQLSLSAS-SSSSSVPLVYCGR 289
MASLLLG P + S S SHS++ +SLS P LSLS+S S+S ++PL+YCGR
Sbjct: 1 MASLLLGTPSMACHSVS---FSFSHSQSVAGVSLSS-PPTLSLSSSVSTSPALPLIYCGR 56
Query: 288 GDRKTARGKRFNHSFGNARPRNKNKGRGPQRVPVPP 181
GDRKTA+GKRFNHSFGNARP+NKNKGRGP + P+ P
Sbjct: 57 GDRKTAKGKRFNHSFGNARPKNKNKGRGPPKAPIFP 92
>gi|194699530|gb|ACF83849.1| unknown [Zea mays]
Length = 122
Score = 105 bits (260), Expect = 4e-021
Identities = 57/120 (47%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
Frame = -2
Query: 459 AMASLLLGAPPRVTVATSPRLLSSSHSETLSLSCLPQ---QLSLSASSSSSSVPL--VYC 295
AM++ P A S + +SS++ S + P+ ++ A S++ P+ VYC
Sbjct: 2 AMSTAAAALPSHNHGAVSSYVSTSSYALAAS-AAFPRARAAFAVGAVLSATVTPVLDVYC 60
Query: 294 GRGDRKTARGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFENDEKIKIDIDESL 115
GRGD+KT RGKRFNHS+GNARPRNK KG GP R+ PPAPPRKD+F++ E I I+IDE +
Sbjct: 61 GRGDKKTKRGKRFNHSYGNARPRNKKKGTGPARLFAPPAPPRKDQFDDGEIISIEIDEDI 120
>gi|195611084|gb|ACG27372.1| PSRP4 [Zea mays]
Length = 130
Score = 105 bits (260), Expect = 4e-021
Identities = 57/120 (47%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
Frame = -2
Query: 459 AMASLLLGAPPRVTVATSPRLLSSSHSETLSLSCLPQ---QLSLSASSSSSSVPL--VYC 295
AM++ P A S + +SS++ S + P+ ++ A S++ P+ VYC
Sbjct: 10 AMSTAAAALPSHNHGAVSSYVSTSSYALAAS-AAFPRARAAFAVGAVLSATVTPVLDVYC 68
Query: 294 GRGDRKTARGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFENDEKIKIDIDESL 115
GRGD+KT RGKRFNHS+GNARPRNK KG GP R+ PPAPPRKD+F++ E I I+IDE +
Sbjct: 69 GRGDKKTKRGKRFNHSYGNARPRNKKKGTGPARLFAPPAPPRKDQFDDGEIISIEIDEDI 128
>gi|226499608|ref|NP_001148387.1| LOC100282000 [Zea mays]
Length = 130
Score = 104 bits (259), Expect = 5e-021
Identities = 59/129 (45%), Positives = 80/129 (62%), Gaps = 6/129 (4%)
Frame = -2
Query: 486 LLLLRQTFTAMASLLLGAPPRVTVATSPRLLSSSHSETLSLSCLPQQLSLSA-----SSS 322
+ LL AM++ P A S + +SS++ S + P+ + A S++
Sbjct: 1 MALLAVQGMAMSTAAAALPSHNHGAVSSYVSTSSYALAAS-AAFPRARAAFAVGTVLSAT 59
Query: 321 SSSVPLVYCGRGDRKTARGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFENDEK 142
+ V VYCGRGD+KT RGKRFNHS+GNARPRNK KG GP R+ PPAPPRKD+F++ E
Sbjct: 60 VTPVLDVYCGRGDKKTKRGKRFNHSYGNARPRNKKKGTGPARLFAPPAPPRKDQFDDGEI 119
Query: 141 IKIDIDESL 115
I I+IDE +
Sbjct: 120 ISIEIDEDI 128
>gi|115462461|ref|NP_001054830.1| Os05g0186000 [Oryza sativa Japonica Group]
Length = 126
Score = 104 bits (258), Expect = 7e-021
Identities = 48/79 (60%), Positives = 61/79 (77%), Gaps = 5/79 (6%)
Frame = -2
Query: 336 SASSSSSSVPL-----VYCGRGDRKTARGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPP 172
+A++++ S PL VYCGRGD+KT RGKRFNHS+GNARPRNK KG GP R+ PPAPP
Sbjct: 46 AAAAATLSAPLTPVLEVYCGRGDKKTKRGKRFNHSYGNARPRNKKKGTGPARLFAPPAPP 105
Query: 171 RKDKFENDEKIKIDIDESL 115
RKD+F++ E IDID+ +
Sbjct: 106 RKDQFDDGEVTPIDIDDDI 124
>gi|195638986|gb|ACG38961.1| PSRP4 [Zea mays]
Length = 132
Score = 94 bits (232), Expect = 7e-018
Identities = 51/108 (47%), Positives = 70/108 (64%), Gaps = 6/108 (5%)
Frame = -2
Query: 459 AMASLLLGAPPRVTVATSPRLLSSSHSETLSLSCLPQ---QLSLSASSSSSSVPL--VYC 295
AM++ P A S + +SS++ S + P+ ++ A S++ P+ VYC
Sbjct: 10 AMSTAAAALPSHNHGAVSSYVSTSSYALAAS-AAFPRARAAFAVGAVLSATVTPVLDVYC 68
Query: 294 GRGDRKTARGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPPRKDKFEN 151
GRGD+KT RGKRFNHS+GNARPRNK KG GP R+ PPAPPRKD+F++
Sbjct: 69 GRGDKKTKRGKRFNHSYGNARPRNKKKGTGPARLFAPPAPPRKDQFDD 116
>gi|168054110|ref|XP_001779476.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 109
Score = 83 bits (204), Expect = 1e-014
Identities = 47/106 (44%), Positives = 67/106 (63%), Gaps = 4/106 (3%)
Frame = -2
Query: 423 VTVATSPRLLSSSHSETLSLSCLPQQLSLSASSSSSSVPLVYCGRGDRKTARGKRFNHSF 244
V V +S SS+ + L + S S+SSSS S+P + CGRGD++TA+GKR SF
Sbjct: 5 VAVPSSLCCSSSTFFKALPMPSAAAVSSSSSSSSSVSLPAIVCGRGDKRTAKGKRARGSF 64
Query: 243 GNARPRNKNKGRGPQRVPVPPAPPR-KDKFENDEKIKIDIDESLFS 109
GN RP++ +KG G + + P PPR K + E+ E I ++IDESLF+
Sbjct: 65 GNCRPKDSSKGTG---LAITPLPPRTKKEVEDTEFINVEIDESLFN 107
>gi|168010083|ref|XP_001757734.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 75
Score = 74 bits (179), Expect = 1e-011
Identities = 38/75 (50%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Frame = -2
Query: 336 SASSSSSSVPLVYCGRGDRKTARGKRFNHSFGNARPRNKNKGRGPQRVPVPPAPPR-KDK 160
++S S S+P + CGRGDR+TA+GKR SFGN RP++ +KG G + V P PPR K +
Sbjct: 2 ASSCVSVSLPAIVCGRGDRRTAKGKRARGSFGNCRPKDSSKGTG---LAVTPLPPRTKKE 58
Query: 159 FENDEKIKIDIDESL 115
E+ E I ++IDESL
Sbjct: 59 VEDTEFINVEIDESL 73
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,837,552,758,913
Number of Sequences: 15229318
Number of Extensions: 4837552758913
Number of Successful Extensions: 1137592257
Number of sequences better than 0.0: 0
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