BLASTX 7.6.2
Query= UN43681 /QuerySize=689
(688 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297844442|ref|XP_002890102.1| hypothetical protein ARALYDRAFT... 155 7e-036
gi|5103837|gb|AAD39667.1|AC007591_32 Simalar to gi|4377403 Polyp... 150 2e-034
gi|18394237|ref|NP_563974.1| peptide deformylase 1A [Arabidopsis... 150 2e-034
gi|224054132|ref|XP_002298107.1| peptide deformylase [Populus tr... 138 1e-030
gi|317106741|dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas] 134 1e-029
gi|255553123|ref|XP_002517604.1| polypeptide deformylase, putati... 134 2e-029
gi|225442881|ref|XP_002281834.1| PREDICTED: hypothetical protein... 125 8e-027
gi|217073027|gb|ACJ84873.1| unknown [Medicago truncatula] 113 3e-023
gi|78101135|pdb|1ZXZ|A Chain A, X-Ray Structure Of Peptide Defor... 112 4e-023
gi|17433049|sp|Q9FUZ0.1|DEF1A_SOLLC RecName: Full=Peptide deform... 111 9e-023
gi|116783457|gb|ABK22950.1| unknown [Picea sitchensis] 94 1e-017
gi|87162608|gb|ABD28403.1| Formylmethionine deformylase [Medicag... 87 1e-015
gi|124359186|gb|ABD28402.2| Formylmethionine deformylase [Medica... 86 4e-015
gi|226510000|ref|NP_001140879.1| hypothetical protein LOC1002729... 85 9e-015
gi|255629341|gb|ACU15015.1| unknown [Glycine max] 83 3e-014
gi|226729275|sp|B6RGY0.1|DEF1A_ORYSJ RecName: Full=Peptide defor... 83 4e-014
gi|242046748|ref|XP_002461120.1| hypothetical protein SORBIDRAFT... 82 6e-014
gi|326489213|dbj|BAK01590.1| predicted protein [Hordeum vulgare ... 82 8e-014
gi|168014244|ref|XP_001759662.1| predicted protein [Physcomitrel... 79 5e-013
gi|168007592|ref|XP_001756492.1| predicted protein [Physcomitrel... 75 6e-012
>gi|297844442|ref|XP_002890102.1| hypothetical protein ARALYDRAFT_334826
[Arabidopsis lyrata subsp. lyrata]
Length = 270
Score = 155 bits (390), Expect = 7e-036
Identities = 84/104 (80%), Positives = 91/104 (87%), Gaps = 4/104 (3%)
Frame = +1
Query: 301 PVPR-FKTRFVEPNLYHL--SSSSSSLKTKAGWLLGLGDNKKKKVDLPDLVAAGDPVLHE 471
PV R + + LY+L SSSSSSL TKAGWLLGLG+ KKKKVDLP++VAAGDPVLHE
Sbjct: 36 PVSRPSSSHLLNRKLYNLPSSSSSSSLSTKAGWLLGLGE-KKKKVDLPEIVAAGDPVLHE 94
Query: 472 KAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
KAREVDPEEIGSERIQKIIDDM+KVMRLAPGVGLAAPQIGVPLR
Sbjct: 95 KAREVDPEEIGSERIQKIIDDMIKVMRLAPGVGLAAPQIGVPLR 138
>gi|5103837|gb|AAD39667.1|AC007591_32 Simalar to gi|4377403 Polypeptide
Deformylase from Chlamydia pneumoniae genome gb|AE001687 [Arabidopsis
thaliana]
Length = 259
Score = 150 bits (377), Expect = 2e-034
Identities = 78/89 (87%), Positives = 85/89 (95%), Gaps = 2/89 (2%)
Frame = +1
Query: 340 LYHL-SSSSSSLKTKAGWLLGLGDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERI 516
LY+L +SSSSSL TKAGWLLGLG+ KKKKVDLP++VA+GDPVLHEKAREVDP EIGSERI
Sbjct: 40 LYNLPTSSSSSLSTKAGWLLGLGE-KKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERI 98
Query: 517 QKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
QKIIDDM+KVMRLAPGVGLAAPQIGVPLR
Sbjct: 99 QKIIDDMIKVMRLAPGVGLAAPQIGVPLR 127
>gi|18394237|ref|NP_563974.1| peptide deformylase 1A [Arabidopsis thaliana]
Length = 269
Score = 150 bits (377), Expect = 2e-034
Identities = 78/89 (87%), Positives = 85/89 (95%), Gaps = 2/89 (2%)
Frame = +1
Query: 340 LYHL-SSSSSSLKTKAGWLLGLGDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERI 516
LY+L +SSSSSL TKAGWLLGLG+ KKKKVDLP++VA+GDPVLHEKAREVDP EIGSERI
Sbjct: 50 LYNLPTSSSSSLSTKAGWLLGLGE-KKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERI 108
Query: 517 QKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
QKIIDDM+KVMRLAPGVGLAAPQIGVPLR
Sbjct: 109 QKIIDDMIKVMRLAPGVGLAAPQIGVPLR 137
>gi|224054132|ref|XP_002298107.1| peptide deformylase [Populus trichocarpa]
Length = 299
Score = 138 bits (345), Expect = 1e-030
Identities = 74/115 (64%), Positives = 84/115 (73%), Gaps = 4/115 (3%)
Frame = +1
Query: 259 SSTPGFRRLDMLLNPVPRFKTRFVEPNLYHLSSSSSSLKTKAGWLLGLGDNKKKKVDLPD 438
++ P R +L P P F P+ S SSS KAGWLLG+G+ KKK LPD
Sbjct: 57 TTLPTIFRFTRMLVPKPEFMN--PNPHFTTRKSLSSSHTAKAGWLLGMGE--KKKTSLPD 112
Query: 439 LVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
+V AGDPVLHE AREVDP+EIGSERIQKIIDDMVKVMR+APGVGLAAPQIG+PLR
Sbjct: 113 IVKAGDPVLHEPAREVDPKEIGSERIQKIIDDMVKVMRMAPGVGLAAPQIGIPLR 167
>gi|317106741|dbj|BAJ53237.1| JHL06P13.18 [Jatropha curcas]
Length = 274
Score = 134 bits (337), Expect = 1e-029
Identities = 75/112 (66%), Positives = 83/112 (74%), Gaps = 12/112 (10%)
Frame = +1
Query: 295 LNPVPRF------KTRFVEPN---LYHLSSSSSSLKTKAGWLLGLGDNKKKKVDLPDLVA 447
L P+ RF K F+ N +H +S SSSL KAGW LGLG+ KKK PD+V
Sbjct: 34 LAPLSRFARMSISKPEFLSSNPKSTFH-NSFSSSLTAKAGWFLGLGE--KKKTSFPDIVK 90
Query: 448 AGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
AGDPVLHE AREVDPEEIGSERIQKIIDDM+K MR+APGVGLAAPQIGVPLR
Sbjct: 91 AGDPVLHEPAREVDPEEIGSERIQKIIDDMIKAMRMAPGVGLAAPQIGVPLR 142
>gi|255553123|ref|XP_002517604.1| polypeptide deformylase, putative [Ricinus
communis]
Length = 266
Score = 134 bits (335), Expect = 2e-029
Identities = 72/101 (71%), Positives = 78/101 (77%), Gaps = 2/101 (1%)
Frame = +1
Query: 301 PVPRFKTRFVEPNLYHLSSSSSSLKTKAGWLLGLGDNKKKKVDLPDLVAAGDPVLHEKAR 480
P+ + R P S SSS KAGWLLGLG+N KK+ LPD+V AGDPVLHE AR
Sbjct: 36 PISKPDFRTTIPYSITRKSLSSSSIAKAGWLLGLGEN--KKMSLPDIVKAGDPVLHEPAR 93
Query: 481 EVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
EVDP+EIGSERIQKIIDDMVKVMR APGVGLAAPQIGVPLR
Sbjct: 94 EVDPDEIGSERIQKIIDDMVKVMRRAPGVGLAAPQIGVPLR 134
>gi|225442881|ref|XP_002281834.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 277
Score = 125 bits (312), Expect = 8e-027
Identities = 63/87 (72%), Positives = 72/87 (82%), Gaps = 3/87 (3%)
Frame = +1
Query: 343 YHLSSSSSSLKTKAGWLLGLGDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQK 522
Y SSSSS+L AGW+LGLGD KK LP++V AGDPVLHE A+EV+P EIGS+RIQK
Sbjct: 62 YRPSSSSSTLIASAGWILGLGD---KKPALPEIVKAGDPVLHESAQEVEPGEIGSDRIQK 118
Query: 523 IIDDMVKVMRLAPGVGLAAPQIGVPLR 603
IIDDM+K MR APGVGLAAPQIG+PLR
Sbjct: 119 IIDDMIKAMRTAPGVGLAAPQIGIPLR 145
>gi|217073027|gb|ACJ84873.1| unknown [Medicago truncatula]
Length = 241
Score = 113 bits (281), Expect = 3e-023
Identities = 56/86 (65%), Positives = 70/86 (81%), Gaps = 2/86 (2%)
Frame = +1
Query: 352 SSSSSSLKTKAGWLLG--LGDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKI 525
SS +++++T+AG+ G D KKKK+DLPD V AGDPVLHE A+EVDP EI S+++QKI
Sbjct: 50 SSQNATIRTRAGFFFGRTKDDKKKKKMDLPDTVKAGDPVLHEPAQEVDPSEIMSDKVQKI 109
Query: 526 IDDMVKVMRLAPGVGLAAPQIGVPLR 603
IDDM++VMR APGVGLAAPQIGV R
Sbjct: 110 IDDMIRVMRKAPGVGLAAPQIGVSSR 135
>gi|78101135|pdb|1ZXZ|A Chain A, X-Ray Structure Of Peptide Deformylase From
Arabidopsis Thaliana (Atpdf1a); Crystals Grown In Peg-5000 Mme As
Precipitant
Length = 197
Score = 112 bits (280), Expect = 4e-023
Identities = 54/60 (90%), Positives = 59/60 (98%)
Frame = +1
Query: 424 VDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
+DLP++VA+GDPVLHEKAREVDP EIGSERIQKIIDDM+KVMRLAPGVGLAAPQIGVPLR
Sbjct: 1 MDLPEIVASGDPVLHEKAREVDPGEIGSERIQKIIDDMIKVMRLAPGVGLAAPQIGVPLR 60
>gi|17433049|sp|Q9FUZ0.1|DEF1A_SOLLC RecName: Full=Peptide deformylase 1A,
chloroplastic; Short=PDF 1A; AltName: Full=Polypeptide deformylase;
Flags: Precursor
Length = 277
Score = 111 bits (277), Expect = 9e-023
Identities = 55/80 (68%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = +1
Query: 364 SSLKTKAGWLLGLGDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVK 543
SS +AGW LGLG+ KKK +PD+V AGDPVLHE ++++ EEIGSERIQKII++MVK
Sbjct: 68 SSATARAGWFLGLGE--KKKQAMPDIVKAGDPVLHEPSQDIPLEEIGSERIQKIIEEMVK 125
Query: 544 VMRLAPGVGLAAPQIGVPLR 603
VMR APGVGLAAPQIG+PL+
Sbjct: 126 VMRNAPGVGLAAPQIGIPLK 145
>gi|116783457|gb|ABK22950.1| unknown [Picea sitchensis]
Length = 305
Score = 94 bits (233), Expect = 1e-017
Identities = 51/78 (65%), Positives = 57/78 (73%), Gaps = 4/78 (5%)
Frame = +1
Query: 382 AGWLLGLGDNK----KKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVM 549
AG G G K KKK LP++V AGDPVLHE A EV +EIGSERIQKIIDDM+ VM
Sbjct: 96 AGGFFGFGKKKTGFGKKKTVLPEIVQAGDPVLHECAAEVAVDEIGSERIQKIIDDMIAVM 155
Query: 550 RLAPGVGLAAPQIGVPLR 603
APG GLAAPQ+GVPL+
Sbjct: 156 WNAPGCGLAAPQLGVPLQ 173
>gi|87162608|gb|ABD28403.1| Formylmethionine deformylase [Medicago truncatula]
Length = 257
Score = 87 bits (215), Expect = 1e-015
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = +1
Query: 430 LPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
LP +V AGDPV+HE AREVD EI S++IQ IIDDM+ VMR APGVG+AAPQIG+PLR
Sbjct: 67 LPYIVKAGDPVIHEPAREVDHSEIKSDKIQNIIDDMILVMRKAPGVGVAAPQIGIPLR 124
>gi|124359186|gb|ABD28402.2| Formylmethionine deformylase [Medicago truncatula]
Length = 266
Score = 86 bits (211), Expect = 4e-015
Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 5/83 (6%)
Frame = +1
Query: 355 SSSSSLKTKAGWLLGLGDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDD 534
SS SS ++ +L +K K +LP +V AGDPVLHE AREVD EI S++IQKIID
Sbjct: 44 SSFSSASSETAFL-----SKTLKSELPHIVQAGDPVLHEPAREVDHSEINSDKIQKIIDG 98
Query: 535 MVKVMRLAPGVGLAAPQIGVPLR 603
M+ VMR APG+ L+A +IG+PLR
Sbjct: 99 MILVMRNAPGISLSAQKIGIPLR 121
>gi|226510000|ref|NP_001140879.1| hypothetical protein LOC100272955 [Zea mays]
Length = 256
Score = 85 bits (208), Expect = 9e-015
Identities = 46/78 (58%), Positives = 53/78 (67%), Gaps = 5/78 (6%)
Frame = +1
Query: 385 GWLLGL-----GDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVM 549
GWL GL G + P V AGDPVLHE A+EV P ++ SE++Q +ID MV VM
Sbjct: 47 GWLSGLLGGKGGGASTAMMVTPGTVKAGDPVLHEPAQEVAPGDVLSEKVQGVIDRMVDVM 106
Query: 550 RLAPGVGLAAPQIGVPLR 603
R APGVGLAAPQIGVPLR
Sbjct: 107 RRAPGVGLAAPQIGVPLR 124
>gi|255629341|gb|ACU15015.1| unknown [Glycine max]
Length = 223
Score = 83 bits (204), Expect = 3e-014
Identities = 41/58 (70%), Positives = 48/58 (82%)
Frame = +1
Query: 430 LPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
L +V AG+ VLH +A EV+ EI SER+QKIIDDMV+VMR APGVGLAAPQIG+PLR
Sbjct: 34 LAKIVKAGEAVLHSRAEEVEAIEIKSERVQKIIDDMVRVMRKAPGVGLAAPQIGIPLR 91
>gi|226729275|sp|B6RGY0.1|DEF1A_ORYSJ RecName: Full=Peptide deformylase 1A,
chloroplastic; Short=OsPDF1A; Short=PDF 1A; Flags: Precursor
Length = 260
Score = 83 bits (203), Expect = 4e-014
Identities = 48/89 (53%), Positives = 57/89 (64%), Gaps = 9/89 (10%)
Frame = +1
Query: 364 SSLKTKA---GWLLGL------GDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERI 516
SS++ A GWL GL G P V AGDPVLHE A++V P +I SE++
Sbjct: 40 SSVRASAGGGGWLSGLLGGKGGGGAPTAMTVTPGTVKAGDPVLHEPAQDVAPGDIPSEKV 99
Query: 517 QKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
Q +ID MV VMR APGVGLAAPQIGVPL+
Sbjct: 100 QGVIDRMVAVMRKAPGVGLAAPQIGVPLK 128
>gi|242046748|ref|XP_002461120.1| hypothetical protein SORBIDRAFT_02g041130
[Sorghum bicolor]
Length = 193
Score = 82 bits (201), Expect = 6e-014
Identities = 41/57 (71%), Positives = 46/57 (80%)
Frame = +1
Query: 433 PDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
P V AGDPVLHE A+EV P ++ SE++Q IID MV VMR APGVGLAAPQIGVPLR
Sbjct: 5 PGTVKAGDPVLHEPAQEVAPGDVRSEKVQGIIDRMVDVMRKAPGVGLAAPQIGVPLR 61
>gi|326489213|dbj|BAK01590.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 259
Score = 82 bits (200), Expect = 8e-014
Identities = 45/79 (56%), Positives = 51/79 (64%), Gaps = 6/79 (7%)
Frame = +1
Query: 385 GWLLGL------GDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKV 546
GWL GL G V AGDPVLHE A+EV P ++ SE+IQ IID M+ V
Sbjct: 49 GWLSGLLGRKGGGGAPMAMTVTLGTVKAGDPVLHEPAQEVSPGDVPSEKIQDIIDQMIAV 108
Query: 547 MRLAPGVGLAAPQIGVPLR 603
MR APGVGLAAPQIGVPL+
Sbjct: 109 MRKAPGVGLAAPQIGVPLK 127
>gi|168014244|ref|XP_001759662.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 194
Score = 79 bits (193), Expect = 5e-013
Identities = 39/55 (70%), Positives = 44/55 (80%)
Frame = +1
Query: 439 LVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
L AGDPVLHE A EV E+IGS RI+K I+DMV VMR PGVGLAAPQIG+PL+
Sbjct: 1 LAQAGDPVLHEPAEEVMREDIGSARIEKAINDMVDVMRAGPGVGLAAPQIGIPLQ 55
>gi|168007592|ref|XP_001756492.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 191
Score = 75 bits (184), Expect = 6e-012
Identities = 38/54 (70%), Positives = 42/54 (77%)
Frame = +1
Query: 442 VAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
V AGDPVLH+ A EV E IGS I+K I+DMV VMR PGVGLAAPQIGVPL+
Sbjct: 1 VQAGDPVLHKPAEEVKRENIGSSLIEKTINDMVDVMRAGPGVGLAAPQIGVPLQ 54
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,837,552,758,913
Number of Sequences: 15229318
Number of Extensions: 4837552758913
Number of Successful Extensions: 1137592257
Number of sequences better than 0.0: 0
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