BLASTX 7.6.2
Query= UN43681 /QuerySize=689
(688 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9FV53|DEF1A_ARATH Peptide deformylase 1A, chloroplastic OS=A... 150 1e-035
sp|Q9FUZ0|DEF1A_SOLLC Peptide deformylase 1A, chloroplastic OS=S... 111 4e-024
sp|B6RGY0|DEF1A_ORYSJ Peptide deformylase 1A, chloroplastic OS=O... 83 2e-015
sp|Q7NJV3|DEF1_GLOVI Peptide deformylase 1 OS=Gloeobacter violac... 59 3e-008
sp|B0SHH1|DEF_LEPBA Peptide deformylase OS=Leptospira biflexa se... 51 6e-006
sp|B0SQM2|DEF_LEPBP Peptide deformylase OS=Leptospira biflexa se... 51 6e-006
sp|Q72S74|DEF_LEPIC Peptide deformylase OS=Leptospira interrogan... 51 7e-006
sp|Q93LE9|DEF_LEPIN Peptide deformylase OS=Leptospira interrogan... 51 7e-006
sp|Q3Z8F6|DEF_DEHE1 Peptide deformylase OS=Dehalococcoides ethen... 50 9e-006
>sp|Q9FV53|DEF1A_ARATH Peptide deformylase 1A, chloroplastic OS=Arabidopsis
thaliana GN=PDF1A PE=1 SV=2
Length = 259
Score = 150 bits (377), Expect = 1e-035
Identities = 78/89 (87%), Positives = 85/89 (95%), Gaps = 2/89 (2%)
Frame = +1
Query: 340 LYHL-SSSSSSLKTKAGWLLGLGDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERI 516
LY+L +SSSSSL TKAGWLLGLG+ KKKKVDLP++VA+GDPVLHEKAREVDP EIGSERI
Sbjct: 40 LYNLPTSSSSSLSTKAGWLLGLGE-KKKKVDLPEIVASGDPVLHEKAREVDPGEIGSERI 98
Query: 517 QKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
QKIIDDM+KVMRLAPGVGLAAPQIGVPLR
Sbjct: 99 QKIIDDMIKVMRLAPGVGLAAPQIGVPLR 127
Score = 53 bits (125), Expect = 2e-006
Identities = 26/36 (72%), Positives = 30/36 (83%)
Frame = +2
Query: 233 MATIFRFSLRLLPVSAALTCCSIRFPDSRPASLNLI 340
M T+FR SLRLLPVSAA+TC SIRFP SRP S +L+
Sbjct: 1 METLFRVSLRLLPVSAAVTCRSIRFPVSRPGSSHLL 36
>sp|Q9FUZ0|DEF1A_SOLLC Peptide deformylase 1A, chloroplastic OS=Solanum
lycopersicum GN=PDF1A PE=2 SV=1
Length = 277
Score = 111 bits (277), Expect = 4e-024
Identities = 55/80 (68%), Positives = 67/80 (83%), Gaps = 2/80 (2%)
Frame = +1
Query: 364 SSLKTKAGWLLGLGDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVK 543
SS +AGW LGLG+ KKK +PD+V AGDPVLHE ++++ EEIGSERIQKII++MVK
Sbjct: 68 SSATARAGWFLGLGE--KKKQAMPDIVKAGDPVLHEPSQDIPLEEIGSERIQKIIEEMVK 125
Query: 544 VMRLAPGVGLAAPQIGVPLR 603
VMR APGVGLAAPQIG+PL+
Sbjct: 126 VMRNAPGVGLAAPQIGIPLK 145
>sp|B6RGY0|DEF1A_ORYSJ Peptide deformylase 1A, chloroplastic OS=Oryza sativa
subsp. japonica GN=PDF1A PE=2 SV=1
Length = 260
Score = 83 bits (203), Expect = 2e-015
Identities = 48/89 (53%), Positives = 57/89 (64%), Gaps = 9/89 (10%)
Frame = +1
Query: 364 SSLKTKA---GWLLGL------GDNKKKKVDLPDLVAAGDPVLHEKAREVDPEEIGSERI 516
SS++ A GWL GL G P V AGDPVLHE A++V P +I SE++
Sbjct: 40 SSVRASAGGGGWLSGLLGGKGGGGAPTAMTVTPGTVKAGDPVLHEPAQDVAPGDIPSEKV 99
Query: 517 QKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
Q +ID MV VMR APGVGLAAPQIGVPL+
Sbjct: 100 QGVIDRMVAVMRKAPGVGLAAPQIGVPLK 128
>sp|Q7NJV3|DEF1_GLOVI Peptide deformylase 1 OS=Gloeobacter violaceus GN=def1
PE=3 SV=1
Length = 227
Score = 59 bits (140), Expect = 3e-008
Identities = 29/56 (51%), Positives = 41/56 (73%)
Frame = +1
Query: 436 DLVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
++V GDPVL A+ ++ +EI SE IQ++I M + MR APGVGLAAPQ+GV ++
Sbjct: 47 EIVKTGDPVLRLTAKPLNSDEIQSEAIQQLIAAMAERMREAPGVGLAAPQVGVSVQ 102
>sp|B0SHH1|DEF_LEPBA Peptide deformylase OS=Leptospira biflexa serovar Patoc
(strain Patoc 1 / Ames) GN=def PE=3 SV=1
Length = 179
Score = 51 bits (121), Expect = 6e-006
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +1
Query: 439 LVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGV 594
++ G+P+L + + +V EI ++ +K+I DM + MR A GVGLAAPQIGV
Sbjct: 6 ILKIGNPILRQTSEDVSESEIQTKDFKKLIRDMFETMRHADGVGLAAPQIGV 57
>sp|B0SQM2|DEF_LEPBP Peptide deformylase OS=Leptospira biflexa serovar Patoc
(strain Patoc 1 / ATCC 23582 / Paris) GN=def PE=3 SV=1
Length = 179
Score = 51 bits (121), Expect = 6e-006
Identities = 24/52 (46%), Positives = 36/52 (69%)
Frame = +1
Query: 439 LVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGV 594
++ G+P+L + + +V EI ++ +K+I DM + MR A GVGLAAPQIGV
Sbjct: 6 ILKIGNPILRQTSEDVSESEIQTKDFKKLIRDMFETMRHADGVGLAAPQIGV 57
>sp|Q72S74|DEF_LEPIC Peptide deformylase OS=Leptospira interrogans serogroup
Icterohaemorrhagiae serovar copenhageni GN=def PE=3 SV=1
Length = 178
Score = 51 bits (120), Expect = 7e-006
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +1
Query: 439 LVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGV 594
++ GDP+L + + V +EI ++ +K+I DM MR A GVGLAAPQIG+
Sbjct: 6 ILRMGDPILRKISEPVTEDEIQTKEFKKLIRDMFDTMRHAEGVGLAAPQIGI 57
>sp|Q93LE9|DEF_LEPIN Peptide deformylase OS=Leptospira interrogans GN=def PE=1
SV=1
Length = 178
Score = 51 bits (120), Expect = 7e-006
Identities = 24/52 (46%), Positives = 35/52 (67%)
Frame = +1
Query: 439 LVAAGDPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGV 594
++ GDP+L + + V +EI ++ +K+I DM MR A GVGLAAPQIG+
Sbjct: 6 ILRMGDPILRKISEPVTEDEIQTKEFKKLIRDMFDTMRHAEGVGLAAPQIGI 57
>sp|Q3Z8F6|DEF_DEHE1 Peptide deformylase OS=Dehalococcoides ethenogenes (strain
195) GN=def PE=3 SV=1
Length = 167
Score = 50 bits (119), Expect = 9e-006
Identities = 27/50 (54%), Positives = 37/50 (74%), Gaps = 3/50 (6%)
Frame = +1
Query: 454 DPVLHEKAREVDPEEIGSERIQKIIDDMVKVMRLAPGVGLAAPQIGVPLR 603
+P+L +KA++V P GS IQ +IDDM++ M+ A G GLAAPQ+GV LR
Sbjct: 11 EPILRKKAKKV-PSIDGS--IQTLIDDMIETMKSADGAGLAAPQVGVSLR 57
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,919,208,508
Number of Sequences: 518415
Number of Extensions: 167919208508
Number of Successful Extensions: 1034094832
Number of sequences better than 0.0: 0
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