BLASTX 7.6.2
Query= UN43711 /QuerySize=751
(750 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G53330.1 | Symbols: | FUNCTIONS IN: molecular... 294 7e-080
TAIR9_protein||AT1G62440.1 | Symbols: LRX2 | LRX2 (LEUCINE-RICH ... 57 1e-008
>TAIR9_protein||AT5G53330.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Ubiquitin-associated/translation elongation factor EF1B, N-terminal,
eukaryote (InterPro:IPR015940); Has 28 Blast hits to 28 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 11; Fungi - 2; Plants -
15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr5:21639236-21640716 FORWARD
Length = 222
Score = 294 bits (750), Expect = 7e-080
Identities = 161/224 (71%), Positives = 175/224 (78%), Gaps = 20/224 (8%)
Frame = +3
Query: 27 MGYDFRNKS-GPSYGRPMY--PSPSPSSMYTGPP-GYPKIG---GGQPFFPPPPERTPSF 185
M YD+RNKS GPSY RPMY PS SPS P GYPKIG G P F PPER SF
Sbjct: 1 MDYDYRNKSGGPSYPRPMYGPPSTSPSPSSNHPMYGYPKIGQQTGPGPQFFSPPERNSSF 60
Query: 186 QHNPSPSSSGLGIKVTLKPDYRITPPPPLLPRVGDVPRSSFQFDFGLERKVLAEAEKDNP 365
QHN SP SSG+GI+V LKP+YRITPPP LLPRVGD+ RSSFQFDFGLERKVLAEAEKDNP
Sbjct: 61 QHNTSP-SSGIGIRVNLKPEYRITPPPQLLPRVGDIHRSSFQFDFGLERKVLAEAEKDNP 119
Query: 366 DWSKFGSDHPPPPPPPANFSQPPPANFAQPPPAHSMGVDPVVMKY--AGLNREAVNIAVA 539
DWSKFGS++ PPA F +P P++ Q GVD VVMKY +GLNREAVNIAVA
Sbjct: 120 DWSKFGSEN-----PPAKFHEPSPSSVGQ-----MQGVDHVVMKYTASGLNREAVNIAVA 169
Query: 540 NYGDNPTKVHEFANGFSAIREMGFPTNAVADALFMFENDTEEAL 671
NYGDNPTKV EFANGF+AIREMGFPTNAVADALFMFENDT++AL
Sbjct: 170 NYGDNPTKVQEFANGFTAIREMGFPTNAVADALFMFENDTDKAL 213
Score = 145 bits (365), Expect = 3e-035
Identities = 74/97 (76%), Positives = 82/97 (84%), Gaps = 5/97 (5%)
Frame = +3
Query: 423 SQPPPANFAQPPPA---HSMGVDPVVMKY--AGLNREAVNIAVANYGDNPTKVHEFANGF 587
S+ PPA F +P P+ GVD VVMKY +GLNREAVNIAVANYGDNPTKV EFANGF
Sbjct: 126 SENPPAKFHEPSPSSVGQMQGVDHVVMKYTASGLNREAVNIAVANYGDNPTKVQEFANGF 185
Query: 588 SAIREMGFPTNAVADALFMFENDTEEALSHLLHGSS* 698
+AIREMGFPTNAVADALFMFENDT++AL+HLLHGSS*
Sbjct: 186 TAIREMGFPTNAVADALFMFENDTDKALAHLLHGSS* 222
>TAIR9_protein||AT1G62440.1 | Symbols: LRX2 | LRX2 (LEUCINE-RICH REPEAT/EXTENSIN
2); protein binding / structural constituent of cell wall |
chr1:23111818-23115293 FORWARD
Length = 827
Score = 57 bits (136), Expect = 1e-008
Identities = 50/161 (31%), Positives = 67/161 (41%), Gaps = 26/161 (16%)
Frame = +3
Query: 63 YGRPMYPSPSPSSMYTGP-----PGYPKIGGGQPFF---PPPP--ERTPSFQHNPSPSSS 212
+G + SP P S P P P P F PPPP + +PSF+ P P SS
Sbjct: 417 FGCNNFFSPPPPSFKMSPTVRVLPPPPPSSKMSPTFRATPPPPSSKMSPSFRATPPPPSS 476
Query: 213 GLGIKVTLKPDYRITPPPP---LLPRVGDVPRSSFQFDFGLERKVLAEAEKDNPDWSKFG 383
+ P +R TPPPP + P V P ++ E + + +P +
Sbjct: 477 ------KMSPSFRATPPPPSSKMSPSVKAYPPPPPPPEY--EPSPPPPSSEMSPSVRAYP 528
Query: 384 -----SDHPPPPPPPANFSQPPPANFAQPPPAHSMGVDPVV 491
S PP PPPP +S PPP + + PPP PVV
Sbjct: 529 PPPPLSPPPPSPPPPYIYSSPPPPSPSPPPPYIYSSPPPVV 569
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,295,014,916
Number of Sequences: 33410
Number of Extensions: 21295014916
Number of Successful Extensions: 670053385
Number of sequences better than 0.0: 0
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