BLASTX 7.6.2
Query= UN43788 /QuerySize=943
(942 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G07565.1 | Symbols: | DNA binding | chr3:2413... 119 4e-027
TAIR9_protein||AT3G07565.2 | Symbols: | DNA binding | chr3:2413... 119 4e-027
TAIR9_protein||AT3G07565.3 | Symbols: | DNA binding | chr3:2413... 119 4e-027
TAIR9_protein||AT1G10820.1 | Symbols: | unknown protein | chr1:... 50 1e-006
TAIR9_protein||AT1G10820.2 | Symbols: | unknown protein | chr1:... 50 1e-006
TAIR9_protein||AT1G60670.1 | Symbols: | INVOLVED IN: biological... 49 5e-006
TAIR9_protein||AT1G60670.2 | Symbols: | unknown protein | chr1:... 49 5e-006
>TAIR9_protein||AT3G07565.1 | Symbols: | DNA binding | chr3:2413823-2415872
FORWARD
Length = 259
Score = 119 bits (296), Expect = 4e-027
Identities = 67/99 (67%), Positives = 75/99 (75%), Gaps = 5/99 (5%)
Frame = -3
Query: 940 MAASANPPGNNQEGTSAAQKVTSSSPAAA-VATNGAVDNGGNK-AAADNSETISALRHNP 767
MAASANP GNNQEG+SA QKV+SSS AAA A +VDNGGN AAADNS+TI ALRHNP
Sbjct: 1 MAASANPSGNNQEGSSATQKVSSSSAAAANGAAVNSVDNGGNTGAAADNSQTIGALRHNP 60
Query: 766 GISVDWTHEEQSLLEDLLAKY---PPFYRFFAFDVKVSD 659
GIS DWT EEQSLLEDLL KY P +R+ +K+ D
Sbjct: 61 GISTDWTLEEQSLLEDLLVKYATEPSVFRYAKIAMKMKD 99
Score = 66 bits (159), Expect = 3e-011
Identities = 28/36 (77%), Positives = 34/36 (94%)
Frame = -2
Query: 464 IYRYASEPTIVRYAKISMKMKDKTVRDVALRCRWMT 357
+ +YA+EP++ RYAKI+MKMKDKTVRDVALRCRWMT
Sbjct: 78 LVKYATEPSVFRYAKIAMKMKDKTVRDVALRCRWMT 113
>TAIR9_protein||AT3G07565.2 | Symbols: | DNA binding | chr3:2413823-2415240
FORWARD
Length = 193
Score = 119 bits (296), Expect = 4e-027
Identities = 67/99 (67%), Positives = 75/99 (75%), Gaps = 5/99 (5%)
Frame = -3
Query: 940 MAASANPPGNNQEGTSAAQKVTSSSPAAA-VATNGAVDNGGNK-AAADNSETISALRHNP 767
MAASANP GNNQEG+SA QKV+SSS AAA A +VDNGGN AAADNS+TI ALRHNP
Sbjct: 1 MAASANPSGNNQEGSSATQKVSSSSAAAANGAAVNSVDNGGNTGAAADNSQTIGALRHNP 60
Query: 766 GISVDWTHEEQSLLEDLLAKY---PPFYRFFAFDVKVSD 659
GIS DWT EEQSLLEDLL KY P +R+ +K+ D
Sbjct: 61 GISTDWTLEEQSLLEDLLVKYATEPSVFRYAKIAMKMKD 99
Score = 66 bits (159), Expect = 3e-011
Identities = 28/36 (77%), Positives = 34/36 (94%)
Frame = -2
Query: 464 IYRYASEPTIVRYAKISMKMKDKTVRDVALRCRWMT 357
+ +YA+EP++ RYAKI+MKMKDKTVRDVALRCRWMT
Sbjct: 78 LVKYATEPSVFRYAKIAMKMKDKTVRDVALRCRWMT 113
>TAIR9_protein||AT3G07565.3 | Symbols: | DNA binding | chr3:2413823-2415872
FORWARD
Length = 260
Score = 119 bits (296), Expect = 4e-027
Identities = 67/99 (67%), Positives = 75/99 (75%), Gaps = 5/99 (5%)
Frame = -3
Query: 940 MAASANPPGNNQEGTSAAQKVTSSSPAAA-VATNGAVDNGGNK-AAADNSETISALRHNP 767
MAASANP GNNQEG+SA QKV+SSS AAA A +VDNGGN AAADNS+TI ALRHNP
Sbjct: 1 MAASANPSGNNQEGSSATQKVSSSSAAAANGAAVNSVDNGGNTGAAADNSQTIGALRHNP 60
Query: 766 GISVDWTHEEQSLLEDLLAKY---PPFYRFFAFDVKVSD 659
GIS DWT EEQSLLEDLL KY P +R+ +K+ D
Sbjct: 61 GISTDWTLEEQSLLEDLLVKYATEPSVFRYAKIAMKMKD 99
Score = 66 bits (159), Expect = 3e-011
Identities = 28/36 (77%), Positives = 34/36 (94%)
Frame = -2
Query: 464 IYRYASEPTIVRYAKISMKMKDKTVRDVALRCRWMT 357
+ +YA+EP++ RYAKI+MKMKDKTVRDVALRCRWMT
Sbjct: 78 LVKYATEPSVFRYAKIAMKMKDKTVRDVALRCRWMT 113
>TAIR9_protein||AT1G10820.1 | Symbols: | unknown protein | chr1:3601437-3604650
REVERSE
Length = 233
Score = 50 bits (119), Expect = 1e-006
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
Frame = -2
Query: 497 SLVNDWCL---YIY---IYRYASEPTIVRYAKISMKMKDKTVRDVALRCRWMT 357
+LV DW + Y+ + + EP I +Y KI+ + DKTVRDVALRCRWMT
Sbjct: 27 ALVMDWSVEEQYVLENGLAKLKDEPKISKYVKIAATLPDKTVRDVALRCRWMT 79
>TAIR9_protein||AT1G10820.2 | Symbols: | unknown protein | chr1:3601437-3604650
REVERSE
Length = 259
Score = 50 bits (119), Expect = 1e-006
Identities = 26/53 (49%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
Frame = -2
Query: 497 SLVNDWCL---YIY---IYRYASEPTIVRYAKISMKMKDKTVRDVALRCRWMT 357
+LV DW + Y+ + + EP I +Y KI+ + DKTVRDVALRCRWMT
Sbjct: 53 ALVMDWSVEEQYVLENGLAKLKDEPKISKYVKIAATLPDKTVRDVALRCRWMT 105
>TAIR9_protein||AT1G60670.1 | Symbols: | INVOLVED IN: biological_process
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth
stages; CONTAINS InterPro DOMAIN/s: Homeodomain-like
(InterPro:IPR009057); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G10820.2); Has 83 Blast hits to 83 proteins in
12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
77; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
chr1:22344099-22346773 FORWARD
Length = 202
Score = 49 bits (114), Expect = 5e-006
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
Frame = -2
Query: 497 SLVNDWCL---YIY---IYRYASEPTIVRYAKISMKMKDKTVRDVALRCRWMT 357
SL DW + YI + ++ EP + +Y KI+ + DK+VRDVA+RC+WMT
Sbjct: 49 SLAVDWSVEEQYILEKGLSKFKDEPQVTKYVKIAATLPDKSVRDVAMRCKWMT 101
>TAIR9_protein||AT1G60670.2 | Symbols: | unknown protein |
chr1:22344099-22347140 FORWARD
Length = 255
Score = 49 bits (114), Expect = 5e-006
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 6/53 (11%)
Frame = -2
Query: 497 SLVNDWCL---YIY---IYRYASEPTIVRYAKISMKMKDKTVRDVALRCRWMT 357
SL DW + YI + ++ EP + +Y KI+ + DK+VRDVA+RC+WMT
Sbjct: 49 SLAVDWSVEEQYILEKGLSKFKDEPQVTKYVKIAATLPDKSVRDVAMRCKWMT 101
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,340,215,564
Number of Sequences: 33410
Number of Extensions: 21340215564
Number of Successful Extensions: 670064450
Number of sequences better than 0.0: 0
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