BLASTX 7.6.2
Query= UN43815 /QuerySize=709
(708 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:130... 140 1e-033
TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative | ... 132 2e-031
TAIR9_protein||AT2G18050.1 | Symbols: HIS1-3 | HIS1-3 (HISTONE H... 86 2e-017
TAIR9_protein||AT2G18050.2 | Symbols: HIS1-3 | HIS1-3 (HISTONE H... 64 1e-010
TAIR9_protein||AT1G14900.1 | Symbols: HMGA | HMGA (HIGH MOBILITY... 51 5e-007
>TAIR9_protein||AT2G30620.1 | Symbols: | histone H1.2 | chr2:13045360-13046267
FORWARD
Length = 274
Score = 140 bits (351), Expect = 1e-033
Identities = 76/114 (66%), Positives = 85/114 (74%)
Frame = -2
Query: 665 ERERCRQRKKAKKTKEAKAPKKKPAAKAPRKRSSSSSHPTYEEMIKDAITTLKERTGSSQ 486
E++ + K+KKT AKA KK A AP K+ ++SSHPTYEEMIKDAI TLKERTGSSQ
Sbjct: 25 EKKPAAKGGKSKKTTTAKATKKPVKAAAPTKKKTTSSHPTYEEMIKDAIVTLKERTGSSQ 84
Query: 485 YAIQKLIEEKQKTLPPTFRKLLLVNLKRLVASGKLVKVKGCSSC*ESRSGCN*K 324
YAIQK IEEK K+LPPTFRKLLLVNLKRLVAS KLVKVK +RS K
Sbjct: 85 YAIQKFIEEKHKSLPPTFRKLLLVNLKRLVASEKLVKVKASFKIPSARSAATPK 138
>TAIR9_protein||AT1G06760.1 | Symbols: | histone H1, putative |
chr1:2076687-2077616 REVERSE
Length = 275
Score = 132 bits (332), Expect = 2e-031
Identities = 72/99 (72%), Positives = 81/99 (81%), Gaps = 3/99 (3%)
Frame = -2
Query: 665 ERERCRQRKKAKKTKEAKAPKKKPAAKAPRKRSSSSSHPTYEEMIKDAITTLKERTGSSQ 486
E++ + +K K KE K +KK A AP+KR + SSHPTYEEMIKDAI TLKERTGSSQ
Sbjct: 28 EKKPAAKGRKTKNVKEVK--EKKTVAAAPKKR-TVSSHPTYEEMIKDAIVTLKERTGSSQ 84
Query: 485 YAIQKLIEEKQKTLPPTFRKLLLVNLKRLVASGKLVKVK 369
YAIQK IEEK+K LPPTFRKLLL+NLKRLVASGKLVKVK
Sbjct: 85 YAIQKFIEEKRKELPPTFRKLLLLNLKRLVASGKLVKVK 123
>TAIR9_protein||AT2G18050.1 | Symbols: HIS1-3 | HIS1-3 (HISTONE H1-3); DNA
binding / nucleosomal DNA binding | chr2:7846095-7846670 FORWARD
Length = 168
Score = 86 bits (212), Expect = 2e-017
Identities = 48/85 (56%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
Frame = -2
Query: 620 EAKAPKKKPAAKAPRKRSSSSSHPTYEEMIKDAITTLKERTGSSQYAIQKLIEEKQKT-L 444
E K KK PAAK PRK +++HP Y +MIK+A+ LKE+ GSS YAI K IEEK K+ L
Sbjct: 3 EDKILKKTPAAKKPRK-PKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLL 61
Query: 443 PPTFRKLLLVNLKRLVASGKLVKVK 369
P +FRK L + LK VA GKLVK++
Sbjct: 62 PESFRKTLSLQLKNSVAKGKLVKIR 86
>TAIR9_protein||AT2G18050.2 | Symbols: HIS1-3 | HIS1-3 (HISTONE H1-3); DNA
binding / nucleosomal DNA binding | chr2:7846254-7846670 FORWARD
Length = 139
Score = 64 bits (153), Expect = 1e-010
Identities = 34/57 (59%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Frame = -2
Query: 536 MIKDAITTLKERTGSSQYAIQKLIEEKQKT-LPPTFRKLLLVNLKRLVASGKLVKVK 369
MIK+A+ LKE+ GSS YAI K IEEK K+ LP +FRK L + LK VA GKLVK++
Sbjct: 1 MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIR 57
>TAIR9_protein||AT1G14900.1 | Symbols: HMGA | HMGA (HIGH MOBILITY GROUP A); DNA
binding | chr1:5138665-5139353 REVERSE
Length = 205
Score = 51 bits (121), Expect = 5e-007
Identities = 26/65 (40%), Positives = 41/65 (63%)
Frame = -2
Query: 563 SSSHPTYEEMIKDAITTLKERTGSSQYAIQKLIEEKQKTLPPTFRKLLLVNLKRLVASGK 384
S S P Y +MI +AI +L ++ G ++ I K IE Q+TLPP+ LL +L ++ +G+
Sbjct: 20 SFSLPPYPQMIMEAIESLNDKNGCNKTTIAKHIESTQQTLPPSHMTLLSYHLNQMKKTGQ 79
Query: 383 LVKVK 369
L+ VK
Sbjct: 80 LIMVK 84
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,340,215,564
Number of Sequences: 33410
Number of Extensions: 21340215564
Number of Successful Extensions: 670064450
Number of sequences better than 0.0: 0
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