Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN43819


BLASTX 7.6.2

Query= UN43819 /QuerySize=429
        (428 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT2G45070.1 | Symbols: SEC61 BETA | SEC61 BETA; p...    145   1e-035
TAIR9_protein||AT2G45070.2 | Symbols: SEC61 BETA | SEC61 BETA; p...    145   1e-035
TAIR9_protein||AT2G45070.3 | Symbols: SEC61 BETA | SEC61 BETA; p...    145   1e-035
TAIR9_protein||AT2G45070.4 | Symbols: SEC61 BETA | SEC61 BETA; p...    145   1e-035
TAIR9_protein||AT3G60540.1 | Symbols:  | sec61beta family protei...    138   1e-033
TAIR9_protein||AT3G60540.2 | Symbols:  | sec61beta family protei...    138   1e-033
TAIR9_protein||AT5G60460.1 | Symbols:  | sec61beta family protei...     99   9e-022

>TAIR9_protein||AT2G45070.1 | Symbols: SEC61 BETA | SEC61 BETA; protein
        transporter | chr2:18587208-18587456 REVERSE

          Length = 83

 Score =  145 bits (365), Expect = 1e-035
 Identities = 74/83 (89%), Positives = 76/83 (91%), Gaps = 1/83 (1%)
 Frame = -2

Query: 349 MVGSGAPQRGSAAAAASMRRRKP-SGSGGASGGGGAAGSMLQFYTDDAPGLKISPNVVLV 173
           MVGSGAPQRGSAAA ASMRRRKP SG+GG    GGAAGSMLQFYTDDAPGLKISPNVVL+
Sbjct:   1 MVGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLI 60

Query: 172 MSIGFIAFVAVLHVMGKLYFVK* 104
           MSIGFIAFVAVLHVMGKLYFVK*
Sbjct:  61 MSIGFIAFVAVLHVMGKLYFVK* 83

>TAIR9_protein||AT2G45070.2 | Symbols: SEC61 BETA | SEC61 BETA; protein
        transporter | chr2:18587208-18587456 REVERSE

          Length = 83

 Score =  145 bits (365), Expect = 1e-035
 Identities = 74/83 (89%), Positives = 76/83 (91%), Gaps = 1/83 (1%)
 Frame = -2

Query: 349 MVGSGAPQRGSAAAAASMRRRKP-SGSGGASGGGGAAGSMLQFYTDDAPGLKISPNVVLV 173
           MVGSGAPQRGSAAA ASMRRRKP SG+GG    GGAAGSMLQFYTDDAPGLKISPNVVL+
Sbjct:   1 MVGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLI 60

Query: 172 MSIGFIAFVAVLHVMGKLYFVK* 104
           MSIGFIAFVAVLHVMGKLYFVK*
Sbjct:  61 MSIGFIAFVAVLHVMGKLYFVK* 83

>TAIR9_protein||AT2G45070.3 | Symbols: SEC61 BETA | SEC61 BETA; protein
        transporter | chr2:18587208-18587456 REVERSE

          Length = 83

 Score =  145 bits (365), Expect = 1e-035
 Identities = 74/83 (89%), Positives = 76/83 (91%), Gaps = 1/83 (1%)
 Frame = -2

Query: 349 MVGSGAPQRGSAAAAASMRRRKP-SGSGGASGGGGAAGSMLQFYTDDAPGLKISPNVVLV 173
           MVGSGAPQRGSAAA ASMRRRKP SG+GG    GGAAGSMLQFYTDDAPGLKISPNVVL+
Sbjct:   1 MVGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLI 60

Query: 172 MSIGFIAFVAVLHVMGKLYFVK* 104
           MSIGFIAFVAVLHVMGKLYFVK*
Sbjct:  61 MSIGFIAFVAVLHVMGKLYFVK* 83

>TAIR9_protein||AT2G45070.4 | Symbols: SEC61 BETA | SEC61 BETA; protein
        transporter | chr2:18587208-18587456 REVERSE

          Length = 83

 Score =  145 bits (365), Expect = 1e-035
 Identities = 74/83 (89%), Positives = 76/83 (91%), Gaps = 1/83 (1%)
 Frame = -2

Query: 349 MVGSGAPQRGSAAAAASMRRRKP-SGSGGASGGGGAAGSMLQFYTDDAPGLKISPNVVLV 173
           MVGSGAPQRGSAAA ASMRRRKP SG+GG    GGAAGSMLQFYTDDAPGLKISPNVVL+
Sbjct:   1 MVGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLI 60

Query: 172 MSIGFIAFVAVLHVMGKLYFVK* 104
           MSIGFIAFVAVLHVMGKLYFVK*
Sbjct:  61 MSIGFIAFVAVLHVMGKLYFVK* 83

>TAIR9_protein||AT3G60540.1 | Symbols:  | sec61beta family protein |
        chr3:22375132-22375377 REVERSE

          Length = 82

 Score =  138 bits (347), Expect = 1e-033
 Identities = 70/81 (86%), Positives = 74/81 (91%), Gaps = 2/81 (2%)
 Frame = -2

Query: 349 MVGSGAPQRGSAAAAASMRRRKPSGSGGASGGGGAAGSMLQFYTDDAPGLKISPNVVLVM 170
           MVG GAPQRGSAAA ASMRRRKP  +GG+S  GG AG+MLQFYTDDAPGLKISPNVVL+M
Sbjct:   1 MVGGGAPQRGSAAATASMRRRKP--AGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIM 58

Query: 169 SIGFIAFVAVLHVMGKLYFVK 107
           SIGFIAFVAVLHVMGKLYFVK
Sbjct:  59 SIGFIAFVAVLHVMGKLYFVK 79

>TAIR9_protein||AT3G60540.2 | Symbols:  | sec61beta family protein |
        chr3:22375132-22375377 REVERSE

          Length = 82

 Score =  138 bits (347), Expect = 1e-033
 Identities = 70/81 (86%), Positives = 74/81 (91%), Gaps = 2/81 (2%)
 Frame = -2

Query: 349 MVGSGAPQRGSAAAAASMRRRKPSGSGGASGGGGAAGSMLQFYTDDAPGLKISPNVVLVM 170
           MVG GAPQRGSAAA ASMRRRKP  +GG+S  GG AG+MLQFYTDDAPGLKISPNVVL+M
Sbjct:   1 MVGGGAPQRGSAAATASMRRRKP--AGGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIM 58

Query: 169 SIGFIAFVAVLHVMGKLYFVK 107
           SIGFIAFVAVLHVMGKLYFVK
Sbjct:  59 SIGFIAFVAVLHVMGKLYFVK 79

>TAIR9_protein||AT5G60460.1 | Symbols:  | sec61beta family protein |
        chr5:24317590-24317919 REVERSE

          Length = 110

 Score =  99 bits (245), Expect = 9e-022
 Identities = 58/103 (56%), Positives = 66/103 (64%), Gaps = 14/103 (13%)
 Frame = -2

Query: 400 STSEGDSVS*TREEKRRMVGSGAPQRGSAAAAASMRRRKPSGSGGASGGGGA-----AGS 236
           STS G S +          G  AP RGSAAA A MRRR+  G GG S GGG+     + +
Sbjct:  11 STSTGSSTA--------RPGLAAP-RGSAAATAGMRRRRLGGGGGVSSGGGSGVGSGSSN 61

Query: 235 MLQFYTDDAPGLKISPNVVLVMSIGFIAFVAVLHVMGKLYFVK 107
           ML+FYTDDAPGLKISP VVL+MS+ FI FV  LHV GKLY  K
Sbjct:  62 MLRFYTDDAPGLKISPTVVLIMSLCFIGFVTALHVFGKLYLHK 104

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,340,215,564
Number of Sequences: 33410
Number of Extensions: 21340215564
Number of Successful Extensions: 670064450
Number of sequences better than 0.0: 0