BLASTX 7.6.2
Query= UN43893 /QuerySize=629
(628 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G04390.1 | Symbols: | 40S ribosomal protein S... 226 1e-059
TAIR9_protein||AT2G05220.1 | Symbols: | 40S ribosomal protein S... 226 1e-059
TAIR9_protein||AT2G05220.2 | Symbols: | 40S ribosomal protein S... 226 1e-059
TAIR9_protein||AT5G04800.1 | Symbols: | 40S ribosomal protein S... 226 1e-059
TAIR9_protein||AT5G04800.2 | Symbols: | 40S ribosomal protein S... 226 1e-059
TAIR9_protein||AT5G04800.3 | Symbols: | 40S ribosomal protein S... 226 1e-059
TAIR9_protein||AT5G04800.4 | Symbols: | 40S ribosomal protein S... 226 1e-059
TAIR9_protein||AT3G10610.1 | Symbols: | 40S ribosomal protein S... 225 3e-059
>TAIR9_protein||AT2G04390.1 | Symbols: | 40S ribosomal protein S17 (RPS17A) |
chr2:1527911-1528336 FORWARD
Length = 142
Score = 226 bits (575), Expect = 1e-059
Identities = 122/142 (85%), Positives = 125/142 (88%), Gaps = 6/142 (4%)
Frame = -3
Query: 596 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 417
MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
Query: 416 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDVIKVDKETLEMLASLGMSGAHGFSEV 237
IQKGPVRGISLKLQEEERERRMDFVPDESAIKTD IKVDKETLEMLASLGMS G S V
Sbjct: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTLGISAV 120
Query: 236 EAQAA----PSF--SRPPRRF* 189
+ Q A P+F R PRR+*
Sbjct: 121 DPQQAMAPIPAFGGGRAPRRY* 142
>TAIR9_protein||AT2G05220.1 | Symbols: | 40S ribosomal protein S17 (RPS17B) |
chr2:1894757-1895179 REVERSE
Length = 141
Score = 226 bits (574), Expect = 1e-059
Identities = 121/141 (85%), Positives = 123/141 (87%), Gaps = 5/141 (3%)
Frame = -3
Query: 596 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 417
MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
Query: 416 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDVIKVDKETLEMLASLGMSGAHGFSEV 237
IQKGPVRGISLKLQEEERERRMDFVPDESAIKTD IKVDKETLEMLASLGMS G S V
Sbjct: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTSGISAV 120
Query: 236 EAQAAPS-----FSRPPRRF* 189
E Q A + R PRR+*
Sbjct: 121 EPQQAMAPIAAFGGRAPRRY* 141
>TAIR9_protein||AT2G05220.2 | Symbols: | 40S ribosomal protein S17 (RPS17B) |
chr2:1894757-1895179 REVERSE
Length = 141
Score = 226 bits (574), Expect = 1e-059
Identities = 121/141 (85%), Positives = 123/141 (87%), Gaps = 5/141 (3%)
Frame = -3
Query: 596 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 417
MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
Query: 416 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDVIKVDKETLEMLASLGMSGAHGFSEV 237
IQKGPVRGISLKLQEEERERRMDFVPDESAIKTD IKVDKETLEMLASLGMS G S V
Sbjct: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTSGISAV 120
Query: 236 EAQAAPS-----FSRPPRRF* 189
E Q A + R PRR+*
Sbjct: 121 EPQQAMAPIAAFGGRAPRRY* 141
>TAIR9_protein||AT5G04800.1 | Symbols: | 40S ribosomal protein S17 (RPS17D) |
chr5:1389217-1389642 FORWARD
Length = 142
Score = 226 bits (574), Expect = 1e-059
Identities = 122/142 (85%), Positives = 123/142 (86%), Gaps = 6/142 (4%)
Frame = -3
Query: 596 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 417
MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
Query: 416 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDVIKVDKETLEMLASLGMSGAHGFSEV 237
IQKGPVRGISLKLQEEERERRMDFVPDESAIKTD IKVDKETLEMLASLGMS G S V
Sbjct: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAV 120
Query: 236 EAQ------AAPSFSRPPRRF* 189
E Q AA R PRR+*
Sbjct: 121 EPQQAMAPIAAFGGGRAPRRY* 142
>TAIR9_protein||AT5G04800.2 | Symbols: | 40S ribosomal protein S17 (RPS17D) |
chr5:1389217-1389642 FORWARD
Length = 142
Score = 226 bits (574), Expect = 1e-059
Identities = 122/142 (85%), Positives = 123/142 (86%), Gaps = 6/142 (4%)
Frame = -3
Query: 596 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 417
MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
Query: 416 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDVIKVDKETLEMLASLGMSGAHGFSEV 237
IQKGPVRGISLKLQEEERERRMDFVPDESAIKTD IKVDKETLEMLASLGMS G S V
Sbjct: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAV 120
Query: 236 EAQ------AAPSFSRPPRRF* 189
E Q AA R PRR+*
Sbjct: 121 EPQQAMAPIAAFGGGRAPRRY* 142
>TAIR9_protein||AT5G04800.3 | Symbols: | 40S ribosomal protein S17 (RPS17D) |
chr5:1389217-1389642 FORWARD
Length = 142
Score = 226 bits (574), Expect = 1e-059
Identities = 122/142 (85%), Positives = 123/142 (86%), Gaps = 6/142 (4%)
Frame = -3
Query: 596 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 417
MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
Query: 416 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDVIKVDKETLEMLASLGMSGAHGFSEV 237
IQKGPVRGISLKLQEEERERRMDFVPDESAIKTD IKVDKETLEMLASLGMS G S V
Sbjct: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAV 120
Query: 236 EAQ------AAPSFSRPPRRF* 189
E Q AA R PRR+*
Sbjct: 121 EPQQAMAPIAAFGGGRAPRRY* 142
>TAIR9_protein||AT5G04800.4 | Symbols: | 40S ribosomal protein S17 (RPS17D) |
chr5:1389217-1389642 FORWARD
Length = 142
Score = 226 bits (574), Expect = 1e-059
Identities = 122/142 (85%), Positives = 123/142 (86%), Gaps = 6/142 (4%)
Frame = -3
Query: 596 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 417
MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
Query: 416 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDVIKVDKETLEMLASLGMSGAHGFSEV 237
IQKGPVRGISLKLQEEERERRMDFVPDESAIKTD IKVDKETLEMLASLGMS G S V
Sbjct: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAV 120
Query: 236 EAQ------AAPSFSRPPRRF* 189
E Q AA R PRR+*
Sbjct: 121 EPQQAMAPIAAFGGGRAPRRY* 142
>TAIR9_protein||AT3G10610.1 | Symbols: | 40S ribosomal protein S17 (RPS17C) |
chr3:3319459-3319881 FORWARD
Length = 141
Score = 225 bits (571), Expect = 3e-059
Identities = 119/138 (86%), Positives = 123/138 (89%), Gaps = 3/138 (2%)
Frame = -3
Query: 596 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 417
MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKR 60
Query: 416 IQKGPVRGISLKLQEEERERRMDFVPDESAIKTDVIKVDKETLEMLASLGMSGAHGFSEV 237
IQKGPVRGISLKLQEEERERRMDFVPDESAIK D +KVDKETLEMLASLGMS G S+V
Sbjct: 61 IQKGPVRGISLKLQEEERERRMDFVPDESAIKIDDVKVDKETLEMLASLGMSDIAGISQV 120
Query: 236 EAQAAPS---FSRPPRRF 192
E Q A + F RP R+
Sbjct: 121 ETQQAMAPAVFGRPAGRY 138
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,340,215,564
Number of Sequences: 33410
Number of Extensions: 21340215564
Number of Successful Extensions: 670064450
Number of sequences better than 0.0: 0
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