BLASTX 7.6.2
Query= UN44004 /QuerySize=933
(932 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|119720774|gb|ABL97957.1| poly(A)-binding protein II-like [Bra... 277 2e-072
gi|15238390|ref|NP_201329.1| RNA recognition motif-containing pr... 277 3e-072
gi|297797553|ref|XP_002866661.1| polyadenylate-binding protein f... 277 3e-072
gi|255637596|gb|ACU19123.1| unknown [Glycine max] 255 9e-066
gi|255647938|gb|ACU24426.1| unknown [Glycine max] 254 2e-065
gi|224081120|ref|XP_002306300.1| predicted protein [Populus tric... 252 8e-065
gi|255581746|ref|XP_002531675.1| poly-A binding protein, putativ... 250 4e-064
gi|224093736|ref|XP_002309968.1| predicted protein [Populus tric... 249 7e-064
gi|217072312|gb|ACJ84516.1| unknown [Medicago truncatula] 247 3e-063
gi|297811137|ref|XP_002873452.1| polyadenylate-binding protein f... 244 2e-062
gi|15238140|ref|NP_196597.1| RNA recognition motif-containing pr... 243 4e-062
gi|30683122|ref|NP_850803.1| RNA recognition motif-containing pr... 243 4e-062
gi|255633822|gb|ACU17272.1| unknown [Glycine max] 223 3e-056
gi|302786636|ref|XP_002975089.1| hypothetical protein SELMODRAFT... 220 4e-055
gi|255647673|gb|ACU24298.1| unknown [Glycine max] 205 1e-050
gi|255635956|gb|ACU18324.1| unknown [Glycine max] 204 2e-050
gi|255569758|ref|XP_002525843.1| poly-A binding protein, putativ... 203 4e-050
gi|297792425|ref|XP_002864097.1| hypothetical protein ARALYDRAFT... 201 2e-049
gi|345121426|gb|AEN74948.1| poly(A)-binding protein 1 [Citrus si... 199 6e-049
gi|8843848|dbj|BAA97374.1| unnamed protein product [Arabidopsis ... 198 1e-048
>gi|119720774|gb|ABL97957.1| poly(A)-binding protein II-like [Brassica rapa]
Length = 220
Score = 277 bits (708), Expect = 2e-072
Identities = 141/163 (86%), Positives = 148/163 (90%), Gaps = 7/163 (4%)
Frame = -3
Query: 900 MEEEEHEVYGEEIPDVGEMDG-------DMDMTAADDDAAKELDEMKKRLKEIEDEAATL 742
MEEEEHEVYG EIPDVGEMDG DM+M AAD+DAAKELDEMKKRLKE+EDEAA L
Sbjct: 1 MEEEEHEVYGGEIPDVGEMDGDMEAPNPDMEMAAADEDAAKELDEMKKRLKEMEDEAAAL 60
Query: 741 REMQAKVEKDMGPQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHR 562
REMQAKVEK+MG QD T+AA+QAGKEEVDARSVFVGNVDYACTPEEVQQ FQSCGTVHR
Sbjct: 61 REMQAKVEKEMGAQDPATLAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQSCGTVHR 120
Query: 561 VTILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
VTILTDKFGQPKGFAYVEFVE EAIQEALQLNESELHGRQ+KV
Sbjct: 121 VTILTDKFGQPKGFAYVEFVEVEAIQEALQLNESELHGRQLKV 163
>gi|15238390|ref|NP_201329.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 220
Score = 277 bits (706), Expect = 3e-072
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 7/163 (4%)
Frame = -3
Query: 900 MEEEEHEVYGEEIPDVGEMDGDM-------DMTAADDDAAKELDEMKKRLKEIEDEAATL 742
MEEEEHEVYG EIPDVGEMDGDM DM AADDDA KELDEMKKRLKE+EDEAA L
Sbjct: 1 MEEEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAAL 60
Query: 741 REMQAKVEKDMGPQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHR 562
REMQAKVEK+MG QD ++AA+QAGKEEVDARSVFVGNVDYACTPEEVQQ FQ+CGTVHR
Sbjct: 61 REMQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHR 120
Query: 561 VTILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
VTILTDKFGQPKGFAYVEFVE EA+QEALQLNESELHGRQ+KV
Sbjct: 121 VTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKV 163
>gi|297797553|ref|XP_002866661.1| polyadenylate-binding protein family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 220
Score = 277 bits (706), Expect = 3e-072
Identities = 139/163 (85%), Positives = 147/163 (90%), Gaps = 7/163 (4%)
Frame = -3
Query: 900 MEEEEHEVYGEEIPDVGEMDGDM-------DMTAADDDAAKELDEMKKRLKEIEDEAATL 742
MEEEEHEVYG EIPDVGEMDGDM DM AADDDA KELDEMKKRLKE+EDEAA L
Sbjct: 1 MEEEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAAL 60
Query: 741 REMQAKVEKDMGPQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHR 562
REMQAKVEK+MG QD ++AA+QAGKEEVDARSVFVGNVDYACTPEEVQQ FQ+CGTVHR
Sbjct: 61 REMQAKVEKEMGAQDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVHR 120
Query: 561 VTILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
VTILTDKFGQPKGFAYVEFVE EA+QEALQLNESELHGRQ+KV
Sbjct: 121 VTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKV 163
>gi|255637596|gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 255 bits (650), Expect = 9e-066
Identities = 130/158 (82%), Positives = 143/158 (90%), Gaps = 2/158 (1%)
Frame = -3
Query: 900 MEEEEHEVYGEEIPDVGEMDGDMDMTAADDDAA-KELDEMKKRLKEIEDEAATLREMQAK 724
MEEEEHEVYG EIPD GEM+GD+DM+AADDDAA KELDEMK+RLKE+E+EAA LREMQAK
Sbjct: 1 MEEEEHEVYGGEIPDEGEMEGDIDMSAADDDAAVKELDEMKRRLKEMEEEAAALREMQAK 60
Query: 723 VEKDMGP-QDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHRVTILT 547
V+K++G QD AA QA KEE D+RSVFVGNVDYACTPEEVQQ FQSCGTV+RVTILT
Sbjct: 61 VDKEIGSVQDPANSAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILT 120
Query: 546 DKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
DKFGQPKGFAYVEFVEAEA+QEAL LNESELHGRQ+KV
Sbjct: 121 DKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKV 158
>gi|255647938|gb|ACU24426.1| unknown [Glycine max]
Length = 218
Score = 254 bits (648), Expect = 2e-065
Identities = 131/164 (79%), Positives = 143/164 (87%), Gaps = 8/164 (4%)
Frame = -3
Query: 900 MEEEEHEVYGEEIPDVGEMDGDMDMTAADDDAA-------KELDEMKKRLKEIEDEAATL 742
MEEEEHEVYG EIPD GEM+GD+DM+AADD+AA KELDEMK+RLKE+E+EAA L
Sbjct: 1 MEEEEHEVYGGEIPDEGEMEGDIDMSAADDEAAVDDDAAVKELDEMKRRLKEMEEEAAAL 60
Query: 741 REMQAKVEKDMGP-QDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVH 565
REMQAKVEK++G QD AA QA KEE DARSVFVGNVDYACTPEEVQQ FQSCGTV+
Sbjct: 61 REMQAKVEKEIGSVQDPANAAASQANKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVN 120
Query: 564 RVTILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
RVTILTDKFGQPKGFAYVEFVEAEA+QEAL LNESELHGRQ+KV
Sbjct: 121 RVTILTDKFGQPKGFAYVEFVEAEAVQEALLLNESELHGRQLKV 164
>gi|224081120|ref|XP_002306300.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 252 bits (642), Expect = 8e-065
Identities = 130/161 (80%), Positives = 143/161 (88%), Gaps = 5/161 (3%)
Frame = -3
Query: 900 MEEEEHEVYGEEIPDV-GEMD---GDMDMTAADDDAAKELDEMKKRLKEIEDEAATLREM 733
MEEEEHEVYG EIPDV G+MD D+DM+AADDDA KELDEMKKRLKE+E+EAA LREM
Sbjct: 1 MEEEEHEVYGGEIPDVEGDMDPHNADVDMSAADDDAVKELDEMKKRLKEMEEEAAALREM 60
Query: 732 QAKVEKDMGP-QDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHRVT 556
QAKVEK+MG QD T AA+QA +EE D+RSVFVGNVDYACTPEEVQQ FQSCGTV+RVT
Sbjct: 61 QAKVEKEMGAVQDPATAAANQANREEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVT 120
Query: 555 ILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
ILTDKFGQPKGFAYVEF+E EA+QEAL LNESELHGRQ+KV
Sbjct: 121 ILTDKFGQPKGFAYVEFLEVEAVQEALALNESELHGRQLKV 161
>gi|255581746|ref|XP_002531675.1| poly-A binding protein, putative [Ricinus
communis]
Length = 218
Score = 250 bits (636), Expect = 4e-064
Identities = 130/161 (80%), Positives = 143/161 (88%), Gaps = 5/161 (3%)
Frame = -3
Query: 900 MEEEEHEVYGEEIPDV-GEMDG---DMDMTAADDDAAKELDEMKKRLKEIEDEAATLREM 733
MEEEEHEVYG EIPD+ G++D DMDM+AADDDA KELDEMKKRLKE+E+EAA LREM
Sbjct: 1 MEEEEHEVYGGEIPDMEGDIDPHNVDMDMSAADDDAVKELDEMKKRLKEMEEEAAALREM 60
Query: 732 QAKVEKDMGP-QDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHRVT 556
QAKVEK+MG QD + AA+QA KEE D+RSVFVGNVDYACTPEEVQQ FQSCGTV+RVT
Sbjct: 61 QAKVEKEMGAVQDPASAAANQANKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVT 120
Query: 555 ILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
ILTDKFGQPKGFAYVEF+E EAIQEAL LNESELHGRQ+KV
Sbjct: 121 ILTDKFGQPKGFAYVEFLEVEAIQEALLLNESELHGRQLKV 161
>gi|224093736|ref|XP_002309968.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 249 bits (634), Expect = 7e-064
Identities = 129/161 (80%), Positives = 142/161 (88%), Gaps = 5/161 (3%)
Frame = -3
Query: 900 MEEEEHEVYGEEIPDV-GEMD---GDMDMTAADDDAAKELDEMKKRLKEIEDEAATLREM 733
MEEEEHEVYG EIPDV G+MD D+DM+AA+DDA KELDEMKKRLKE+E+EAA LREM
Sbjct: 1 MEEEEHEVYGGEIPDVEGDMDPHNADVDMSAAEDDAVKELDEMKKRLKEMEEEAAALREM 60
Query: 732 QAKVEKDMGP-QDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHRVT 556
QAKVEK+MG D + AA+QA KEE D+RSVFVGNVDYACTPEEVQQ FQSCGTV+RVT
Sbjct: 61 QAKVEKEMGAVPDPASAAANQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVT 120
Query: 555 ILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
ILTDKFGQPKGFAYVEFVE EA+QEAL LNESELHGRQ+KV
Sbjct: 121 ILTDKFGQPKGFAYVEFVEVEAVQEALALNESELHGRQLKV 161
>gi|217072312|gb|ACJ84516.1| unknown [Medicago truncatula]
Length = 216
Score = 247 bits (629), Expect = 3e-063
Identities = 125/159 (78%), Positives = 141/159 (88%), Gaps = 3/159 (1%)
Frame = -3
Query: 900 MEEEEHEVYGEEIPDVGEMDGDMDMTAADDDAA--KELDEMKKRLKEIEDEAATLREMQA 727
M+EEEHEVYG EIPDV EM+GD+DM+AADD+A KELDEM++RLKE+E+EAA LREM A
Sbjct: 1 MDEEEHEVYGGEIPDVAEMEGDVDMSAADDEAGGMKELDEMRRRLKEMEEEAAALREMHA 60
Query: 726 KVEKDMGP-QDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHRVTIL 550
KVEK++G QD +VAA Q KEE DARSVFVGNVDYACTPEEVQQ FQSCGTV+RVTIL
Sbjct: 61 KVEKEIGSVQDPASVAASQENKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTIL 120
Query: 549 TDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
TDKFGQPKGFAYVEFVE EA+QEAL L+ESELHGRQ+KV
Sbjct: 121 TDKFGQPKGFAYVEFVETEAVQEALLLSESELHGRQLKV 159
>gi|297811137|ref|XP_002873452.1| polyadenylate-binding protein family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 202
Score = 244 bits (621), Expect = 2e-062
Identities = 126/160 (78%), Positives = 139/160 (86%), Gaps = 4/160 (2%)
Frame = -3
Query: 900 MEEEEHEVYGEEIPDVGEM---DGDMDMTAADDDAAKELDEMKKRLKEIEDEAATLREMQ 730
MEEEEHEVYG EIP+V E D D+DM+A DDDA EL EMKKRLKE+E+EAA LREMQ
Sbjct: 1 MEEEEHEVYGGEIPEVEETDVPDPDIDMSAGDDDAVTELAEMKKRLKEMEEEAAALREMQ 60
Query: 729 AKVEKDMG-PQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHRVTI 553
AKVEK+MG QD T+AA+Q GKEEVDARSV+VGNVDYACTPEEVQ FQ+CGTV+RVTI
Sbjct: 61 AKVEKEMGATQDPATMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 552 LTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
L DKFGQPKGFAYVEFVE EA+QEALQLNESELHGRQ+KV
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKV 160
>gi|15238140|ref|NP_196597.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 217
Score = 243 bits (619), Expect = 4e-062
Identities = 124/160 (77%), Positives = 141/160 (88%), Gaps = 4/160 (2%)
Frame = -3
Query: 900 MEEEEHEVYGEEIPDVGEM---DGDMDMTAADDDAAKELDEMKKRLKEIEDEAATLREMQ 730
MEEEEHEVYG EIP+VG+ D D+DM+AAD+DA EL EMK+RLKE+E+EAA LREMQ
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60
Query: 729 AKVEKDMG-PQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHRVTI 553
AKVEK+MG QD ++AA+Q GKEEVDARSV+VGNVDYACTPEEVQ FQ+CGTV+RVTI
Sbjct: 61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 552 LTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
L DKFGQPKGFAYVEFVE EA+QEALQLNESELHGRQ+KV
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKV 160
>gi|30683122|ref|NP_850803.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 202
Score = 243 bits (619), Expect = 4e-062
Identities = 124/160 (77%), Positives = 141/160 (88%), Gaps = 4/160 (2%)
Frame = -3
Query: 900 MEEEEHEVYGEEIPDVGEM---DGDMDMTAADDDAAKELDEMKKRLKEIEDEAATLREMQ 730
MEEEEHEVYG EIP+VG+ D D+DM+AAD+DA EL EMK+RLKE+E+EAA LREMQ
Sbjct: 1 MEEEEHEVYGGEIPEVGDTDVPDPDIDMSAADEDAVTELAEMKRRLKEMEEEAAALREMQ 60
Query: 729 AKVEKDMG-PQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHRVTI 553
AKVEK+MG QD ++AA+Q GKEEVDARSV+VGNVDYACTPEEVQ FQ+CGTV+RVTI
Sbjct: 61 AKVEKEMGATQDPASMAANQEGKEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTI 120
Query: 552 LTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
L DKFGQPKGFAYVEFVE EA+QEALQLNESELHGRQ+KV
Sbjct: 121 LMDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKV 160
>gi|255633822|gb|ACU17272.1| unknown [Glycine max]
Length = 183
Score = 223 bits (568), Expect = 3e-056
Identities = 117/162 (72%), Positives = 134/162 (82%), Gaps = 7/162 (4%)
Frame = -3
Query: 900 MEEEEHEVYGEEIPDVGEMDGDMDMTAADDDAA-----KELDEMKKRLKEIEDEAATLRE 736
ME+EEHEVYG +IPD E+D D D D+ A KEL++MKKRLKEIE+EA+ LRE
Sbjct: 1 MEQEEHEVYGADIPD-EEIDMDADAEQQDEQLAPNHTNKELEDMKKRLKEIEEEASALRE 59
Query: 735 MQAKVEKDMGP-QDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHRV 559
MQAKVEK+MG QD+ +A QA KEEVDARS++VGNVDYACTPEEVQQ FQSCGTV+RV
Sbjct: 60 MQAKVEKEMGAVQDSSGTSATQAEKEEVDARSIYVGNVDYACTPEEVQQHFQSCGTVNRV 119
Query: 558 TILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
TILTDKFGQPKGFAYVEFVE +A+Q AL LNESELHGRQ+KV
Sbjct: 120 TILTDKFGQPKGFAYVEFVEIDAVQNALLLNESELHGRQLKV 161
>gi|302786636|ref|XP_002975089.1| hypothetical protein SELMODRAFT_102545
[Selaginella moellendorffii]
Length = 224
Score = 220 bits (558), Expect = 4e-055
Identities = 113/160 (70%), Positives = 128/160 (80%), Gaps = 3/160 (1%)
Frame = -3
Query: 894 EEEHEVYGEEIPD--VGEMDGDM-DMTAADDDAAKELDEMKKRLKEIEDEAATLREMQAK 724
E+EHEVYG EIP+ G+++GD D DD + EL+EMKKRLKE+EDEAA LR+MQAK
Sbjct: 8 EDEHEVYGGEIPEEVEGDLEGDQGDDAGGDDPTSTELEEMKKRLKEMEDEAAALRDMQAK 67
Query: 723 VEKDMGPQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHRVTILTD 544
VEK+MG AA QA KEE DARSV+VGNVDY+CTPEEVQQ FQSCGTV+RVTILTD
Sbjct: 68 VEKEMGAGQDPAAAAQQASKEEADARSVYVGNVDYSCTPEEVQQHFQSCGTVNRVTILTD 127
Query: 543 KFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKVHKS 424
KFGQPKGFAYVEF+E EA+Q AL LNESELHGR IK S
Sbjct: 128 KFGQPKGFAYVEFLEVEAVQNALILNESELHGRPIKARIS 167
>gi|255647673|gb|ACU24298.1| unknown [Glycine max]
Length = 197
Score = 205 bits (520), Expect = 1e-050
Identities = 104/136 (76%), Positives = 119/136 (87%), Gaps = 3/136 (2%)
Frame = -3
Query: 837 DMDMTAADDDAAKELDEMKKRLKEIEDEAATLREMQAKVEKDMG-PQDAGTVAADQAGKE 661
D+DM AA D ++ELD+MKKRLKE+EDEAA LREMQAKVEK+MG QD +A QA KE
Sbjct: 5 DVDMHAA--DTSEELDDMKKRLKEMEDEAAALREMQAKVEKEMGSAQDPANASASQANKE 62
Query: 660 EVDARSVFVGNVDYACTPEEVQQPFQSCGTVHRVTILTDKFGQPKGFAYVEFVEAEAIQE 481
E+D+RSVFVGNVDY+CTPEEVQQ FQSCGTV+RVTI TDKFGQPKG+AYVEF+E EA+QE
Sbjct: 63 EIDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEAVQE 122
Query: 480 ALQLNESELHGRQIKV 433
AL LNESELHGRQ+KV
Sbjct: 123 ALLLNESELHGRQLKV 138
>gi|255635956|gb|ACU18324.1| unknown [Glycine max]
Length = 197
Score = 204 bits (518), Expect = 2e-050
Identities = 103/136 (75%), Positives = 119/136 (87%), Gaps = 3/136 (2%)
Frame = -3
Query: 837 DMDMTAADDDAAKELDEMKKRLKEIEDEAATLREMQAKVEKDMGP-QDAGTVAADQAGKE 661
D+DM AAD + +ELD+MKKRLKE+EDEAA LREMQAKVEK+MG QD +A QA KE
Sbjct: 5 DVDMHAADTN--EELDDMKKRLKEMEDEAAALREMQAKVEKEMGSVQDPANASASQANKE 62
Query: 660 EVDARSVFVGNVDYACTPEEVQQPFQSCGTVHRVTILTDKFGQPKGFAYVEFVEAEAIQE 481
E+D+RSVFVGNVDY+CTPEEVQQ FQSCGTV+R+TI TDKFGQPKG+AYVEF+E EA+QE
Sbjct: 63 EIDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKFGQPKGYAYVEFLEVEAVQE 122
Query: 480 ALQLNESELHGRQIKV 433
AL LNESELHGRQ+KV
Sbjct: 123 ALLLNESELHGRQLKV 138
>gi|255569758|ref|XP_002525843.1| poly-A binding protein, putative [Ricinus
communis]
Length = 198
Score = 203 bits (515), Expect = 4e-050
Identities = 101/141 (71%), Positives = 119/141 (84%), Gaps = 3/141 (2%)
Frame = -3
Query: 846 MDGD---MDMTAADDDAAKELDEMKKRLKEIEDEAATLREMQAKVEKDMGPQDAGTVAAD 676
M+G+ MD T +++ ELD+MKKRLKE+EDEAA LREMQAKVEK+MG T AA
Sbjct: 1 MEGEDMVMDGTEINEEEVPELDDMKKRLKEMEDEAAALREMQAKVEKEMGSSQDPTAAAS 60
Query: 675 QAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHRVTILTDKFGQPKGFAYVEFVEA 496
QA +EEVD+RSVFVGNVDY+CTPEEVQQ FQSCGTV+R+TI TDK+GQPKG+AYVEF+E
Sbjct: 61 QANREEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKYGQPKGYAYVEFLEP 120
Query: 495 EAIQEALQLNESELHGRQIKV 433
EA+QEAL LNESELHGRQ+KV
Sbjct: 121 EAVQEALLLNESELHGRQLKV 141
>gi|297792425|ref|XP_002864097.1| hypothetical protein ARALYDRAFT_918145
[Arabidopsis lyrata subsp. lyrata]
Length = 228
Score = 201 bits (510), Expect = 2e-049
Identities = 105/165 (63%), Positives = 125/165 (75%), Gaps = 5/165 (3%)
Frame = -3
Query: 927 TEREREREAMEEEEHEVYGEEIPDVGEMDGDMDMTAADDDAAKELDEMKKRLKEIEDEAA 748
+E E E M+ EE+E +G E G GD ++ ++K+L++MKKR+KEIE+EA
Sbjct: 17 SEEEEEEGEMDTEEYEEHGGE---EGAAAGDEELEPG--SSSKDLEDMKKRIKEIEEEAG 71
Query: 747 TLREMQAKVEKDMGPQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTV 568
LREMQAK EKDMG + A KEEVD+RS++VGNVDYACTPEEVQQ FQSCGTV
Sbjct: 72 ALREMQAKAEKDMGAGQDPSGGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTV 131
Query: 567 HRVTILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
+RVTILTDKFGQPKGFAYVEFVE EA+Q +L LNESELHGRQIKV
Sbjct: 132 NRVTILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKV 176
>gi|345121426|gb|AEN74948.1| poly(A)-binding protein 1 [Citrus sinensis]
Length = 234
Score = 199 bits (505), Expect = 6e-049
Identities = 103/157 (65%), Positives = 125/157 (79%), Gaps = 4/157 (2%)
Frame = -3
Query: 900 MEEEEHEVYGEEIPDVGEMDGDMDMTAADDDAAKELDEMKKRLKEIEDEAATLREMQAKV 721
++E EHE + E D D + + +K+L++MKKRLKEIE+EA LREMQAKV
Sbjct: 26 VDEHEHE---HDQDHEHEHDADNENEEDPNANSKDLEDMKKRLKEIEEEAGALREMQAKV 82
Query: 720 EKDMGP-QDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHRVTILTD 544
EK+MG QD+ + +A QA KEEVD+RS++VGNVDYACTPEEVQQ FQSCGTV+RVTILTD
Sbjct: 83 EKEMGAVQDSSSTSATQAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRVTILTD 142
Query: 543 KFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
KFGQPKGFAYVEFVE +A+Q AL LNE+ELHGRQ+KV
Sbjct: 143 KFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKV 179
>gi|8843848|dbj|BAA97374.1| unnamed protein product [Arabidopsis thaliana]
Length = 267
Score = 198 bits (503), Expect = 1e-048
Identities = 103/162 (63%), Positives = 123/162 (75%), Gaps = 5/162 (3%)
Frame = -3
Query: 918 EREREAMEEEEHEVYGEEIPDVGEMDGDMDMTAADDDAAKELDEMKKRLKEIEDEAATLR 739
E E M+ EE+E +G E G GD ++ ++++L++MKKR+KEIE+EA LR
Sbjct: 18 EEEEGEMDTEEYEEHGGE---EGAAAGDEELEPG--SSSRDLEDMKKRIKEIEEEAGALR 72
Query: 738 EMQAKVEKDMGPQDAGTVAADQAGKEEVDARSVFVGNVDYACTPEEVQQPFQSCGTVHRV 559
EMQAK EKDMG + A KEEVD+RS++VGNVDYACTPEEVQQ FQSCGTV+RV
Sbjct: 73 EMQAKAEKDMGASQDPSGGVSAAEKEEVDSRSIYVGNVDYACTPEEVQQHFQSCGTVNRV 132
Query: 558 TILTDKFGQPKGFAYVEFVEAEAIQEALQLNESELHGRQIKV 433
TILTDKFGQPKGFAYVEFVE EA+Q +L LNESELHGRQIKV
Sbjct: 133 TILTDKFGQPKGFAYVEFVEVEAVQNSLILNESELHGRQIKV 174
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,837,552,758,913
Number of Sequences: 15229318
Number of Extensions: 4837552758913
Number of Successful Extensions: 1137592257
Number of sequences better than 0.0: 0
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