BLASTX 7.6.2
Query= UN44056 /QuerySize=757
(756 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G23340.1 | Symbols: | INVOLVED IN: biological... 270 8e-073
TAIR9_protein||AT5G27920.1 | Symbols: | F-box family protein | ... 49 3e-006
>TAIR9_protein||AT5G23340.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Leucine-rich repeat, cysteine-containing subtype
(InterPro:IPR006553); BEST Arabidopsis thaliana protein match is: F-box
family protein (FBL4) (TAIR:AT4G15475.1); Has 9095 Blast hits to 3545
proteins in 210 species: Archae - 0; Bacteria - 454; Metazoa - 4575;
Fungi - 774; Plants - 2118; Viruses - 15; Other Eukaryotes - 1159
(source: NCBI BLink). | chr5:7856314-7857983 FORWARD
Length = 406
Score = 270 bits (689), Expect = 8e-073
Identities = 126/143 (88%), Positives = 138/143 (96%)
Frame = -1
Query: 756 GCRDISDESIVLLADSCKDSLKNLRMDWCLNVSDSSLTCVLRKCKNLEALDIGCCEEVTD 577
GCRDISDESI+LLADSCKDSLKNLRMDWCLN+SDSSL+C+L++CKNLEALDIGCCEEVTD
Sbjct: 264 GCRDISDESIMLLADSCKDSLKNLRMDWCLNISDSSLSCILKQCKNLEALDIGCCEEVTD 323
Query: 576 SAFRELGSEDVLGLKVLKVSNCPKITVAGIGKLLEKCSSLEYLDVRSLPHVTEVRCREAG 397
+AFR+LGS+DVLGLKVLKVSNC KITV GIGKLL+KCSSLEY+DVRSLPHVTEVRC EAG
Sbjct: 324 TAFRDLGSDDVLGLKVLKVSNCTKITVTGIGKLLDKCSSLEYIDVRSLPHVTEVRCSEAG 383
Query: 396 LEFPSCCKVNYSGSLTEPDVLL* 328
LEFP CCKVN+SGSLTEPDVLL*
Sbjct: 384 LEFPKCCKVNFSGSLTEPDVLL* 406
Score = 74 bits (179), Expect = 1e-013
Identities = 37/119 (31%), Positives = 65/119 (54%)
Frame = -1
Query: 753 CRDISDESIVLLADSCKDSLKNLRMDWCLNVSDSSLTCVLRKCKNLEALDIGCCEEVTDS 574
C ++ D + +A +C SLK L++ C V + S++ + + CKNLE L IG C +++D
Sbjct: 212 CSNVGDAGVSSVAKACASSLKTLKLLDCYKVGNESISSLAQFCKNLETLIIGGCRDISDE 271
Query: 573 AFRELGSEDVLGLKVLKVSNCPKITVAGIGKLLEKCSSLEYLDVRSLPHVTEVRCREAG 397
+ L LK L++ C I+ + + +L++C +LE LD+ VT+ R+ G
Sbjct: 272 SIMLLADSCKDSLKNLRMDWCLNISDSSLSCILKQCKNLEALDIGCCEEVTDTAFRDLG 330
Score = 60 bits (143), Expect = 2e-009
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Frame = -1
Query: 753 CRDISDESIVLLADSCKDSLKNLRMDWCLNVSDSSLTCVLRKCKNLEALDIGCCEEVTDS 574
CR +SD+ + +A+ C D L+ L + C ++D SL + +C++LEAL + C +TDS
Sbjct: 134 CRKLSDKGLSAVAEGCHD-LRALHLAGCRFITDESLKSLSERCRDLEALGLQGCTNITDS 192
Query: 573 AFRELGSEDVLGLKVLKVSNCPKITVAGIGKLLEKCSS 460
+L + +K L ++ C + AG+ + + C+S
Sbjct: 193 GLADL-VKGCRKIKSLDINKCSNVGDAGVSSVAKACAS 229
>TAIR9_protein||AT5G27920.1 | Symbols: | F-box family protein |
chr5:9942063-9944507 REVERSE
Length = 643
Score = 49 bits (115), Expect = 3e-006
Identities = 36/123 (29%), Positives = 57/123 (46%), Gaps = 11/123 (8%)
Frame = -1
Query: 696 LKNLRMDWC--LNVSDSSLTCVLRKCKNLEALDIGCCEEVTDSAFRELGSEDVLGLKVLK 523
LK+L+ W +VSDSSL + C++L + + C +VTD L + + L LK L
Sbjct: 299 LKHLKTIWIDGAHVSDSSLVSLSSSCRSLMEIGLSRCVDVTDIGMISL-ARNCLNLKTLN 357
Query: 522 VSNCPKITVAGIGKLLEKCSSLEYLDVRSLPHVTEVRCREAG--------LEFPSCCKVN 367
++ C +T I + + C +L L + S +TE + G L+ C VN
Sbjct: 358 LACCGFVTDVAISAVAQSCRNLGTLKLESCHLITEKGLQSLGCYSMLVQELDLTDCYGVN 417
Query: 366 YSG 358
G
Sbjct: 418 DRG 420
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,384,072,444
Number of Sequences: 33410
Number of Extensions: 21384072444
Number of Successful Extensions: 670071605
Number of sequences better than 0.0: 0
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