Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN44093


BLASTX 7.6.2

Query= UN44093 /QuerySize=643
        (642 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|P49107|PSAN_ARATH Photosystem I reaction center subunit N, ch...    296   9e-080
sp|P31093|PSAN_HORVU Photosystem I reaction center subunit N, ch...    186   2e-046
sp|O65107|PSAN_MAIZE Photosystem I reaction center subunit N, ch...    169   1e-041
sp|Q9SBN5|PSAN_VOLCA Photosystem I reaction center subunit N, ch...    113   1e-024

>sp|P49107|PSAN_ARATH Photosystem I reaction center subunit N, chloroplastic
        OS=Arabidopsis thaliana GN=PSAN PE=1 SV=2

          Length = 171

 Score =  296 bits (757), Expect = 9e-080
 Identities = 153/173 (88%), Positives = 161/173 (93%), Gaps = 6/173 (3%)
 Frame = -2

Query: 629 MAAMNSTVLTCSYAISGGSSAELNQKVGLVNSSVGFGQKKQ-TLPVIKAAQRRVGGDDV- 456
           MAAMNS+VLTCSYAI+G  S ELNQKVGLVNSSVGFGQKKQ  +PVIKA  +RV GDDV 
Sbjct:   1 MAAMNSSVLTCSYAIAGSGSVELNQKVGLVNSSVGFGQKKQMIMPVIKA--QRVVGDDVD 58

Query: 455 --NGRRSAMVFLAATLFSSAAVSASANAGVIDEYLEKSKANKELNDKKRLATSGANFARA 282
             NGRRSAMVFLAATLFS+AAVSASANAGVIDEYLE+SK NKELNDKKRLATSGANFARA
Sbjct:  59 GSNGRRSAMVFLAATLFSTAAVSASANAGVIDEYLERSKTNKELNDKKRLATSGANFARA 118

Query: 281 FTVQFGSCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKFKCGSNVFWKW 123
           FTVQFGSCKFPENFTGCQDLAKQKKVPFISED+ALECEGKDK+KCGSNVFWKW
Sbjct: 119 FTVQFGSCKFPENFTGCQDLAKQKKVPFISEDIALECEGKDKYKCGSNVFWKW 171

>sp|P31093|PSAN_HORVU Photosystem I reaction center subunit N, chloroplastic
        OS=Hordeum vulgare GN=PSAN PE=2 SV=1

          Length = 145

 Score =  186 bits (470), Expect = 2e-046
 Identities = 90/122 (73%), Positives = 101/122 (82%)
 Frame = -2

Query: 488 AAQRRVGGDDVNGRRSAMVFLAATLFSSAAVSASANAGVIDEYLEKSKANKELNDKKRLA 309
           AA +RV       RRSA++ LAA   ++AA + SA A V DEYLEKSK NKELNDKKR A
Sbjct:  24 AAAKRVQVAPAKDRRSALLGLAAVFAATAASAGSARASVFDEYLEKSKLNKELNDKKRAA 83

Query: 308 TSGANFARAFTVQFGSCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKFKCGSNVFW 129
           TSGANFARA+TVQFGSCKFP NFTGCQDLAKQKKVPFI++DL +ECEGK+KFKCGSNVFW
Sbjct:  84 TSGANFARAYTVQFGSCKFPYNFTGCQDLAKQKKVPFITDDLEIECEGKEKFKCGSNVFW 143

Query: 128 KW 123
           KW
Sbjct: 144 KW 145

>sp|O65107|PSAN_MAIZE Photosystem I reaction center subunit N, chloroplastic
        (Fragment) OS=Zea mays GN=PSAN PE=3 SV=1

          Length = 112

 Score =  169 bits (428), Expect = 1e-041
 Identities = 77/91 (84%), Positives = 85/91 (93%)
 Frame = -2

Query: 395 SASANAGVIDEYLEKSKANKELNDKKRLATSGANFARAFTVQFGSCKFPENFTGCQDLAK 216
           + SA A + DEYLEKSKANKELNDKKRLATSGANFARA+TV+FGSC+FP NFTGCQDLAK
Sbjct:  22 TGSAKATIFDEYLEKSKANKELNDKKRLATSGANFARAYTVEFGSCQFPYNFTGCQDLAK 81

Query: 215 QKKVPFISEDLALECEGKDKFKCGSNVFWKW 123
           QKKVPFIS+DL +ECEGK+KFKCGSNVFWKW
Sbjct:  82 QKKVPFISDDLEIECEGKEKFKCGSNVFWKW 112

>sp|Q9SBN5|PSAN_VOLCA Photosystem I reaction center subunit N, chloroplastic
        OS=Volvox carteri GN=PSAN PE=2 SV=1

          Length = 139

 Score =  113 bits (282), Expect = 1e-024
 Identities = 55/92 (59%), Positives = 71/92 (77%)
 Frame = -2

Query: 416 LFSSAAVSASANAGVIDEYLEKSKANKELNDKKRLATSGANFARAFTVQFGSCKFPENFT 237
           L  +AA++ +ANAGV+++ L KS ANK LN+KKRLATS AN AR+ TV  G+C+FPENF 
Sbjct:  41 LLGAAALAPAANAGVVEDLLAKSAANKALNNKKRLATSYANLARSRTVYDGTCQFPENFF 100

Query: 236 GCQDLAKQKKVPFISEDLALECEGKDKFKCGS 141
           GC++LA  K V +I+EDL +ECEGKD   CGS
Sbjct: 101 GCEELAFNKGVKYIAEDLKIECEGKDAKSCGS 132

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,919,208,508
Number of Sequences: 518415
Number of Extensions: 167919208508
Number of Successful Extensions: 1034094832
Number of sequences better than 0.0: 0