BLASTX 7.6.2
Query= UN44126 /QuerySize=1409
(1408 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13280.1 | Symbols: | FUNCTIONS IN: molecular... 129 4e-030
TAIR9_protein||AT3G62850.1 | Symbols: | zinc finger protein-rel... 71 2e-012
>TAIR9_protein||AT3G13280.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: stem, sperm cell, leaf whorl,
sepal, flower; EXPRESSED DURING: petal differentiation and expansion
stage; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF537
(InterPro:IPR007491); BEST Arabidopsis thaliana protein match is: zinc
ion binding (TAIR:AT1G01355.1); Has 66 Blast hits to 64 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 66;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr3:4295327-4297000 REVERSE
Length = 384
Score = 129 bits (324), Expect = 4e-030
Identities = 93/255 (36%), Positives = 138/255 (54%), Gaps = 13/255 (5%)
Frame = -1
Query: 991 MGYCPIPDGHDPLMVVRKIQMAVEKSGHVR-RNGEISITAIGSKLTEIP-GEDVMRTLSS 818
M CP+PDGHDP +V +I+ A+EKSG R R G + ITA+G+ LT+IP G++ +RTLSS
Sbjct: 1 MTTCPLPDGHDPRLVGPRIESALEKSGQWRCRRGPLFITAVGN-LTQIPGGDESLRTLSS 59
Query: 817 FEISLKLSHLYTHDLDEWTDANPPPSTMMIIDDHERIGWMASQLSDLEDAGYRILLAYPP 638
I+LK +H DL EWTD N P+T+M+I + + +AS L D+E GYRILLAYPP
Sbjct: 60 TGIALKHAHDIQRDLFEWTDENLAPATIMLITSSKDLKTLASTLYDIEKKGYRILLAYPP 119
Query: 637 QRDLAATTPFPRSFSKQWDWDALVFDDGQETTTTTTSLVF---SQGKYNDEYPFACEVCF 467
R LA + ++ WD+L+ D E +F + + P +
Sbjct: 120 -RALALRLSILKDVPEELFWDSLMADAAMEDNKQEQQDLFFRTTSAVKPVKLPCFAQNAI 178
Query: 466 VAVKSFEDFTAHLNSVEHEYGEWDRYASKNGVDRTIRENLPLGRSREMDVLLIQDMEWRL 287
+ K+ + + ++ V++ AS N VDR N+ LGRS+ I EW L
Sbjct: 179 LVPKALK-ISPRISRVKNMR---ILEASHNNVDRLDPANMVLGRSKAS--FNISSQEWDL 232
Query: 286 MKRKEHSHGLRSPQT 242
+ ++ ++ SP T
Sbjct: 233 LVTQDIAYHTSSPLT 247
>TAIR9_protein||AT3G62850.1 | Symbols: | zinc finger protein-related |
chr3:23237487-23239155 REVERSE
Length = 473
Score = 71 bits (172), Expect = 2e-012
Identities = 55/161 (34%), Positives = 83/161 (51%), Gaps = 27/161 (16%)
Frame = -1
Query: 1012 KAFVLWDMGYCPIPDGHDPLMVVRKIQMAVEKSGHVRRNGEISITAIGSKLTEIPGEDVM 833
K V WDM CPIP+G+D +V I+ A + G+ +G ISIT G + E P + ++
Sbjct: 15 KIAVWWDMKDCPIPEGYDARLVRPSIEAAFNELGY---SGPISITGYGDQ-RETPCQ-IL 69
Query: 832 RTLSSFEISL-------KLSHLYTHDLDEWTDANPPPSTMMIIDDHER--IGWMASQLSD 680
R LSS +++ + S +Y+ L EW D NPPP+TMM++ D + W S+L
Sbjct: 70 RGLSSTGVAVAQIIPESRCSLMYSSML-EWRDLNPPPATMMLVSDQWQHVFAWDLSRLQ- 127
Query: 679 LEDAGYRILLAYPPQRDLAATTPFPRSFSK---QWDWDALV 566
+ Y + LAY +T PF S + +W W L+
Sbjct: 128 -QHTKYNLFLAY-------STEPFAGSALRPCGEWIWRNLL 160
Score = 62 bits (148), Expect = 1e-009
Identities = 47/155 (30%), Positives = 78/155 (50%), Gaps = 21/155 (13%)
Frame = -1
Query: 1003 VLWDMGYCPIPDGHDPLMVVRKIQMAVEKSGHVRRNGEISITAIGSKLTEIPGEDVMRTL 824
V WDM CPIP+G+D V ++ A +K G+ +G +SIT G + P + ++R L
Sbjct: 242 VWWDMKDCPIPEGYDARQVRPSLEGAFKKLGY---SGPVSITGCGDH-NKTP-DHILREL 296
Query: 823 SSFEISLKLS---HLYTH---DLDEWTDANPPPSTMMIIDDHERIGWMASQLSDLEDAGY 662
SS + L S +Y+ ++ +W NPPP+T+M+I D + + L++ Y
Sbjct: 297 SSTGVDLAHSIDEVIYSRMFINMKQWKARNPPPATIMLISDGVVMMFENLIADLLQETKY 356
Query: 661 RILLAYPPQRDLAATTPFPRSF---SKQWDWDALV 566
+ LAY + P+ S S +W W +L+
Sbjct: 357 NLFLAY-------SYRPYKMSVLLTSAEWLWKSLL 384
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,429,833,604
Number of Sequences: 33410
Number of Extensions: 21429833604
Number of Successful Extensions: 670079363
Number of sequences better than 0.0: 0
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