BLASTX 7.6.2
Query= UN44252 /QuerySize=509
(508 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G34555.1 | Symbols: | 40S ribosomal protein S... 209 1e-054
TAIR9_protein||AT4G39200.1 | Symbols: | 40S ribosomal protein S... 201 2e-052
TAIR9_protein||AT2G21580.1 | Symbols: | 40S ribosomal protein S... 200 4e-052
TAIR9_protein||AT4G39200.2 | Symbols: | 40S ribosomal protein S... 195 2e-050
TAIR9_protein||AT2G21580.2 | Symbols: | 40S ribosomal protein S... 194 4e-050
TAIR9_protein||AT2G16360.1 | Symbols: | 40S ribosomal protein S... 147 5e-036
>TAIR9_protein||AT4G34555.1 | Symbols: | 40S ribosomal protein S25, putative |
chr4:16504381-16505339 REVERSE
Length = 109
Score = 209 bits (530), Expect = 1e-054
Identities = 103/109 (94%), Positives = 106/109 (97%)
Frame = +3
Query: 51 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSESPKFKL 230
MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSE+PKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKFKL 60
Query: 231 ITPSILSDRLRINGSLARKAIRDLMAKGTIRMVSTHSSQQIYTRATHN* 377
ITPSILSDRLRINGSLAR+AIR+LMAKGTIRMVS HSSQQIYTRATH *
Sbjct: 61 ITPSILSDRLRINGSLARRAIRELMAKGTIRMVSAHSSQQIYTRATHG* 109
>TAIR9_protein||AT4G39200.1 | Symbols: | 40S ribosomal protein S25 (RPS25E) |
chr4:18257464-18258464 FORWARD
Length = 109
Score = 201 bits (510), Expect = 2e-052
Identities = 98/109 (89%), Positives = 105/109 (96%)
Frame = +3
Query: 51 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSESPKFKL 230
MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLL+E+PKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 60
Query: 231 ITPSILSDRLRINGSLARKAIRDLMAKGTIRMVSTHSSQQIYTRATHN* 377
ITPSILSDR+RINGSLAR+AIR+LMAKG IRMV+ HSSQQIYTRAT+ *
Sbjct: 61 ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT* 109
>TAIR9_protein||AT2G21580.1 | Symbols: | 40S ribosomal protein S25 (RPS25B) |
chr2:9236629-9237510 FORWARD
Length = 109
Score = 200 bits (508), Expect = 4e-052
Identities = 98/109 (89%), Positives = 104/109 (95%)
Frame = +3
Query: 51 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSESPKFKL 230
MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ TYDKLL+E+PKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 60
Query: 231 ITPSILSDRLRINGSLARKAIRDLMAKGTIRMVSTHSSQQIYTRATHN* 377
ITPSILSDR+RINGSLAR+AIR+LMAKG IRMVS HSSQQIYTRAT+ *
Sbjct: 61 ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT* 109
>TAIR9_protein||AT4G39200.2 | Symbols: | 40S ribosomal protein S25 (RPS25E) |
chr4:18257464-18258464 FORWARD
Length = 108
Score = 195 bits (493), Expect = 2e-050
Identities = 97/109 (88%), Positives = 104/109 (95%), Gaps = 1/109 (0%)
Frame = +3
Query: 51 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSESPKFKL 230
MAPKKDKVPPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQATYDKLL+E+PKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQATYDKLLTEAPKFKL 59
Query: 231 ITPSILSDRLRINGSLARKAIRDLMAKGTIRMVSTHSSQQIYTRATHN* 377
ITPSILSDR+RINGSLAR+AIR+LMAKG IRMV+ HSSQQIYTRAT+ *
Sbjct: 60 ITPSILSDRMRINGSLARRAIRELMAKGVIRMVAAHSSQQIYTRATNT* 108
>TAIR9_protein||AT2G21580.2 | Symbols: | 40S ribosomal protein S25 (RPS25B) |
chr2:9236629-9237510 FORWARD
Length = 108
Score = 194 bits (491), Expect = 4e-050
Identities = 97/109 (88%), Positives = 103/109 (94%), Gaps = 1/109 (0%)
Frame = +3
Query: 51 MAPKKDKVPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSESPKFKL 230
MAPKKDKVPPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ TYDKLL+E+PKFKL
Sbjct: 1 MAPKKDKVPPPSSKPAKSGGGKQ-KKKWSKGKQKEKVNNMVLFDQGTYDKLLTEAPKFKL 59
Query: 231 ITPSILSDRLRINGSLARKAIRDLMAKGTIRMVSTHSSQQIYTRATHN* 377
ITPSILSDR+RINGSLAR+AIR+LMAKG IRMVS HSSQQIYTRAT+ *
Sbjct: 60 ITPSILSDRMRINGSLARRAIRELMAKGLIRMVSAHSSQQIYTRATNT* 108
>TAIR9_protein||AT2G16360.1 | Symbols: | 40S ribosomal protein S25 (RPS25A) |
chr2:7076713-7077366 REVERSE
Length = 126
Score = 147 bits (369), Expect = 5e-036
Identities = 75/83 (90%), Positives = 79/83 (95%)
Frame = +3
Query: 120 KKKKWSKGKQKEKVNNMVLFDQATYDKLLSESPKFKLITPSILSDRLRINGSLARKAIRD 299
+ +K SKGKQKEKVNNMVLFDQATYDKL+SE+PKFKLITPSILSDRLRINGSLARKAIRD
Sbjct: 40 ESRKRSKGKQKEKVNNMVLFDQATYDKLMSEAPKFKLITPSILSDRLRINGSLARKAIRD 99
Query: 300 LMAKGTIRMVSTHSSQQIYTRAT 368
LM KGTIRMVSTHSSQQI TRAT
Sbjct: 100 LMVKGTIRMVSTHSSQQINTRAT 122
Score = 52 bits (122), Expect = 2e-007
Identities = 21/32 (65%), Positives = 25/32 (78%)
Frame = +1
Query: 55 HRRRTKFHHHPPNPPNPEAESRRRRSGARESK 150
H+RRTK HHHP NPPNP AESR+R G ++ K
Sbjct: 21 HQRRTKSHHHPLNPPNPVAESRKRSKGKQKEK 52
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,429,833,604
Number of Sequences: 33410
Number of Extensions: 21429833604
Number of Successful Extensions: 670079363
Number of sequences better than 0.0: 0
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