Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN44302


BLASTX 7.6.2

Query= UN44302 /QuerySize=983
        (982 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G35520.1 | Symbols: MIS12, ATMIS12 | MIS12 (MI...    209   3e-054

>TAIR9_protein||AT5G35520.1 | Symbols: MIS12, ATMIS12 | MIS12 (MINICHROMOSOME
        INSTABILITY 12 (MIS12)-LIKE) | chr5:13701396-13703489 FORWARD

          Length = 286

 Score =  209 bits (531), Expect = 3e-054
 Identities = 123/212 (58%), Positives = 158/212 (74%), Gaps = 12/212 (5%)
 Frame = +3

Query: 114 MEGSKGEAVCDSMNLNPHLFINAALNIVQDVLDEAFHFYTLEASNLLKIDGRTDNNRSRE 293
           MEGSK EAV DSMNLNP +FIN A+N V+D +D+AF FY  +AS  LKI G +D  +S+ 
Sbjct:   1 MEGSKSEAVFDSMNLNPQIFINEAINSVEDYVDQAFDFYARDASKSLKIKG-SDKQKSQA 59

Query: 294 LSKGIDRVRDMIQSVLDNRLEMWEHYCLRYTFAVPEDFVLLPPKSDDQNI--QPLINDQE 467
           LS GI RVR ++ SV+DNRL++WE Y LR+ FAVP+ FVL  PKS++ +   Q  + D E
Sbjct:  60 LSNGIARVRGLLLSVIDNRLKLWESYSLRFCFAVPDGFVL--PKSEESSSVHQDGLYDLE 117

Query: 468 LDAELDSLRRKLHLVGNRSVELNSELQALERKSAS---NARLVNEVSKLYDQSSVD-MFE 635
           LDAELDSLR KL++VG RSVEL+SELQALER S S   + RLVNE  +LYD+SS+D +F+
Sbjct: 118 LDAELDSLRDKLNVVGKRSVELDSELQALERSSVSRERSLRLVNEALELYDESSMDEIFK 177

Query: 636 EMTEVALELRTGIINRLKARKMNAAAAESAKM 731
           EMT++A ELR   + RLK R+M   A+ESAK+
Sbjct: 178 EMTKMASELRAS-VERLKTRRMK--ASESAKV 206

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,524,927,668
Number of Sequences: 33410
Number of Extensions: 21524927668
Number of Successful Extensions: 675273654
Number of sequences better than 0.0: 0