BLASTX 7.6.2
Query= UN44340 /QuerySize=1012
(1011 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G48430.1 | Symbols: REF6 | REF6 (RELATIVE OF E... 297 1e-080
TAIR9_protein||AT5G04240.1 | Symbols: ELF6 | ELF6 (EARLY FLOWERI... 121 7e-028
TAIR9_protein||AT4G06634.1 | Symbols: | zinc finger (C2H2 type)... 55 5e-008
TAIR9_protein||AT4G06634.2 | Symbols: | zinc finger (C2H2 type)... 55 5e-008
TAIR9_protein||AT5G55040.1 | Symbols: | DNA binding | chr5:2232... 48 8e-006
TAIR9_protein||AT5G55040.2 | Symbols: | DNA binding | chr5:2232... 48 8e-006
>TAIR9_protein||AT3G48430.1 | Symbols: REF6 | REF6 (RELATIVE OF EARLY FLOWERING
6); nucleic acid binding / transcription factor/ zinc ion binding |
chr3:17935609-17940456 FORWARD
Length = 1361
Score = 297 bits (758), Expect = 1e-080
Identities = 154/235 (65%), Positives = 183/235 (77%), Gaps = 12/235 (5%)
Frame = -2
Query: 959 VYQQRGNI-----QASRIGGDYDSEDDSLEEQEGFSTRKRQTRSTAKRKVKTEMVEILRD 795
VYQQ G I QA+R+ G+YDS ++SLEE+ ST KRQTRSTAKR KT+ V+ RD
Sbjct: 1097 VYQQSGRISISNRQANRMVGEYDSAENSLEERGFCSTGKRQTRSTAKRIAKTKTVQSSRD 1156
Query: 794 TRGRRTLQQSGYRKKNQDLDPYMEGPSTRLRVRNLKPSRKSSETKP----KRGSSNASFS 627
T+G R LQ+ KKN++LD YMEGPSTRLRVR+ KPSR S ETKP K+ S NASFS
Sbjct: 1157 TKG-RFLQEFASGKKNEELDSYMEGPSTRLRVRHQKPSRGSLETKPKKIGKKRSGNASFS 1215
Query: 626 RVVSEEEELEEDAEEEEEEERAAAAASAYKCDIEGCTMSFSSEKQLSMHKRNICPVKGCG 447
RV + E+++EE EEEEEEE +AY+C++EGCTMSFSSEKQL +HKRNICP+KGCG
Sbjct: 1216 RVAT-EKDVEEKEEEEEEEENEEEECAAYQCNMEGCTMSFSSEKQLMLHKRNICPIKGCG 1274
Query: 446 KSFFSHKYLVQHRRVHSDDRPLKCPWKGCKMTFKWAWSRTEYIKGSHRGEALSLC 282
K+FFSHKYLVQH+RVHSDDRPLKCPWKGCKMTFKWAWSRTE+I+ H G +C
Sbjct: 1275 KNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIR-VHTGARPYVC 1328
Score = 84 bits (207), Expect = 1e-016
Identities = 37/44 (84%), Positives = 38/44 (86%)
Frame = -3
Query: 316 RVHTGERPYHCAEPGCGQTFRFVSDFSRHKKKTGHSAKKTKKR* 185
RVHTG RPY CAEP CGQTFRFVSDFSRHK+KTGHS KKT KR*
Sbjct: 1318 RVHTGARPYVCAEPDCGQTFRFVSDFSRHKRKTGHSVKKTNKR* 1361
>TAIR9_protein||AT5G04240.1 | Symbols: ELF6 | ELF6 (EARLY FLOWERING 6);
transcription factor | chr5:1169544-1174638 FORWARD
Length = 1341
Score = 121 bits (303), Expect = 7e-028
Identities = 61/184 (33%), Positives = 99/184 (53%), Gaps = 7/184 (3%)
Frame = -2
Query: 821 TEMVEI---LRDTRGRRTLQQSGYRKKNQDLD-PYMEGPSTRLRVRNLKPSRKSSETKPK 654
TE++E + + + +R ++ N + ++ P LR R + + + ET K
Sbjct: 1133 TEVIEAPNSMGEAKKKRKIESESETNDNPESSIGFIRSPCEGLRSRGKR--KATCETSLK 1190
Query: 653 RGSSNASFSRVVSEEEELEEDAEEEEEEERAAAAASAYKCDIEGCTMSFSSEKQLSMHKR 474
++ + +++ + A ++ +C +EGC M+F S+ +L HKR
Sbjct: 1191 HTETSDEEKKPIAKRLKKTPKACSGSRQQEVPTTTHPNRCYLEGCKMTFESKAKLQTHKR 1250
Query: 473 NICPVKGCGKSFFSHKYLVQHRRVHSDDRPLKCPWKGCKMTFKWAWSRTEYIKGSHRGEA 294
N C +GCGK F +HKYLV H+RVH D+RP +C WKGC MTFKW W+RTE+++ H GE
Sbjct: 1251 NRCTHEGCGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLR-LHTGER 1309
Query: 293 LSLC 282
+C
Sbjct: 1310 PYIC 1313
Score = 59 bits (141), Expect = 4e-009
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = -3
Query: 316 RVHTGERPYHCAEPGCGQTFRFVSDFSRHKKKTGH 212
R+HTGERPY C GCG +FRFVSD+SRH++KT H
Sbjct: 1303 RLHTGERPYICKVDGCGLSFRFVSDYSRHRRKTMH 1337
>TAIR9_protein||AT4G06634.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr4:3764499-3766439 REVERSE
Length = 388
Score = 55 bits (132), Expect = 5e-008
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Frame = -2
Query: 635 SFSRVVSEEEELEEDAEEEEEEERAAAAASAYKCDIEGCTMSFSSEKQLSMH------KR 474
+FSR+ +E+E E D E E E + C +GC +F L H ++
Sbjct: 53 TFSRL--KEKEKEPDVPEPEPE---PTTEILFLCSYDGCGKTFFDVSALRKHSHIHGERQ 107
Query: 473 NICPVKGCGKSFFSHKYLVQHRRVHSDDRPLKCPWKGCKMTFKWAWSRTEYIKGSHRGEA 294
+C +GCGK F L +H +H+ +R C ++GC F ++ ++K +H E
Sbjct: 108 YVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMK-THSQEN 166
Query: 293 LSLC 282
+C
Sbjct: 167 YHIC 170
Score = 51 bits (120), Expect = 1e-006
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Frame = -2
Query: 542 YKCDIEGCTMSFSSEKQLSMH------KRN-ICPVKGCGKSFFSHKYLVQHRRVHSDDRP 384
Y CD EGC F +L H +RN IC +GCGK+F L H + HS +
Sbjct: 108 YVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENY 167
Query: 383 LKCPWKGCKMTFKWAWSRTEYIKGSH 306
CP+ GC + + ++ H
Sbjct: 168 HICPYSGCVKRYAHEYKLKNHVAAYH 193
>TAIR9_protein||AT4G06634.2 | Symbols: | zinc finger (C2H2 type) family protein
| chr4:3764499-3766177 REVERSE
Length = 350
Score = 55 bits (132), Expect = 5e-008
Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 12/124 (9%)
Frame = -2
Query: 635 SFSRVVSEEEELEEDAEEEEEEERAAAAASAYKCDIEGCTMSFSSEKQLSMH------KR 474
+FSR+ +E+E E D E E E + C +GC +F L H ++
Sbjct: 15 TFSRL--KEKEKEPDVPEPEPE---PTTEILFLCSYDGCGKTFFDVSALRKHSHIHGERQ 69
Query: 473 NICPVKGCGKSFFSHKYLVQHRRVHSDDRPLKCPWKGCKMTFKWAWSRTEYIKGSHRGEA 294
+C +GCGK F L +H +H+ +R C ++GC F ++ ++K +H E
Sbjct: 70 YVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMK-THSQEN 128
Query: 293 LSLC 282
+C
Sbjct: 129 YHIC 132
Score = 51 bits (120), Expect = 1e-006
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 7/86 (8%)
Frame = -2
Query: 542 YKCDIEGCTMSFSSEKQLSMH------KRN-ICPVKGCGKSFFSHKYLVQHRRVHSDDRP 384
Y CD EGC F +L H +RN IC +GCGK+F L H + HS +
Sbjct: 70 YVCDQEGCGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENY 129
Query: 383 LKCPWKGCKMTFKWAWSRTEYIKGSH 306
CP+ GC + + ++ H
Sbjct: 130 HICPYSGCVKRYAHEYKLKNHVAAYH 155
>TAIR9_protein||AT5G55040.1 | Symbols: | DNA binding | chr5:22327727-22331703
REVERSE
Length = 917
Score = 48 bits (113), Expect = 8e-006
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Frame = -2
Query: 950 QRGNIQAS-RIGGDYDSEDDSLEEQEGFSTRKRQTRSTAKRKVKTEMVEILRDTRGR-RT 777
+RG Q + R D+D D EE E +KRQ + K+ + R R
Sbjct: 35 RRGQRQRNVRYNFDFDDYFDEEEEDEVEEEKKRQKKLKQVLKLNQSRARADPPVKSRARV 94
Query: 776 LQQSGYRKKNQDLDPYMEGPSTRLRVRNLKPSRKSSETKPKRGSSNASFSRVVSEEEELE 597
S Y +++++ D E R +K + + + + + + V EEEE E
Sbjct: 95 RHASDYEEEDEEDDEAEEEEEEVSEKRQVKKRKLNRQDEEEEEEEEKDYD--VEEEEEEE 152
Query: 596 E---DAEEEEEEERAAAAASAYKCDIEGCTMSFSSEKQLSM 483
E D+EEE+++ER +AS +CD T +K L +
Sbjct: 153 EGHADSEEEDDKERKRRSASGNQCDHSSETTPILDKKSLEL 193
>TAIR9_protein||AT5G55040.2 | Symbols: | DNA binding | chr5:22327727-22331703
REVERSE
Length = 917
Score = 48 bits (113), Expect = 8e-006
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 7/161 (4%)
Frame = -2
Query: 950 QRGNIQAS-RIGGDYDSEDDSLEEQEGFSTRKRQTRSTAKRKVKTEMVEILRDTRGR-RT 777
+RG Q + R D+D D EE E +KRQ + K+ + R R
Sbjct: 35 RRGQRQRNVRYNFDFDDYFDEEEEDEVEEEKKRQKKLKQVLKLNQSRARADPPVKSRARV 94
Query: 776 LQQSGYRKKNQDLDPYMEGPSTRLRVRNLKPSRKSSETKPKRGSSNASFSRVVSEEEELE 597
S Y +++++ D E R +K + + + + + + V EEEE E
Sbjct: 95 RHASDYEEEDEEDDEAEEEEEEVSEKRQVKKRKLNRQDEEEEEEEEKDYD--VEEEEEEE 152
Query: 596 E---DAEEEEEEERAAAAASAYKCDIEGCTMSFSSEKQLSM 483
E D+EEE+++ER +AS +CD T +K L +
Sbjct: 153 EGHADSEEEDDKERKRRSASGNQCDHSSETTPILDKKSLEL 193
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,524,927,668
Number of Sequences: 33410
Number of Extensions: 21524927668
Number of Successful Extensions: 675273654
Number of sequences better than 0.0: 0
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