BLASTX 7.6.2
Query= UN44448 /QuerySize=1506
(1505 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15217570|ref|NP_172436.1| F-box/LRR and kelch-repeat containi... 436 6e-120
gi|297819206|ref|XP_002877486.1| predicted protein [Arabidopsis ... 436 6e-120
gi|4582486|emb|CAA16923.2| putative protein [Arabidopsis thaliana] 328 2e-087
gi|297826891|ref|XP_002881328.1| predicted protein [Arabidopsis ... 294 4e-077
gi|297844048|ref|XP_002889905.1| predicted protein [Arabidopsis ... 286 8e-075
gi|297825781|ref|XP_002880773.1| predicted protein [Arabidopsis ... 282 1e-073
gi|297815006|ref|XP_002875386.1| predicted protein [Arabidopsis ... 268 2e-069
gi|297843766|ref|XP_002889764.1| F-box family protein [Arabidops... 263 9e-068
gi|15220334|ref|NP_172594.1| F-box and associated interaction do... 260 8e-067
gi|297849502|ref|XP_002892632.1| F-box family protein [Arabidops... 243 1e-061
gi|297852812|ref|XP_002894287.1| predicted protein [Arabidopsis ... 225 2e-056
gi|297849770|ref|XP_002892766.1| predicted protein [Arabidopsis ... 195 2e-047
gi|15221369|ref|NP_172711.1| F-box associated ubiquitination eff... 176 1e-041
gi|8778634|gb|AAF79642.1|AC025416_16 F5O11.24 [Arabidopsis thali... 176 1e-041
gi|297849494|ref|XP_002892628.1| predicted protein [Arabidopsis ... 161 3e-037
gi|15226266|ref|NP_180975.1| F-box protein [Arabidopsis thaliana] 158 2e-036
gi|28207096|gb|AAO37188.1| hypothetical protein [Arabidopsis tha... 158 3e-036
gi|297844114|ref|XP_002889938.1| predicted protein [Arabidopsis ... 148 4e-033
gi|297811765|ref|XP_002873766.1| predicted protein [Arabidopsis ... 143 1e-031
>gi|15217570|ref|NP_172436.1| F-box/LRR and kelch-repeat containing protein
[Arabidopsis thaliana]
Length = 382
Score = 436 bits (1120), Expect = 6e-120
Identities = 230/391 (58%), Positives = 277/391 (70%), Gaps = 19/391 (4%)
Frame = +2
Query: 86 MGKKRRLMMMMEEGLPHDVVEHIMERLPVRSLLRFKCVSKQWKSTIESRNFQERQLKHEE 265
M KK+R +MM E LPH+VVE I+ERL LLRFK VSKQWKSTIES FQ RQ +
Sbjct: 1 MSKKQRCLMM--ESLPHEVVECILERLDADPLLRFKAVSKQWKSTIESPFFQRRQFTQRQ 58
Query: 266 SGGRDPDVLMATESSQ--------RRYVLGSSSSVKIPNPW-GKENPTTGYFVSDNSCDG 418
G +PDVLM + + VLGSSSSVKIP PW +E Y VS +SCDG
Sbjct: 59 QSG-NPDVLMVSRCADINSEIEALTTLVLGSSSSVKIPTPWEEEEEEDKEYSVSQDSCDG 117
Query: 419 LVCLYHPLESGYVFNPATRWYRPLPLCQLQQVRISQGESYFELGHGLFKLGFGKDKITST 598
LVCL+ +SG+VFNPATRWY PLPLCQLQQ+ I+ G+ +++LG+ + +LGFGKDK+T T
Sbjct: 118 LVCLFDKFKSGFVFNPATRWYHPLPLCQLQQLLIAIGDGFYDLGYRVSRLGFGKDKLTGT 177
Query: 599 YKPVWLYNSSEIGLDNATTCEVFDFGANAWRYVTPSAPYRVVGVADPVFVHGSLHWLTDC 778
YKPVWLYNS EIGL+NATTCEVFDF NAWRYV+P+APYR+VG PV V GSLHW T+C
Sbjct: 178 YKPVWLYNSIEIGLENATTCEVFDFSTNAWRYVSPAAPYRIVGCPAPVCVDGSLHWFTEC 237
Query: 779 VETKVVSFDLHTEAFQVVSSKTPFPANSHDENPYSIILCNLDNRLCVSHMKWPDQVIWSF 958
ETK++SFDLHTE FQVV SK PF + + + I++CNLDNRLCVS MK P+QVIWSF
Sbjct: 238 EETKILSFDLHTETFQVV-SKAPFA----NVDGFDIVMCNLDNRLCVSEMKLPNQVIWSF 292
Query: 959 NSGNKTWEKLYSIDLVMNSCCFDCSTICAFRPLLLVDGGKKKKKKNLLFYDTVSSPYLLI 1138
NSGNKTW K+ SI+L + S F + +CA PL L+D GKKKKKK LLFY V +++
Sbjct: 293 NSGNKTWHKMCSINLDITSRWFGPTQVCAVLPLALLD-GKKKKKKKLLFYCRVRKRTMVV 351
Query: 1139 HDPEIQPDLFTFRCAQVMRFLVCYFQSLISI 1231
HD E + F A + VCYF SLISI
Sbjct: 352 HDDETKSYDVAFE-ADSIGHPVCYFPSLISI 381
>gi|297819206|ref|XP_002877486.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 362
Score = 436 bits (1120), Expect = 6e-120
Identities = 229/353 (64%), Positives = 260/353 (73%), Gaps = 24/353 (6%)
Frame = +2
Query: 83 MMGKKRRLMMMMEEGLPHDVVEHIMERLPVRSLLRFKCVSKQWKSTIESRNFQERQLKHE 262
M KK L MM E LPHD VE I+ERLP SLLRFK VSKQW STI+ + FQER L+
Sbjct: 1 MWSKKHCLRMM--ESLPHDAVELILERLPANSLLRFKAVSKQWNSTIQCQLFQERHLRQR 58
Query: 263 ESGGRDPDVLMAT----------ESSQRRYVLGSSSS-VKIPNPWGKENPTTGYFVSDNS 409
+ G DPDVLM + S VLGSSSS VKI PW KEN T Y VS +S
Sbjct: 59 QQLG-DPDVLMVSLRREDVINPDIESLTTLVLGSSSSPVKIHTPWEKEN--TDYLVSHSS 115
Query: 410 CDGLVCLYHPLESGYVFNPATRWYRPLPLCQLQQVRISQGESYFELGHGLFKLGFGKDKI 589
CDGLVCLY+P SG+V NP TRWYRPLP+C+LQQ+ I +S++ LG+GL+KLGFGKDK
Sbjct: 116 CDGLVCLYNPHHSGFVVNPTTRWYRPLPVCELQQLIIDLRDSFYLLGYGLYKLGFGKDKF 175
Query: 590 TSTYKPVWLYNSSEIGLDNATTCEVFDFGANAWRYVTPSAPYRVVGVADPVFVHGSLHWL 769
T TYKPVWLYNS EIGL+NATTCEVFDF NAWRYVTP+APYRVV DPV+V GSLHW
Sbjct: 176 TGTYKPVWLYNSLEIGLENATTCEVFDFTTNAWRYVTPAAPYRVVHFPDPVYVDGSLHWF 235
Query: 770 TDCVETKVVSFDLHTEAFQVVSSKTPFPANSHDENPYSIILCNLDNRLCVSHMKWPDQVI 949
TDC ETKVVSFDLHTEAFQV+ SK PF N ENP+ I++CNLDNRLCVS KWP+QVI
Sbjct: 236 TDCQETKVVSFDLHTEAFQVI-SKAPFAKN---ENPFDIVMCNLDNRLCVSQQKWPNQVI 291
Query: 950 WSFNSGNKTWEKLYSIDLVMNSCCFDCSTICAFRPLLLVDGGKKKKKKNLLFY 1108
WSF+S NKTWEK+YSID+ ++ ICA PL L+ GGKKKKKK LLFY
Sbjct: 292 WSFHSNNKTWEKMYSIDVTVS---LVGKHICALPPLALL-GGKKKKKKKLLFY 340
>gi|4582486|emb|CAA16923.2| putative protein [Arabidopsis thaliana]
Length = 796
Score = 328 bits (840), Expect = 2e-087
Identities = 169/282 (59%), Positives = 195/282 (69%), Gaps = 21/282 (7%)
Frame = +2
Query: 278 DPDVLMA----------TESSQRRYVLGSSSSVKIPNPWGKENPTTGYFVSDNSCDGLVC 427
DPDVLM T S R LGSSS+ KIP PW K+N Y VS +SCDGLVC
Sbjct: 515 DPDVLMVSVFPHHVINPTIESLRTLQLGSSSTFKIPTPWEKDNVL--YLVSHSSCDGLVC 572
Query: 428 LYHPLESGYVFNPATRWYRPLPLCQLQQVRISQGESYFELGHGLFKLGFGKDKITSTYKP 607
LY+ +SGYV NP TRWYRPLPLC Q++ I + Y++L F LGFGKDK TYKP
Sbjct: 573 LYNHDKSGYVVNPTTRWYRPLPLCDYQKLMIDLRDGYYKLKRKFFMLGFGKDKFRGTYKP 632
Query: 608 VWLYNSSEIGLDNATTCEVFDFGANAWRYVTPSAPYRVVGVADPVFVHGSLHWLTDCVET 787
VWLYNS+EIGL NATTCEVFDF NAWRYVT +APYR+ PV++ GSL+W T+C ET
Sbjct: 633 VWLYNSAEIGLKNATTCEVFDFSTNAWRYVTLAAPYRIAAYPAPVYLDGSLYWFTECKET 692
Query: 788 KVVSFDLHTEAFQVVSSKTPFPANSHDENPYSIILCNLDNRLCVSHMKWPDQVIWSFNSG 967
KV+ F+LHTE FQVV K PF + +PY I+ NLDNRLCVS MKWP+QVIWSFNSG
Sbjct: 693 KVLPFNLHTETFQVV-CKAPFA----NVDPYKIVFYNLDNRLCVSEMKWPNQVIWSFNSG 747
Query: 968 NKTWEKLYSIDLVMNSCCFDCSTICAFRPLLLVDGGKKKKKK 1093
NKTW+KL SI L +N + ICA PL L DG KKKKKK
Sbjct: 748 NKTWDKLCSIVLNLNF----VTGICAVLPLALFDGKKKKKKK 785
Score = 309 bits (791), Expect = 8e-082
Identities = 158/271 (58%), Positives = 186/271 (68%), Gaps = 9/271 (3%)
Frame = +2
Query: 287 VLMATESSQRRYVLGSSSSVKIPNPWGKENPTTGYFVSDNSCDGLVCLYHPLESGYVFNP 466
V+ T S R LGSSS+ KIP PW K+N Y VS +SCDGLVCLY+ +SGYV NP
Sbjct: 528 VINPTIESLRTLQLGSSSTFKIPTPWEKDNVL--YLVSHSSCDGLVCLYNHDKSGYVVNP 585
Query: 467 ATRWYRPLPLCQLQQVRISQGESYFELGHGLFKLGFGKDKITSTYKPVWLYNSSEIGLDN 646
TRWYRPLPLC Q++ I + Y++L F LGFGKDK TYKPVWLYNS+EIGL N
Sbjct: 586 TTRWYRPLPLCDYQKLMIDLRDGYYKLKRKFFMLGFGKDKFRGTYKPVWLYNSAEIGLKN 645
Query: 647 ATTCEVFDFGANAWRYVTPSAPYRVVGVADPVFVHGSLHWLTDCVETKVVSFDLHTEAFQ 826
ATTCEVFDF NAWRYVT +APYR+ PV++ GSL+W T+C ETKV+ F+LHTE FQ
Sbjct: 646 ATTCEVFDFSTNAWRYVTLAAPYRIAAYPAPVYLDGSLYWFTECKETKVLPFNLHTETFQ 705
Query: 827 VVSSKTPFPANSHDENPYSIILCNLDNRLCVSHMKWPDQVIWSFNSGNKTWEKLYSIDLV 1006
VV K PF + +PY I+ NLDNRLCVS MKWP+QVIWSFNSGNKTW+KL SI L
Sbjct: 706 VV-CKAPFA----NVDPYKIVFYNLDNRLCVSEMKWPNQVIWSFNSGNKTWDKLCSIVLN 760
Query: 1007 MNSCCFDCST--ICAFRPLLLVDGGKKKKKK 1093
+N C+ + F KKKKKK
Sbjct: 761 LNFVTGICAVLPLALFDGKKKKKKKKKKKKK 791
>gi|297826891|ref|XP_002881328.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 359
Score = 294 bits (751), Expect = 4e-077
Identities = 171/360 (47%), Positives = 218/360 (60%), Gaps = 52/360 (14%)
Frame = +2
Query: 128 LPHDVVEHIMERLPVRSLLRFKCVSKQWKSTIESRNFQERQLKHEESGGRDPDVLMATE- 304
LP+DVVEHI+ERL V++LL+FK VSKQWKSTI+ R FQERQL H G +PDVL+ +
Sbjct: 4 LPYDVVEHILERLDVKTLLKFKFVSKQWKSTIQCRAFQERQLMHRRQSG-NPDVLLVSVC 62
Query: 305 ----------SSQRRYVLGSSSSVKIPNPWGKENPTTGYFVSDNSCDGLVCLYHPLESGY 454
+ R V+GSS SV+I PW K T Y V +SCDGL+CLY+
Sbjct: 63 DESYLIGTELEAMRTLVVGSSVSVRILTPWEK----TLYKVCQSSCDGLICLYNDYPKNI 118
Query: 455 VFNPATRWYRPLPLCQLQQVRISQGESYFELGHGLFKLGFGKDKITSTYKPVWLYNSSEI 634
V NP TRW+R P Q++ S GES+ KLGFGKDKI TYKPVWLYNS+E+
Sbjct: 119 VVNPTTRWHRTFPRSTYQRL-TSHGESW-------AKLGFGKDKINGTYKPVWLYNSAEL 170
Query: 635 G--------LDNATTCEVFDFGANAWRYVTPSAPYRVVGVADPVFVHGSLHWLTDCVETK 790
G + +T CEVFDF + AWRYV P++PY ++ DPV+V GSLHWLT T
Sbjct: 171 GGLNDDDDNNNTSTICEVFDFTSKAWRYVVPASPYPILPYQDPVYVDGSLHWLTAGETTN 230
Query: 791 VVSFDLHTEAFQVVSSKTPFPANSHDENPYSIILCNLDNRLCVSHMKWPDQVIWSFNSGN 970
V+SFDLHTE FQV+ SK PF + HD + +++ KWP+QVIWS +S +
Sbjct: 231 VLSFDLHTETFQVM-SKAPF-LHHHDHSNRELVI-----------KKWPNQVIWSLDSDH 277
Query: 971 KTWEKLYSIDLVMNSCCFDCSTICAFRPLLLVDGGKKKKKKNLLFYDTVSSPYLLIHDPE 1150
KTW+++YSIDL + S F A PL +VD K LLF + S L+ HDP+
Sbjct: 278 KTWKEIYSIDLNITSFWFGKHRF-ALTPLAVVD------KDKLLFCEPNSGDQLVTHDPK 330
>gi|297844048|ref|XP_002889905.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 389
Score = 286 bits (731), Expect = 8e-075
Identities = 164/355 (46%), Positives = 216/355 (60%), Gaps = 27/355 (7%)
Frame = +2
Query: 122 EGLPHDVVEHIMERLPVRSLLRFKCVSKQWKSTIESRNFQERQLKHEESGGRDPDVLMAT 301
E LPHDVVE I+E+LPV+ LLR K VSK+WKSTIES F+ERQ + R DVL +
Sbjct: 30 ELLPHDVVELILEKLPVKPLLRLKSVSKRWKSTIESHRFKERQFICRKQ-SRGIDVLFVS 88
Query: 302 ----ESSQRRYVLGSS--SSVKIPNPWGKENPTTGYFVSDNSCDGLVCLYHPLESGYVFN 463
E+ R VLGSS S+V+ PT+ SCDGL+CLY + +V N
Sbjct: 89 LGDDEARGMRIVLGSSIVSTVRF--------PTSCTVFCHGSCDGLLCLYSLNDPSFVVN 140
Query: 464 PATRWYRPLPLCQLQQVRISQGESYFELGHGLFKLGFGKDKITSTYKPVWLYNSSEIGLD 643
PATRW++ PL +++ + + L KLGFG+DK+ TYKPVWLYNSSE GL+
Sbjct: 141 PATRWHQSFPLSSYRELIFDRLKIKGALDITCAKLGFGRDKVRGTYKPVWLYNSSEYGLE 200
Query: 644 NATTCEVFDFGANAWRYVTPSAPYRVVGVADPVFVHGSLHWLTDCVETKVVSFDLHTEAF 823
N TTCEVFDF NAWR++ ++ YR++G PV++ GSL+W T+C ETKV+SFDLHTE F
Sbjct: 201 NITTCEVFDFSTNAWRFLHQASLYRILGDHYPVYLDGSLYWFTECEETKVLSFDLHTETF 260
Query: 824 QVVSSKTPFPANSHDENPYSIILCNLDNRLCVSHMKWPDQVIWSFNS--GNKTWEKLYSI 997
QV+ SKTPFP H +P +C LDNRLCVS WP QVIWSF+S G + W+KL SI
Sbjct: 261 QVI-SKTPFP---HVLDPLGFTMCILDNRLCVSETNWPTQVIWSFDSSGGMEPWKKLCSI 316
Query: 998 DLVMNSCCFDCSTICAFRPLLLVDGGK-----KKKKKNLLFYDTVSSPYLLIHDP 1147
DL + + P+ ++D K + + + YD + Y ++ P
Sbjct: 317 DLTETISLYG-KAVSRLFPIAILDKTKLLLHSRSYLQPAVIYDLQTKSYGVLFTP 370
>gi|297825781|ref|XP_002880773.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 282 bits (720), Expect = 1e-073
Identities = 155/350 (44%), Positives = 205/350 (58%), Gaps = 14/350 (4%)
Frame = +2
Query: 119 EEGLPHDVVEHIMERLPVRSLLRFKCVSKQWKSTIESRNFQERQLKHEESGGRDPDVLMA 298
EE LPHDV+E I+ERLPV++LL F+ VSK+WKSTI+SR F+ER+L+ R VL
Sbjct: 11 EELLPHDVIELILERLPVQALLVFRSVSKKWKSTIDSRRFKERRLQRRRH-SRGVYVLFL 69
Query: 299 TESSQRRYVLGSSSSVKIPNPWGKEN--PTTGYFVSDNSCDGLVCLYHPLESGYVFNPAT 472
+ + + + + P +G SCDG+VCLY V NPAT
Sbjct: 70 CVNGENTLKRDDNRVFSFGSSVARTGRIPNSGPLFCYGSCDGIVCLYGIHTPSIVVNPAT 129
Query: 473 RWYRPLPLCQLQQVRISQGESYFELGHGLFKLGFGKDKITSTYKPVWLYNSSEIGLDNAT 652
WY+ PLC QQ+ I + + ++ KLG GKDK+T TYKPVWLYNSS GL+NAT
Sbjct: 130 GWYQNFPLCNYQQLYIPRFDKK-DVNFPSPKLGLGKDKLTGTYKPVWLYNSSIFGLENAT 188
Query: 653 TCEVFDFGANAWRYVTPSAPYRVVGVADPVFVHGSLHWLTDCVETKVVSFDLHTEAFQVV 832
TCE+FDF NAWRYV ++PY++ PV++ GSL+W TDC E KV+S DLHTE FQV+
Sbjct: 189 TCELFDFTTNAWRYVVLASPYQINAYHKPVYLDGSLYWFTDCEEPKVLSLDLHTETFQVI 248
Query: 833 SSKTPFPANSHDENPYSIILCNLDNRLCVSHMKWPDQVIWSFNSGNKTWEKLYSIDLVMN 1012
K PF +H +P + +C LDNRLCVS KWP QVIWSF+ KTW ++ IDL
Sbjct: 249 -CKAPF---AHPCDPRQLTMCILDNRLCVSEKKWPTQVIWSFHPSGKTWNQMCCIDLTQT 304
Query: 1013 SCCFDCSTICAFRPLLLVDGGK-----KKKKKNLLFYDTVSSPYLLIHDP 1147
F A P+ ++D GK + L+ +D + Y + P
Sbjct: 305 FSWFGVPKF-ALSPIAIMDKGKLLLQGRDTSHALVIHDLHTKSYEFLFKP 353
>gi|297815006|ref|XP_002875386.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 268 bits (684), Expect = 2e-069
Identities = 162/331 (48%), Positives = 201/331 (60%), Gaps = 30/331 (9%)
Frame = +2
Query: 80 MMMGKKRRLMMMMEEGLPHDVVEHIMERLPVRSLLRFKCVSKQWKSTIESRNFQERQLKH 259
+++G KR ++ LPHD VE I+ERLPV SLL+FK VSK WKSTIESR F+ERQL
Sbjct: 10 VVVGLKRHRSSVVGLLLPHDAVELILERLPVESLLKFKSVSKNWKSTIESRCFKERQLIR 69
Query: 260 EESGGRDPDVLMA--TESSQRRY----VLGSS--SSVKIPNPWGKENPTTGYFVSDNSCD 415
+ R PDVL+ T S Y LGSS S+V++P ++G + SCD
Sbjct: 70 RKQ-SRGPDVLLVPLTWSCDGIYAESIALGSSIVSTVRLPT-------SSGSRICHGSCD 121
Query: 416 GLVCLYHPLESGYVFNPATRWYRPLPLCQLQQVRISQGESYFELGHGLF---KLGFGKDK 586
GL+CLY V NPAT W++ PL LQ + + + + H F LGFG+DK
Sbjct: 122 GLLCLYCVYTPSVVVNPATGWHQTFPLSNLQLLCLDMYDKPED--HDFFPMPNLGFGRDK 179
Query: 587 ITSTYKPVWLYNSSEIGLDNATTCEVFDFGANAWRYVTPSAPYRVVGVADPVFVHGSLHW 766
T TYKPVWLYNSS+ GL NATTCEVFDF N WRYV PS P+R+ +PV++ GSLHW
Sbjct: 180 FTGTYKPVWLYNSSDFGLPNATTCEVFDFSTNTWRYVHPSPPHRIDDFINPVYLDGSLHW 239
Query: 767 LTDC-VETKVVSFDLHTEAFQVVSSKTPFPANSHDENPYSIILCNLDNRLCVSHMKWPDQ 943
L + ETKV+SFDLH+E F V+ K PF + D P+S + LDNRLCVS Q
Sbjct: 240 LAEGEEETKVLSFDLHSETFHVL-CKAPF---ARDHFPFSHNMFILDNRLCVSEQDSSTQ 295
Query: 944 VIWSFNSG----NKTWEKLYSIDLVMNSCCF 1024
VIWSF+S NKTW KL SID+ F
Sbjct: 296 VIWSFHSSGGNKNKTWNKLCSIDVTRTRSWF 326
>gi|297843766|ref|XP_002889764.1| F-box family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 374
Score = 263 bits (670), Expect = 9e-068
Identities = 124/189 (65%), Positives = 146/189 (77%), Gaps = 1/189 (0%)
Frame = +2
Query: 284 DVLMATESSQRRYVLGSSSSVKIPNPWGKENPTTGYFVSDNSCDGLVCLYHPLESGYVFN 463
DV+ + VLGSSSSVKIP PW ++ T Y VS +SCDGLVCL++ +SG+V N
Sbjct: 74 DVINLDIEALATLVLGSSSSVKIPTPWEEKEEDTEYLVSRDSCDGLVCLFNIRKSGFVVN 133
Query: 464 PATRWYRPLPLCQLQQVRISQGESYFELGHGLFKLGFGKDKITSTYKPVWLYNSSEIGLD 643
P TRWY PLP CQLQQV G+S+++LG+ L KLGFGKDK+T TYKPVWLYNS EIGL+
Sbjct: 134 PTTRWYHPLPPCQLQQVITGLGDSFYDLGYRLSKLGFGKDKLTGTYKPVWLYNSLEIGLE 193
Query: 644 NATTCEVFDFGANAWRYVTPSAPYRVVGVADPVFVHGSLHWLTDCVETKVVSFDLHTEAF 823
NATTCEVFDF NAWRYV+P+APYR+VG PV V GSLHW T+C ETK++SFDLHTE F
Sbjct: 194 NATTCEVFDFSTNAWRYVSPAAPYRIVGCPSPVCVDGSLHWFTECEETKILSFDLHTETF 253
Query: 824 QVVSSKTPF 850
QVV SK PF
Sbjct: 254 QVV-SKAPF 261
>gi|15220334|ref|NP_172594.1| F-box and associated interaction domain-containing
protein [Arabidopsis thaliana]
Length = 312
Score = 260 bits (662), Expect = 8e-067
Identities = 151/303 (49%), Positives = 189/303 (62%), Gaps = 25/303 (8%)
Frame = +2
Query: 95 KRRLMMMMEEGLPHDVVEHIMERLPVRSLLRFKCVSKQWKSTIESRNFQERQL-KHEESG 271
KR +++ LPHDVV I+ERLPV SLLRFKCVS QWKSTIES+ FQERQL + ES
Sbjct: 24 KRHCSSVVKLLLPHDVVGLILERLPVESLLRFKCVSNQWKSTIESQCFQERQLIRRMES- 82
Query: 272 GRDPDVLMAT-----ESSQRRYVLGSS--SSVKIPNPWGKENPTTGYFVSDNSCDGLVCL 430
R PDVL+ + + R+ V GSS S+ + PT + SC+GL+C+
Sbjct: 83 -RGPDVLVVSFADDEDKYGRKAVFGSSIVSTFRF--------PTLHTLICYGSCEGLICI 133
Query: 431 YHPLESGYVFNPATRWYRPLPLCQLQQVRISQGESYFELGHGLFKLGFGKDKITSTYKPV 610
Y V NPAT+W+R PL LQQ + E E KL FGKDK+ TYK V
Sbjct: 134 YCVYSPNIVVNPATKWHRSCPLSNLQQFLDDKFEKK-EYDFPTPKLAFGKDKLNGTYKQV 192
Query: 611 WLYNSSEIGLDNATTCEVFDFGANAWRYVTPSAPYRVVGVADPVFVHGSLHWLTDCVETK 790
WLYNSSE LD+ TTCEVFDF NAWRYV P++PYR+ DPV+ GS+HWLT+ E+K
Sbjct: 193 WLYNSSEFRLDDVTTCEVFDFSNNAWRYVHPASPYRINDYQDPVYSDGSVHWLTEGKESK 252
Query: 791 VVSFDLHTEAFQVVSSKTPFPANSHDENPYSIILCNLDNRLCVSHMKWPDQVIWSFNS-- 964
++SF LHTE FQV+ + PF + +P +C LDNRLCVS + P Q+IWS +S
Sbjct: 253 ILSFHLHTETFQVL-CEAPF---LRERDPVGDSMCILDNRLCVSEINGPAQLIWSLDSSG 308
Query: 965 GNK 973
GNK
Sbjct: 309 GNK 311
>gi|297849502|ref|XP_002892632.1| F-box family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 309
Score = 243 bits (618), Expect = 1e-061
Identities = 146/311 (46%), Positives = 180/311 (57%), Gaps = 43/311 (13%)
Frame = +2
Query: 95 KRRLMMMMEEGLPHDVVEHIMERLPVRSLLRFKCVSKQWKSTIESRNFQERQLKHEESGG 274
KR +++ LPHDVV I+ERLPV SLLRFK ERQL
Sbjct: 22 KRHRSSVVKLLLPHDVVGLILERLPVESLLRFK---------------SERQLIRRMQ-S 65
Query: 275 RDPDVLMAT----------ESSQRRYVLGSS--SSVKIPNPWGKENPTTGYFVSDNSCDG 418
R PDVL+ + +++RR V GSS S+ + PT + SCDG
Sbjct: 66 RGPDVLVVSFADDNNGDDEATTERRIVFGSSIVSTFRF--------PTWNTLLCYGSCDG 117
Query: 419 LVCLYHPLESGYVFNPATRWYRPLPLCQLQQVRISQGESYFELGHGLFKLGFGKDKITST 598
LVC+Y V NPAT+W+R PL LQQ I + + E KLGFGKDK+ T
Sbjct: 118 LVCIYCFYSPNIVVNPATKWHRSCPLSNLQQFLIDKYDKQ-ECDFPDPKLGFGKDKLKGT 176
Query: 599 YKPVWLYNSSEIGLDNATTCEVFDFGANAWRYVTPSAPYRVVGVADPVFVHGSLHWLTDC 778
+K VWLYNSSE GLDN TTCEVFDF NAWRYV P++PYR+ DPV+ GSLHWLT+
Sbjct: 177 FKQVWLYNSSEFGLDNVTTCEVFDFSTNAWRYVHPASPYRINDYQDPVYFDGSLHWLTEG 236
Query: 779 VETKVVSFDLHTEAFQVVSSKTPFPANSHDENPYSIILCNLDNRLCVSHMKWPDQVIWSF 958
E K++SFDLHTE FQV+ K PF + +P +C LDNRLCVS + Q+IWS
Sbjct: 237 KECKILSFDLHTETFQVI-CKAPFLC---ERDPVGDTMCILDNRLCVSEINGSAQLIWSL 292
Query: 959 NS--GNKTWEK 985
+S GNKTW+K
Sbjct: 293 DSSGGNKTWKK 303
>gi|297852812|ref|XP_002894287.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 372
Score = 225 bits (572), Expect = 2e-056
Identities = 103/146 (70%), Positives = 118/146 (80%), Gaps = 3/146 (2%)
Frame = +2
Query: 527 GESYFELGHGLFKLGFGKDKITSTYKPVWLYNSSEIGLDNATTCEVFDFGANAWRYVTPS 706
G +YF+L H FKL FGKD + T+KPVWLYNSSEI + NATTCEVFDF NAWRYVTPS
Sbjct: 116 GVAYFKLKHPHFKLAFGKDTFSGTFKPVWLYNSSEISIQNATTCEVFDFSTNAWRYVTPS 175
Query: 707 APYRVVGVADPVFVHGSLHWLTDCVETKVVSFDLHTEAFQVVSSKTPFPANSHDENPYSI 886
APYRV+G+ DPVF+ GSLHW TDC ETK++S DLHTEAFQV+ SK PF H PY I
Sbjct: 176 APYRVLGLPDPVFLDGSLHWFTDCQETKILSMDLHTEAFQVI-SKAPFA--DHVVRPYDI 232
Query: 887 ILCNLDNRLCVSHMKWPDQVIWSFNS 964
++CNLDNRLCVS MKWP+Q+IWSFNS
Sbjct: 233 VMCNLDNRLCVSEMKWPNQLIWSFNS 258
>gi|297849770|ref|XP_002892766.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 195 bits (495), Expect = 2e-047
Identities = 108/201 (53%), Positives = 132/201 (65%), Gaps = 17/201 (8%)
Frame = +2
Query: 122 EGLPHDVVEHIMERLPVRSLLRFKCVSKQWKSTIESRNFQERQLKHEESGGRDPDVLMAT 301
E LPHDVVE I+ERLPV SLLRFK +SK WKSTIES+ F+ERQL + R PDVL +
Sbjct: 10 ELLPHDVVELILERLPVNSLLRFKSLSKDWKSTIESKRFEERQLIRRKQ-SRGPDVLYVS 68
Query: 302 ---ESSQRRYVLGSS--SSVKIPNPWGKENPTTGYFVSDNSCDGLVCLYHPLESGYVFNP 466
+ + +R V GSS S++K PT V SCDGLVCLY G+V NP
Sbjct: 69 LHDDEAPKRIVFGSSIVSTIKF--------PTICSIVCYGSCDGLVCLYCVSTPGFVVNP 120
Query: 467 ATRWYRPLPLCQLQQVRISQ-GESYFELGHGLFKLGFGKDKITSTYKPVWLYNSSEIGLD 643
TRW++ PL QQ+R+++ + F + +KLGFGKDK+ TYK VWLYNSSE GLD
Sbjct: 121 VTRWHQSFPLSSFQQLRMARLNKGDFHAPN--YKLGFGKDKVKGTYKLVWLYNSSEYGLD 178
Query: 644 NATTCEVFDFGANAWRYVTPS 706
N TTCEVFDF NAWRY+ P+
Sbjct: 179 NVTTCEVFDFSTNAWRYLVPA 199
>gi|15221369|ref|NP_172711.1| F-box associated ubiquitination effector family
protein [Arabidopsis thaliana]
Length = 352
Score = 176 bits (445), Expect = 1e-041
Identities = 81/110 (73%), Positives = 91/110 (82%)
Frame = +2
Query: 389 YFVSDNSCDGLVCLYHPLESGYVFNPATRWYRPLPLCQLQQVRISQGESYFELGHGLFKL 568
+ VS +SCDGLVCLY +SGYV NP TRWYRPLPL QLQQ+ IS G S FELG+ + +
Sbjct: 100 FLVSFDSCDGLVCLYKYWKSGYVVNPTTRWYRPLPLSQLQQLLISLGRSVFELGYTVCDI 159
Query: 569 GFGKDKITSTYKPVWLYNSSEIGLDNATTCEVFDFGANAWRYVTPSAPYR 718
GFGKDKIT TYKPVWLYNS EIGL+NATTCEVFDF NAWRYV+P+APYR
Sbjct: 160 GFGKDKITGTYKPVWLYNSLEIGLENATTCEVFDFNTNAWRYVSPTAPYR 209
>gi|8778634|gb|AAF79642.1|AC025416_16 F5O11.24 [Arabidopsis thaliana]
Length = 361
Score = 176 bits (445), Expect = 1e-041
Identities = 81/110 (73%), Positives = 91/110 (82%)
Frame = +2
Query: 389 YFVSDNSCDGLVCLYHPLESGYVFNPATRWYRPLPLCQLQQVRISQGESYFELGHGLFKL 568
+ VS +SCDGLVCLY +SGYV NP TRWYRPLPL QLQQ+ IS G S FELG+ + +
Sbjct: 109 FLVSFDSCDGLVCLYKYWKSGYVVNPTTRWYRPLPLSQLQQLLISLGRSVFELGYTVCDI 168
Query: 569 GFGKDKITSTYKPVWLYNSSEIGLDNATTCEVFDFGANAWRYVTPSAPYR 718
GFGKDKIT TYKPVWLYNS EIGL+NATTCEVFDF NAWRYV+P+APYR
Sbjct: 169 GFGKDKITGTYKPVWLYNSLEIGLENATTCEVFDFNTNAWRYVSPTAPYR 218
>gi|297849494|ref|XP_002892628.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 299
Score = 161 bits (407), Expect = 3e-037
Identities = 99/211 (46%), Positives = 121/211 (57%), Gaps = 24/211 (11%)
Frame = +2
Query: 95 KRRLMMMMEEGLPHDVVEHIMERLPVRSLLRFKCVSKQWKSTIESRNFQERQLKHEESGG 274
K+RL + + E LPHD+VE I++RLPV+ LLRFK VSK WKSTIES+ FQE L
Sbjct: 41 KKRLCLSL-EFLPHDLVELILQRLPVKPLLRFKSVSKNWKSTIESQRFQEGNLICSRQ-A 98
Query: 275 RDPDVLM--------ATESSQRRYV---LGSSSSVKIPNPWGKENPTTGYFVSDNSCDGL 421
PDVL+ A S R V L ++S V+ P +G CDGL
Sbjct: 99 LGPDVLLMSLCEKGDAGLSGHARTVMFSLATASKVRF--------PFSGSMFCYGHCDGL 150
Query: 422 VCLYHPLESGYVFNPATRWYRPLPLCQLQQVRISQ-GESYFELGHGLFKLGFGKDKITST 598
VC Y +V NPAT+W+R PL QQ+ I + YF+ FKLG G+DK
Sbjct: 151 VCFYCVYAPSFVMNPATKWHRSFPLSGYQQLVIERYNRLYFKFIS--FKLGLGRDKFRGI 208
Query: 599 YKPVWLYNSSEIGLDNATTCEVFDFGANAWR 691
YK VWLY+SSE GLDN TTCE+FDF NAWR
Sbjct: 209 YKAVWLYSSSEYGLDNVTTCELFDFSTNAWR 239
>gi|15226266|ref|NP_180975.1| F-box protein [Arabidopsis thaliana]
Length = 391
Score = 158 bits (399), Expect = 2e-036
Identities = 79/146 (54%), Positives = 102/146 (69%), Gaps = 3/146 (2%)
Frame = +2
Query: 641 DNATTCEVFDFGANAWRYVTPSAPYRVVGVADPVFVHGSLHWLTDCVETKVVSFDLHTEA 820
+ +T CEVFDF AWR+V P++PYR++ DPV+V GSLHWLT+ T V+SFDLH E
Sbjct: 202 NTSTFCEVFDFTTKAWRFVVPASPYRILPYQDPVYVDGSLHWLTEGETTNVLSFDLHAET 261
Query: 821 FQVVSSKTPFPANSHDENPYSIILCNLDNRLCVSHMKWPDQVIWSFNSGNKTWEKLYSID 1000
FQVV SK PF + HD + +I+CNLD+RLCVS WP+QVIWS +S +KTW+++YSID
Sbjct: 262 FQVV-SKAPF-LHHHDYSSRELIMCNLDDRLCVSEKMWPNQVIWSLDSDHKTWKEIYSID 319
Query: 1001 LVMNSCCFDCSTICAFRPLLLVDGGK 1078
L + S F S A RPL + D K
Sbjct: 320 LNITSSLFG-SNGFALRPLGVFDKDK 344
>gi|28207096|gb|AAO37188.1| hypothetical protein [Arabidopsis thaliana]
Length = 391
Score = 158 bits (398), Expect = 3e-036
Identities = 79/146 (54%), Positives = 102/146 (69%), Gaps = 3/146 (2%)
Frame = +2
Query: 641 DNATTCEVFDFGANAWRYVTPSAPYRVVGVADPVFVHGSLHWLTDCVETKVVSFDLHTEA 820
+ +T CEVFDF AWR+V P++PYR++ DPV+V GSLHWLT+ T V+SFDLH E
Sbjct: 202 NTSTFCEVFDFTTKAWRFVVPASPYRILPYQDPVYVDGSLHWLTEGETTNVLSFDLHAET 261
Query: 821 FQVVSSKTPFPANSHDENPYSIILCNLDNRLCVSHMKWPDQVIWSFNSGNKTWEKLYSID 1000
FQVV SK PF + HD + +I+CNLD+RLCVS WP+QVIWS +S +KTW+++YSID
Sbjct: 262 FQVV-SKAPF-LHHHDYSSRELIMCNLDDRLCVSEKMWPNQVIWSLDSDHKTWKEVYSID 319
Query: 1001 LVMNSCCFDCSTICAFRPLLLVDGGK 1078
L + S F S A RPL + D K
Sbjct: 320 LNITSSLFG-SNGFALRPLGVFDKDK 344
>gi|297844114|ref|XP_002889938.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 177
Score = 148 bits (371), Expect = 4e-033
Identities = 69/100 (69%), Positives = 80/100 (80%), Gaps = 6/100 (6%)
Frame = +2
Query: 566 LGFGKDKITSTYKPVWLYNSSEIGLDNA-----TTCEVFDFGANAWRYVTPSAPYRVVGV 730
+GFGKDKIT TYKPVWLY+S EIGL+NA TTCEVFDF +AWRYV+P+APYRV G
Sbjct: 37 IGFGKDKITGTYKPVWLYSSLEIGLENARFSTLTTCEVFDFNTDAWRYVSPAAPYRVFGN 96
Query: 731 ADPVFVHGSLHWLTDCVETKVVSFDLHTEAFQVVSSKTPF 850
+ P+ + GSLHW DC ETK++SFDLHTE FQVV SK PF
Sbjct: 97 SKPICIDGSLHWFNDCEETKILSFDLHTETFQVV-SKAPF 135
>gi|297811765|ref|XP_002873766.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 320
Score = 143 bits (359), Expect = 1e-031
Identities = 83/170 (48%), Positives = 99/170 (58%), Gaps = 20/170 (11%)
Frame = +2
Query: 98 RRLMMMMEEGLPHDVVEHIMERLPVRSLLRFKCVSKQWKSTIESRNFQERQLKHEESGGR 277
R+ M ME LPH VVE I+E L V SLLRFK VSKQWKSTIES+ FQ + L H G
Sbjct: 3 RKRCMRMESLLPHHVVERILESLEVNSLLRFKAVSKQWKSTIESQFFQGKHLTHRLQSG- 61
Query: 278 DPDVLMATESSQ--------RRYVLGSSSSVKIPNPWGKENPTTGYFVSDNSCDGLVCLY 433
D DVLM + + VLGSSSSVKIP PW + + YFVS NSCDGLVCLY
Sbjct: 62 DSDVLMVAVHNDDPLHVETLKTLVLGSSSSVKIPTPWEENDKDRYYFVSYNSCDGLVCLY 121
Query: 434 HPLESGYVFNPATRW-----------YRPLPLCQLQQVRISQGESYFELG 550
P E G+V NP TRW Y+P+ L ++ I + + E+G
Sbjct: 122 QPKEPGFVVNPTTRWLGFGKDIFTATYKPVWLYTSTEIGIEETATTCEMG 171
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,837,552,758,913
Number of Sequences: 15229318
Number of Extensions: 4837552758913
Number of Successful Extensions: 1137592257
Number of sequences better than 0.0: 0
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