BLASTX 7.6.2
Query= UN44453 /QuerySize=615
(614 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G19740.1 | Symbols: | 60S ribosomal protein L... 235 2e-062
TAIR9_protein||AT5G56710.1 | Symbols: | 60S ribosomal protein L... 221 4e-058
TAIR9_protein||AT4G26230.1 | Symbols: | 60S ribosomal protein L... 220 5e-058
TAIR9_protein||AT5G56710.2 | Symbols: | 60S ribosomal protein L... 102 3e-022
>TAIR9_protein||AT2G19740.1 | Symbols: | 60S ribosomal protein L31 (RPL31A) |
chr2:8513577-8514346 FORWARD
Length = 120
Score = 235 bits (599), Expect = 2e-062
Identities = 116/120 (96%), Positives = 119/120 (99%)
Frame = +1
Query: 94 MEKGKGRKEEIVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 273
MEKGKGRKEE+VTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN
Sbjct: 1 MEKGKGRKEEVVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 60
Query: 274 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFYSLVTVAEIPAEGLSGLGTKVIEEDE* 453
KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEF+SLVTVAEIPAEGLSGLGTKVIEE+E*
Sbjct: 61 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEEE* 120
>TAIR9_protein||AT5G56710.1 | Symbols: | 60S ribosomal protein L31 (RPL31C) |
chr5:22944003-22944767 REVERSE
Length = 120
Score = 221 bits (561), Expect = 4e-058
Identities = 108/120 (90%), Positives = 114/120 (95%)
Frame = +1
Query: 94 MEKGKGRKEEIVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 273
M + KGRKEE++TREYTINLHRRLH CTFKKKAP AIKEIRKFA KAMGTKDVRVDVKLN
Sbjct: 1 MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVDVKLN 60
Query: 274 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFYSLVTVAEIPAEGLSGLGTKVIEEDE* 453
KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEF+SLVTVAEIPAEGLSGLGTKVIEE++*
Sbjct: 61 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKVIEEED* 120
>TAIR9_protein||AT4G26230.1 | Symbols: | 60S ribosomal protein L31 (RPL31B) |
chr4:13286026-13286553 FORWARD
Length = 120
Score = 220 bits (560), Expect = 5e-058
Identities = 108/120 (90%), Positives = 114/120 (95%)
Frame = +1
Query: 94 MEKGKGRKEEIVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVDVKLN 273
M + KGRKEE+VTREYTINLHRRLHSCTFKKKAP AIKEIRKFA K MGTKDVRVDVKLN
Sbjct: 1 MSEKKGRKEEVVTREYTINLHRRLHSCTFKKKAPKAIKEIRKFAEKEMGTKDVRVDVKLN 60
Query: 274 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFYSLVTVAEIPAEGLSGLGTKVIEEDE* 453
KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEF+SLVTVAEIPAEGLSGLGTK+IEE++*
Sbjct: 61 KQIWSKGIRGPPRRIRVRVARKRNDDEDAKEEFFSLVTVAEIPAEGLSGLGTKIIEEED* 120
>TAIR9_protein||AT5G56710.2 | Symbols: | 60S ribosomal protein L31 (RPL31C) |
chr5:22944003-22944767 REVERSE
Length = 86
Score = 102 bits (252), Expect = 3e-022
Identities = 48/56 (85%), Positives = 51/56 (91%)
Frame = +1
Query: 94 MEKGKGRKEEIVTREYTINLHRRLHSCTFKKKAPNAIKEIRKFALKAMGTKDVRVD 261
M + KGRKEE++TREYTINLHRRLH CTFKKKAP AIKEIRKFA KAMGTKDVRVD
Sbjct: 1 MSEKKGRKEEVITREYTINLHRRLHKCTFKKKAPKAIKEIRKFAEKAMGTKDVRVD 56
Score = 57 bits (135), Expect = 1e-008
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Frame = +1
Query: 265 KLNKQIWSKGIRGPPRRIRVRVARKRNDDEDAK--EEFYSLVTVAEIPAEGLSGLGTKVI 438
+L+K + K + IR + A K +D + EEF+SLVTVAEIPAEGLSGLGTKVI
Sbjct: 23 RLHKCTFKKKAPKAIKEIR-KFAEKAMGTKDVRVDEEFFSLVTVAEIPAEGLSGLGTKVI 81
Query: 439 EEDE* 453
EE++*
Sbjct: 82 EEED* 86
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,524,927,668
Number of Sequences: 33410
Number of Extensions: 21524927668
Number of Successful Extensions: 675273654
Number of sequences better than 0.0: 0
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