BLASTX 7.6.2
Query= UN44495 /QuerySize=694
(693 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15228722|ref|NP_188870.1| DEAD-box ATP-dependent RNA helicase... 166 4e-039
gi|3775995|emb|CAA09200.1| RNA helicase [Arabidopsis thaliana] 166 4e-039
gi|22331253|ref|NP_188872.2| DEAD-box ATP-dependent RNA helicase... 162 6e-038
gi|297787958|ref|XP_002862173.1| hypothetical protein ARALYDRAFT... 161 8e-038
gi|297830946|ref|XP_002883355.1| hypothetical protein ARALYDRAFT... 160 2e-037
gi|297830944|ref|XP_002883354.1| hypothetical protein ARALYDRAFT... 139 5e-031
gi|78778398|ref|YP_396510.1| RNA-binding region RNP-1 (RNA recog... 82 5e-014
gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Se... 76 3e-012
gi|45533923|gb|AAS67333.1| glycine-rich RNA-binding protein RGP-... 76 4e-012
gi|158290317|ref|XP_563150.3| AGAP002965-PA [Anopheles gambiae s... 76 4e-012
gi|322703422|gb|EFY95031.1| cysteine-rich secreted protein [Meta... 76 4e-012
gi|221483341|gb|EEE21660.1| RNA recognition motif-containing pro... 75 7e-012
gi|344191286|gb|EGV45412.1| hypothetical protein IAM_21956 [Esch... 75 7e-012
gi|294996377|ref|ZP_06802068.1| hypothetical protein Mtub2_18219... 75 1e-011
gi|124806691|ref|XP_001350798.1| erythrocyte membrane protein 1,... 73 3e-011
gi|294996438|ref|ZP_06802129.1| hypothetical protein Mtub2_18524... 73 3e-011
>gi|15228722|ref|NP_188870.1| DEAD-box ATP-dependent RNA helicase 9 [Arabidopsis
thaliana]
Length = 610
Score = 166 bits (418), Expect = 4e-039
Identities = 99/156 (63%), Positives = 107/156 (68%), Gaps = 25/156 (16%)
Frame = +2
Query: 2 IHGPEQSRAVKMIEREVGSKFTELPSFPVERGSGSMFEGIGGRSGGSYGGGMRDRSSSYG 181
IHG +Q+RAVKMIE+EVGS+F ELPS VERGS SMFEG+G RSGGS+GGG R YG
Sbjct: 463 IHGQDQTRAVKMIEKEVGSRFNELPSIAVERGSASMFEGVGARSGGSFGGG-RSGGGGYG 521
Query: 182 ------GRSGG--YGGGG------GGGSGRYGGD-RSENRYSGGS--SSYGGGFGSGGSN 310
GRSGG YGG G GGG G YGG S +RYSGGS SS G FGSGGS+
Sbjct: 522 SYGSSSGRSGGGSYGGYGGSSGRSGGGGGSYGGSGGSSSRYSGGSDRSSGFGSFGSGGSS 581
Query: 311 NRSSGGFGGFGSDRSSQSSGRSSFGGFGLKDPNRSY 418
GGFGSDRSSQSSGRSSFGGFG D RSY
Sbjct: 582 -------GGFGSDRSSQSSGRSSFGGFGSNDGKRSY 610
>gi|3775995|emb|CAA09200.1| RNA helicase [Arabidopsis thaliana]
Length = 363
Score = 166 bits (418), Expect = 4e-039
Identities = 99/156 (63%), Positives = 107/156 (68%), Gaps = 25/156 (16%)
Frame = +2
Query: 2 IHGPEQSRAVKMIEREVGSKFTELPSFPVERGSGSMFEGIGGRSGGSYGGGMRDRSSSYG 181
IHG +Q+RAVKMIE+EVGS+F ELPS VERGS SMFEG+G RSGGS+GGG R YG
Sbjct: 216 IHGQDQTRAVKMIEKEVGSRFNELPSIAVERGSASMFEGVGARSGGSFGGG-RSGGGGYG 274
Query: 182 ------GRSGG--YGGGG------GGGSGRYGGD-RSENRYSGGS--SSYGGGFGSGGSN 310
GRSGG YGG G GGG G YGG S +RYSGGS SS G FGSGGS+
Sbjct: 275 SYGSSSGRSGGGSYGGYGGSSGRSGGGGGSYGGSGGSSSRYSGGSDRSSGFGSFGSGGSS 334
Query: 311 NRSSGGFGGFGSDRSSQSSGRSSFGGFGLKDPNRSY 418
GGFGSDRSSQSSGRSSFGGFG D RSY
Sbjct: 335 -------GGFGSDRSSQSSGRSSFGGFGSNDGKRSY 363
>gi|22331253|ref|NP_188872.2| DEAD-box ATP-dependent RNA helicase 53
[Arabidopsis thaliana]
Length = 616
Score = 162 bits (408), Expect = 6e-038
Identities = 90/132 (68%), Positives = 98/132 (74%), Gaps = 12/132 (9%)
Frame = +2
Query: 2 IHGPEQSRAVKMIEREVGSKFTELPSFPVERGSGSMFEGIGGRSGGSYGGGMRDRSSSYG 181
I+ +QSRAVK+IEREVGS+FTELPS VERGS SMFEGIG RSGGS+GGGMRDR SS+G
Sbjct: 451 IYSQDQSRAVKIIEREVGSRFTELPSIAVERGSASMFEGIGSRSGGSFGGGMRDRGSSFG 510
Query: 182 GRSGGYGGGGGGGSGRYGGDR---SENRYSGGSSSYGGGFGSGGSNNRSSGGFGGFGSDR 352
GRSG GGG GG SG YGG R S NRYSG S GFGS G + G+GSDR
Sbjct: 511 GRSG--GGGYGGSSGGYGGGRSGGSSNRYSGDSDR--SGFGSFGMRSPE-----GYGSDR 561
Query: 353 SSQSSGRSSFGG 388
SSQS GRSSFGG
Sbjct: 562 SSQSGGRSSFGG 573
Score = 103 bits (255), Expect = 3e-020
Identities = 67/117 (57%), Positives = 70/117 (59%), Gaps = 11/117 (9%)
Frame = +2
Query: 77 SFPVERGSGSMFEGIGGRSGGSYGGGMRDRSSS-YGGRS--GGYGGGGGGGSGRYGGDRS 247
SF G G G GG SGG YGGG SS+ Y G S G+G G YG DRS
Sbjct: 508 SFGGRSGGG----GYGGSSGG-YGGGRSGGSSNRYSGDSDRSGFGSFGMRSPEGYGSDRS 562
Query: 248 ENRYSGGSSSYGGGFGSGGSNNRSSGGFGGFGSDRSSQSSGRSSFGGFGLKDPNRSY 418
SGG SS+GGG G SNNRSS GFG FGSDRSSQS GRSSFGGFG D RSY
Sbjct: 563 SQ--SGGRSSFGGGRSGGSSNNRSS-GFGDFGSDRSSQSGGRSSFGGFGSNDGKRSY 616
>gi|297787958|ref|XP_002862173.1| hypothetical protein ARALYDRAFT_333427
[Arabidopsis lyrata subsp. lyrata]
Length = 283
Score = 161 bits (407), Expect = 8e-038
Identities = 93/140 (66%), Positives = 101/140 (72%), Gaps = 11/140 (7%)
Frame = +2
Query: 2 IHGPEQSRAVKMIEREVGSKFTELPSFPVERGSGSMFEGIGGRSGGSYGGGMRDRSSSYG 181
I+ +QSRAVK+IEREVGS+FTELPS VERGS SMFEGIG RSGGS+GGGMRDR SS+G
Sbjct: 113 IYSQDQSRAVKIIEREVGSRFTELPSIAVERGSASMFEGIGSRSGGSFGGGMRDRGSSFG 172
Query: 182 GRS-GGYGGGGGG-GSGRYGGDRSENRYSGGSSSYGGGFGSGGSNNRSSGGFGGFGSDRS 355
GRS GGYGG GG G GR GG S NRYSG S GFGS G + G+GSDRS
Sbjct: 173 GRSGGGYGGSSGGYGGGRSGG--SSNRYSGDSDR--SGFGSFGMRSPE-----GYGSDRS 223
Query: 356 SQSSGRSSFGGFGLKDPNRS 415
SQS GRSSFGG D RS
Sbjct: 224 SQSGGRSSFGGGRSGDYGRS 243
>gi|297830946|ref|XP_002883355.1| hypothetical protein ARALYDRAFT_479746
[Arabidopsis lyrata subsp. lyrata]
Length = 612
Score = 160 bits (404), Expect = 2e-037
Identities = 90/131 (68%), Positives = 98/131 (74%), Gaps = 11/131 (8%)
Frame = +2
Query: 2 IHGPEQSRAVKMIEREVGSKFTELPSFPVERGSGSMFEGIGGRSGGSYGGGMRDRSSSYG 181
I+ +QSRAVK+IEREVGS+FTELPS VERGS SMFEGIG RSGGS+GGGMRDR SS+G
Sbjct: 448 IYSQDQSRAVKIIEREVGSRFTELPSIAVERGSASMFEGIGSRSGGSFGGGMRDRGSSFG 507
Query: 182 GRS-GGYGGGGGG-GSGRYGGDRSENRYSGGSSSYGGGFGSGGSNNRSSGGFGGFGSDRS 355
GRS GGYGG GG G GR GG S NRYSG S GFGS G + G+GSDRS
Sbjct: 508 GRSGGGYGGSSGGYGGGRSGG--SSNRYSGDSDR--SGFGSFGMRSPE-----GYGSDRS 558
Query: 356 SQSSGRSSFGG 388
SQS GRSSFGG
Sbjct: 559 SQSGGRSSFGG 569
Score = 106 bits (262), Expect = 5e-021
Identities = 69/123 (56%), Positives = 70/123 (56%), Gaps = 24/123 (19%)
Frame = +2
Query: 92 RGSGSMFEGIGGRSGGSYGGGMRDRSSSY-GGRSGGYGGGGGGGSGR------------- 229
R GS F GGRSGG YGG S Y GGRSGG G S R
Sbjct: 500 RDRGSSF---GGRSGGGYGGS----SGGYGGGRSGGSSNRYSGDSDRSGFGSFGMRSPEG 552
Query: 230 YGGDRSENRYSGGSSSYGGGFGSGGSNNRSSGGFGGFGSDRSSQSSGRSSFGGFGLKDPN 409
YG DRS SGG SS+GGG G SNNRSS GFG FGSDRSSQS GRSSFGGFG D
Sbjct: 553 YGSDRSSQ--SGGRSSFGGGRSGGSSNNRSS-GFGDFGSDRSSQSGGRSSFGGFGSNDGK 609
Query: 410 RSY 418
RSY
Sbjct: 610 RSY 612
>gi|297830944|ref|XP_002883354.1| hypothetical protein ARALYDRAFT_479744
[Arabidopsis lyrata subsp. lyrata]
Length = 615
Score = 139 bits (348), Expect = 5e-031
Identities = 79/135 (58%), Positives = 84/135 (62%), Gaps = 8/135 (5%)
Frame = +2
Query: 2 IHGPEQSRAVKMIEREVGSKFTELPSFPVERGSGSMFEGIGGRSGGSYGGGMRDRSSSYG 181
IHG EQSRAVKMIE+EVGS+F ELPS VERGS SMFEG+G RSGGS+GGG
Sbjct: 467 IHGQEQSRAVKMIEKEVGSRFNELPSIAVERGSASMFEGVGARSGGSFGGGRSGGGYGGY 526
Query: 182 GRSGGYGGGGGGGSGRYGGDRSENRYSGGSSSYGGGFG-----SGGSNNRSS-GGFGGFG 343
G S G GGGGG G YGG S R GG SYG G SGGS+ S GGFG G
Sbjct: 527 GSSSGRSGGGGGSYGGYGG--SSGRSGGGGGSYGSSGGPSSRYSGGSDRSSGFGGFGSGG 584
Query: 344 SDRSSQSSGRSSFGG 388
SDRSS G S G
Sbjct: 585 SDRSSGGFGSSQSSG 599
>gi|78778398|ref|YP_396510.1| RNA-binding region RNP-1 (RNA recognition motif)
[Prochlorococcus marinus str. MIT 9312]
Length = 222
Score = 82 bits (202), Expect = 5e-014
Identities = 55/136 (40%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Frame = +2
Query: 53 GSKFTELPSFPVE------RGSGSMFEGIGGRSGGSYGGGMRDRSSSYGGRSGGYGGGGG 214
G + TEL P+ RGSG GGR GG+ GGG G GGYGGGGG
Sbjct: 61 GLQGTELMGRPLRINKAEPRGSGGSRR--GGRGGGNNGGGYGGGGYGGGNNGGGYGGGGG 118
Query: 215 GGSGRYGGDRSENRYSGGSSSY-----GGGFGSGG---SNNRSSGGFGGFGSDRSSQSSG 370
GG G YGG + Y GG Y GGG+G GG + GG+GG G+ S
Sbjct: 119 GGGGGYGGGNNGGGYGGGGGGYGGGNNGGGYGGGGGGYGGGNNGGGYGG-GNPEPKTSYT 177
Query: 371 RSSFGGFGLKDPNRSY 418
+S G G +D RSY
Sbjct: 178 NNSSGAEGWED--RSY 191
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia
sempervirens]
Length = 194
Score = 76 bits (186), Expect = 3e-012
Identities = 46/97 (47%), Positives = 48/97 (49%), Gaps = 17/97 (17%)
Frame = +2
Query: 95 GSGSMFEGIGGRSGG-------SYGGGMRDRSSSYGGRSGGYGGG----GGGGSGRYGGD 241
G G G GG GG YG G R GG GGYGGG GGGGSG YGG
Sbjct: 103 GGGGYRSGGGGYGGGGRERSERGYGNGGR------GGGGGGYGGGGSGYGGGGSGGYGGG 156
Query: 242 RSENRYSGGSSSYGGGFGSGGSNNRSSGGFGGFGSDR 352
S +RY GGS YGGG G GG + GG GS R
Sbjct: 157 GSGSRYGGGSGGYGGGAGGGGGSRYGGGGGASEGSWR 193
>gi|45533923|gb|AAS67333.1| glycine-rich RNA-binding protein RGP-1c [Nicotiana
sylvestris]
Length = 136
Score = 76 bits (185), Expect = 4e-012
Identities = 43/87 (49%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Frame = +2
Query: 92 RGSGSMFEGIGGR-SGGSYGGGMRDRSSSYGGRSGGYGGGGGGGSGRYGGDRSENRYSGG 268
RG G G GGR GG YGGG R+ YGG GGGG GG G YGG R E Y GG
Sbjct: 49 RGGG----GGGGRGGGGGYGGGRREGGGGYGGGRREGGGGGYGGGGGYGGGRREGGYGGG 104
Query: 269 SSSYGGGFGSGGSNNRSSGGFGGFGSD 349
YGGG +R S G GG SD
Sbjct: 105 GGGYGGGDRYNDGGSRYSRGGGGGASD 131
>gi|158290317|ref|XP_563150.3| AGAP002965-PA [Anopheles gambiae str. PEST]
Length = 212
Score = 76 bits (185), Expect = 4e-012
Identities = 45/100 (45%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +2
Query: 95 GSGSMFEGIGGRSGGSYGGGMRDRSSSYGGRSGGYGGGGGGGSGRYGGDRSENRYSGGSS 274
G G G GG GG GGG GG GG GGGGGGG G GG GG
Sbjct: 24 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 83
Query: 275 SYGGGFGSGGSNNRSSGGFGGFGSDRSSQSSGRSSFGGFG 394
GGG G GG GG G +GS RS+ SS R GG G
Sbjct: 84 GGGGGGGGGGGGGGGGGGVGAYGSVRST-SSDRGRGGGTG 122
>gi|322703422|gb|EFY95031.1| cysteine-rich secreted protein [Metarhizium
anisopliae ARSEF 23]
Length = 431
Score = 76 bits (185), Expect = 4e-012
Identities = 39/91 (42%), Positives = 44/91 (48%)
Frame = +2
Query: 116 GIGGRSGGSYGGGMRDRSSSYGGRSGGYGGGGGGGSGRYGGDRSENRYSGGSSSYGGGFG 295
G GG GG GGG D+S S GG GG GGGG G G GG GG GGG G
Sbjct: 144 GGGGGGGGGGGGGAGDKSGSSGGGGGGGGGGGNNGGGGGGGGGHNGGGGGGGGHNGGGGG 203
Query: 296 SGGSNNRSSGGFGGFGSDRSSQSSGRSSFGG 388
GG +N GG GG G +G++ G
Sbjct: 204 GGGGHNGGGGGGGGGGDGDEGNGNGKNPHNG 234
>gi|221483341|gb|EEE21660.1| RNA recognition motif-containing protein, putative
[Toxoplasma gondii GT1]
Length = 508
Score = 75 bits (183), Expect = 7e-012
Identities = 41/95 (43%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = +2
Query: 116 GIGGRSGGSYGGGMRDRSSSYGGRSGGYGGGG--GGGSGRYGGDRSENRYSGGSSSYGGG 289
G GG GG GG S YGG GGYGGGG GGG G GG Y GG+ YGGG
Sbjct: 277 GRGGFRGGMGRGGYGGHGSPYGG--GGYGGGGGYGGGGGYGGGGYGGGGYGGGNGGYGGG 334
Query: 290 FGSGGSNNRSSGGFGGFGSDRSSQSSGRSSFGGFG 394
G GG GG+G G +GG+G
Sbjct: 335 GNGGYGGGGYGGGNGGYGGGGGGYGGGGGGYGGYG 369
>gi|344191286|gb|EGV45412.1| hypothetical protein IAM_21956 [Escherichia coli
XH001]
Length = 184
Score = 75 bits (183), Expect = 7e-012
Identities = 44/107 (41%)
Frame = +2
Query: 95 GSGSMFEGIGGRSGGSYGGGMRDRSSSYGGRSGGYGGGGGGGSGRYGGDRSENRYSGGSS 274
G G G GG GG GGG GG GG GGGGGGG G GG GG
Sbjct: 75 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG 134
Query: 275 SYGGGFGSGGSNNRSSGGFGGFGSDRSSQSSGRSSFGGFGLKDPNRS 415
GGG G GG GG GG G G GG G D RS
Sbjct: 135 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGASDGGRS 181
>gi|294996377|ref|ZP_06802068.1| hypothetical protein Mtub2_18219 [Mycobacterium
tuberculosis 210]
Length = 165
Score = 75 bits (182), Expect = 1e-011
Identities = 42/100 (42%)
Frame = +2
Query: 95 GSGSMFEGIGGRSGGSYGGGMRDRSSSYGGRSGGYGGGGGGGSGRYGGDRSENRYSGGSS 274
G G G GG GG GGG GG GG GGGGGGG G GG R GG
Sbjct: 28 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGRGGGGGG 87
Query: 275 SYGGGFGSGGSNNRSSGGFGGFGSDRSSQSSGRSSFGGFG 394
GGG G GG GG GG G G GG G
Sbjct: 88 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGVG 127
Score = 74 bits (180), Expect = 2e-011
Identities = 42/100 (42%)
Frame = +2
Query: 95 GSGSMFEGIGGRSGGSYGGGMRDRSSSYGGRSGGYGGGGGGGSGRYGGDRSENRYSGGSS 274
G G G GG GG GGG GG GG GGGGGGG G GG GG
Sbjct: 8 GGGGAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGEGGGGGGGGG 67
Query: 275 SYGGGFGSGGSNNRSSGGFGGFGSDRSSQSSGRSSFGGFG 394
GGG G GG R GG GG G G GG G
Sbjct: 68 GGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGG 107
Score = 73 bits (178), Expect = 3e-011
Identities = 42/100 (42%)
Frame = +2
Query: 95 GSGSMFEGIGGRSGGSYGGGMRDRSSSYGGRSGGYGGGGGGGSGRYGGDRSENRYSGGSS 274
G G G GG GG GGG GG GG GGGGGGG GR GG GG
Sbjct: 37 GGGGGGGGGGGGGGGGGGGGGEGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGG 96
Query: 275 SYGGGFGSGGSNNRSSGGFGGFGSDRSSQSSGRSSFGGFG 394
GGG G GG GG GG G G GG G
Sbjct: 97 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGVGGGGGGGGGG 136
>gi|124806691|ref|XP_001350798.1| erythrocyte membrane protein 1, PfEMP1
[Plasmodium falciparum 3D7]
Length = 2359
Score = 73 bits (178), Expect = 3e-011
Identities = 44/101 (43%), Positives = 46/101 (45%), Gaps = 5/101 (4%)
Frame = +2
Query: 92 RGSGSMFEGIGGRSGGSYGGGMRDRSSSYGGRSGGYGGGGGGGSGRYGGDRSENRYSGGS 271
R GS +GG SGG G G S GG GG G GGGGGSG GG GG
Sbjct: 583 RSDGSSSVHVGGGSGGGGGSGGGGGSGGGGGSGGGGGSGGGGGSGGGGGSG-----GGGG 637
Query: 272 SSYGGGFGSGGSNNRSSGGFGGFGSDRSSQSSGRSSFGGFG 394
S GGG G GG + G GG GS S G GG G
Sbjct: 638 SGGGGGSGGGGGSGGGGGSGGGGGSGGGGGSGGGGGSGGGG 678
>gi|294996438|ref|ZP_06802129.1| hypothetical protein Mtub2_18524 [Mycobacterium
tuberculosis 210]
Length = 311
Score = 73 bits (178), Expect = 3e-011
Identities = 40/100 (40%), Positives = 44/100 (44%)
Frame = +2
Query: 95 GSGSMFEGIGGRSGGSYGGGMRDRSSSYGGRSGGYGGGGGGGSGRYGGDRSENRYSGGSS 274
G G+ GG GG+ G G + +GGR GG GGGGGGG G GG GG
Sbjct: 14 GRGAGGGAAGGGGGGAAGAGGAGGGAGWGGRGGGGGGGGGGGGGGGGGGGGGRGGGGGGG 73
Query: 275 SYGGGFGSGGSNNRSSGGFGGFGSDRSSQSSGRSSFGGFG 394
GGG G GG GG GG R G GG G
Sbjct: 74 GGGGGGGGGGGKREEEGGGGGGEGGRGGGGGGGRGGGGEG 113
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,837,552,758,913
Number of Sequences: 15229318
Number of Extensions: 4837552758913
Number of Successful Extensions: 1137592257
Number of sequences better than 0.0: 0
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